RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 PCDHA13Q9Y5I0 950 aa15.22■□□□□ 0.03
DDX55-202ENST00000354291 CACNA1CQ13936 2221 aa15.22■□□□□ 0.03
DDX55-202ENST00000354291 ABCA4P78363 2273 aa15.21■□□□□ 0.03
DDX55-202ENST00000354291 KLHL33A6NCF5 533 aa15.21■□□□□ 0.03
DDX55-202ENST00000354291 FANCGO15287 622 aa15.21■□□□□ 0.03
DDX55-202ENST00000354291 FAM155BO75949 473 aa15.21■□□□□ 0.03
DDX55-202ENST00000354291 EPOP01588 193 aa15.21■□□□□ 0.03
DDX55-202ENST00000354291 UQCRHP07919 91 aa15.21■□□□□ 0.03
DDX55-202ENST00000354291 PYGMP11217 842 aa15.21■□□□□ 0.03
DDX55-202ENST00000354291 PIM1P11309 404 aaPredicted RBP15.21■□□□□ 0.03
DDX55-202ENST00000354291 CYLC1P35663 651 aaPredicted RBP15.21■□□□□ 0.03
DDX55-202ENST00000354291 SLC25A41Q8N5S1 370 aa15.21■□□□□ 0.03
DDX55-202ENST00000354291 ZNF398Q8TD17 642 aa15.21■□□□□ 0.03
DDX55-202ENST00000354291 DTX3LQ8TDB6 740 aa15.21■□□□□ 0.03
DDX55-202ENST00000354291 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.21■□□□□ 0.03
DDX55-202ENST00000354291 HAS2Q92819 552 aa15.21■□□□□ 0.03
DDX55-202ENST00000354291 SPSB2Q99619 263 aa15.21■□□□□ 0.03
DDX55-202ENST00000354291 HGH1Q9BTY7 390 aa15.21■□□□□ 0.03
DDX55-202ENST00000354291 TRABDQ9H4I3 376 aa15.21■□□□□ 0.03
DDX55-202ENST00000354291 WDR54Q9H977 334 aa15.21■□□□□ 0.03
DDX55-202ENST00000354291 MRM3Q9HC36 420 aaKnown RBP15.21■□□□□ 0.03
DDX55-202ENST00000354291 GPAMQ9HCL2 828 aa15.21■□□□□ 0.03
DDX55-202ENST00000354291 PCM1Q15154 2024 aa15.21■□□□□ 0.02
DDX55-202ENST00000354291 hCG_1818297A0A087WSY0 165 aa15.2■□□□□ 0.02
DDX55-202ENST00000354291 C17orf113A0A1B0GUU1 675 aa15.2■□□□□ 0.02
DDX55-202ENST00000354291 LOC285095A0A1B0GVY8 99 aa15.2■□□□□ 0.02
DDX55-202ENST00000354291 HACD1B0YJ81 288 aa15.2■□□□□ 0.02
DDX55-202ENST00000354291 IFRD1O00458 451 aaPredicted RBP15.2■□□□□ 0.02
DDX55-202ENST00000354291 ALBP02768 609 aa15.2■□□□□ 0.02
DDX55-202ENST00000354291 PECAM1P16284 738 aaPredicted RBP15.2■□□□□ 0.02
DDX55-202ENST00000354291 UGT2B7P16662 529 aa15.2■□□□□ 0.02
DDX55-202ENST00000354291 ITGAXP20702 1163 aa15.2■□□□□ 0.02
DDX55-202ENST00000354291 CD68P34810 354 aaPredicted RBP15.2■□□□□ 0.02
DDX55-202ENST00000354291 WASHC5Q12768 1159 aa15.2■□□□□ 0.02
DDX55-202ENST00000354291 SLC5A12Q1EHB4 618 aa15.2■□□□□ 0.02
DDX55-202ENST00000354291 C11orf63Q6NUN7 778 aa15.2■□□□□ 0.02
DDX55-202ENST00000354291 NCCRP1Q6ZVX7 275 aaPredicted RBP15.2■□□□□ 0.02
DDX55-202ENST00000354291 PID1Q7Z2X4 250 aa15.2■□□□□ 0.02
DDX55-202ENST00000354291 CCDC50Q8IVM0 306 aa15.2■□□□□ 0.02
DDX55-202ENST00000354291 KBTBD2Q8IY47 623 aa15.2■□□□□ 0.02
DDX55-202ENST00000354291 DNAJC22Q8N4W6 341 aa15.2■□□□□ 0.02
DDX55-202ENST00000354291 SIRT6Q8N6T7 355 aa15.2■□□□□ 0.02
DDX55-202ENST00000354291 BLOC1S5Q8TDH9 187 aa15.2■□□□□ 0.02
DDX55-202ENST00000354291 BRIX1Q8TDN6 353 aaKnown RBP15.2■□□□□ 0.02
DDX55-202ENST00000354291 DLG3Q92796 817 aa15.2■□□□□ 0.02
DDX55-202ENST00000354291 FKBP10Q96AY3 582 aa15.2■□□□□ 0.02
DDX55-202ENST00000354291 CALR3Q96L12 384 aaKnown RBP15.2■□□□□ 0.02
DDX55-202ENST00000354291 OR2A14Q96R47 310 aa15.2■□□□□ 0.02
DDX55-202ENST00000354291 GSX1Q9H4S2 264 aaPredicted RBP15.2■□□□□ 0.02
DDX55-202ENST00000354291 KLHL8Q9P2G9 620 aaPredicted RBP15.2■□□□□ 0.02
DDX55-202ENST00000354291 PLCL2Q9UPR0 1127 aa15.2■□□□□ 0.02
DDX55-202ENST00000354291 PKP3Q9Y446 797 aa15.2■□□□□ 0.02
DDX55-202ENST00000354291 GAPDHSO14556 408 aaPredicted RBP15.19■□□□□ 0.02
DDX55-202ENST00000354291 USP1O94782 785 aa15.19■□□□□ 0.02
DDX55-202ENST00000354291 HPP00738 406 aa15.19■□□□□ 0.02
DDX55-202ENST00000354291 WNT3AP56704 352 aa15.19■□□□□ 0.02
DDX55-202ENST00000354291 PTPRCAPQ14761 206 aa15.19■□□□□ 0.02
DDX55-202ENST00000354291 BCL7AQ4VC05 210 aa15.19■□□□□ 0.02
DDX55-202ENST00000354291 SUN3Q8TAQ9 357 aa15.19■□□□□ 0.02
DDX55-202ENST00000354291 HM13Q8TCT9 377 aa15.19■□□□□ 0.02
DDX55-202ENST00000354291 C8orf44Q96CB5 159 aa15.19■□□□□ 0.02
DDX55-202ENST00000354291 DCUN1D1Q96GG9 259 aa15.19■□□□□ 0.02
DDX55-202ENST00000354291 MAGED4Q96JG8 741 aa15.19■□□□□ 0.02
DDX55-202ENST00000354291 LINC00615Q96LM1 132 aaPredicted RBP15.19■□□□□ 0.02
DDX55-202ENST00000354291 FCRL5Q96RD9 977 aa15.19■□□□□ 0.02
DDX55-202ENST00000354291 FERMT1Q9BQL6 677 aa15.19■□□□□ 0.02
DDX55-202ENST00000354291 ENKD1Q9H0I2 346 aa15.19■□□□□ 0.02
DDX55-202ENST00000354291 GOLPH3Q9H4A6 298 aa15.19■□□□□ 0.02
DDX55-202ENST00000354291 MVB12BQ9H7P6 319 aa15.19■□□□□ 0.02
DDX55-202ENST00000354291 SPHK1Q9NYA1 384 aa15.19■□□□□ 0.02
DDX55-202ENST00000354291 HACD3Q9P035 362 aa15.19■□□□□ 0.02
DDX55-202ENST00000354291 CTSFQ9UBX1 484 aa15.19■□□□□ 0.02
DDX55-202ENST00000354291 TRHDEQ9UKU6 1024 aa15.19■□□□□ 0.02
DDX55-202ENST00000354291 MRPS2Q9Y399 296 aaKnown RBP15.19■□□□□ 0.02
DDX55-202ENST00000354291 A0A1B0GX78 115 aa15.18■□□□□ 0.02
DDX55-202ENST00000354291 SGTAO43765 313 aa15.18■□□□□ 0.02
DDX55-202ENST00000354291 NFKB1P19838 968 aa15.18■□□□□ 0.02
DDX55-202ENST00000354291 OR1D4P47884 311 aa15.18■□□□□ 0.02
DDX55-202ENST00000354291 ARSFP54793 590 aa15.18■□□□□ 0.02
DDX55-202ENST00000354291 COPS2P61201 443 aa15.18■□□□□ 0.02
DDX55-202ENST00000354291 PMP22Q01453 160 aa15.18■□□□□ 0.02
DDX55-202ENST00000354291 MPP3Q13368 585 aa15.18■□□□□ 0.02
DDX55-202ENST00000354291 KDELC1Q6UW63 502 aa15.18■□□□□ 0.02
DDX55-202ENST00000354291 UNC5AQ6ZN44 842 aa15.18■□□□□ 0.02
DDX55-202ENST00000354291 BBS12Q6ZW61 710 aa15.18■□□□□ 0.02
DDX55-202ENST00000354291 GLT6D1Q7Z4J2 308 aa15.18■□□□□ 0.02
DDX55-202ENST00000354291 TGIF2LYQ8IUE0 185 aa15.18■□□□□ 0.02
DDX55-202ENST00000354291 PRSS58Q8IYP2 241 aa15.18■□□□□ 0.02
DDX55-202ENST00000354291 ZNF567Q8N184 647 aa15.18■□□□□ 0.02
DDX55-202ENST00000354291 METTL27Q8N6F8 245 aaPredicted RBP15.18■□□□□ 0.02
DDX55-202ENST00000354291 PANX2Q96RD6 677 aa15.18■□□□□ 0.02
DDX55-202ENST00000354291 CRB3Q9BUF7 120 aa15.18■□□□□ 0.02
DDX55-202ENST00000354291 CHRNA10Q9GZZ6 450 aa15.18■□□□□ 0.02
DDX55-202ENST00000354291 EURLQ9NYK6 297 aa15.18■□□□□ 0.02
DDX55-202ENST00000354291 ICKQ9UPZ9 632 aa15.18■□□□□ 0.02
DDX55-202ENST00000354291 MEMO1Q9Y316 297 aa15.18■□□□□ 0.02
DDX55-202ENST00000354291 NCOA6Q14686 2063 aaPredicted RBP15.17■□□□□ 0.02
DDX55-202ENST00000354291 A0A0J9YY10 115 aa15.17■□□□□ 0.02
DDX55-202ENST00000354291 FAM227AF5H4B4 570 aa15.17■□□□□ 0.02
DDX55-202ENST00000354291 APOC4-APOC2K7ER74 178 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms