RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 OVCA2Q8WZ82 227 aa23.95■■□□□ 1.42
CPNE1-202ENST00000352393 ULK4Q96C45 1275 aa23.95■■□□□ 1.42
CPNE1-202ENST00000352393 ALPK1Q96QP1 1244 aa23.95■■□□□ 1.42
CPNE1-202ENST00000352393 WDR12Q9GZL7 423 aaKnown RBP23.95■■□□□ 1.42
CPNE1-202ENST00000352393 CCDC90BQ9GZT6 254 aa23.95■■□□□ 1.42
CPNE1-202ENST00000352393 ASB8Q9H765 288 aa23.95■■□□□ 1.42
CPNE1-202ENST00000352393 HMG20AQ9NP66 347 aa23.95■■□□□ 1.42
CPNE1-202ENST00000352393 HCSTQ9UBK5 93 aa23.95■■□□□ 1.42
CPNE1-202ENST00000352393 INTS6Q9UL03 887 aaKnown RBP23.95■■□□□ 1.42
CPNE1-202ENST00000352393 DLGAP4Q9Y2H0 992 aa23.95■■□□□ 1.42
CPNE1-202ENST00000352393 FCF1Q9Y324 198 aaKnown RBP23.95■■□□□ 1.42
CPNE1-202ENST00000352393 CPQQ9Y646 472 aa23.95■■□□□ 1.42
CPNE1-202ENST00000352393 H7C4K7 107 aa23.94■■□□□ 1.42
CPNE1-202ENST00000352393 ARHGEF15O94989 841 aa23.94■■□□□ 1.42
CPNE1-202ENST00000352393 ANGPTL1O95841 491 aa23.94■■□□□ 1.42
CPNE1-202ENST00000352393 MZF1P28698 734 aaPredicted RBP23.94■■□□□ 1.42
CPNE1-202ENST00000352393 CLDN8P56748 225 aa23.94■■□□□ 1.42
CPNE1-202ENST00000352393 IL5RAQ01344 420 aa23.94■■□□□ 1.42
CPNE1-202ENST00000352393 OXA1LQ15070 435 aa23.94■■□□□ 1.42
CPNE1-202ENST00000352393 ARMC12Q5T9G4 340 aa23.94■■□□□ 1.42
CPNE1-202ENST00000352393 LRRC8DQ7L1W4 858 aa23.94■■□□□ 1.42
CPNE1-202ENST00000352393 TMEM132CQ8N3T6 1108 aa23.94■■□□□ 1.42
CPNE1-202ENST00000352393 MCOLN3Q8TDD5 553 aa23.94■■□□□ 1.42
CPNE1-202ENST00000352393 VMP1Q96GC9 406 aa23.94■■□□□ 1.42
CPNE1-202ENST00000352393 INPP5KQ9BT40 448 aa23.94■■□□□ 1.42
CPNE1-202ENST00000352393 TRNAU1APQ9NX07 287 aaKnown RBP23.94■■□□□ 1.42
CPNE1-202ENST00000352393 TMEM221A6NGB7 291 aa23.93■■□□□ 1.42
CPNE1-202ENST00000352393 KPNA4O00629 521 aaPredicted RBP23.93■■□□□ 1.42
CPNE1-202ENST00000352393 ITGALP20701 1170 aa23.93■■□□□ 1.42
CPNE1-202ENST00000352393 ACRV1P26436 265 aa23.93■■□□□ 1.42
CPNE1-202ENST00000352393 CCND3P30281 292 aaPredicted RBP23.93■■□□□ 1.42
CPNE1-202ENST00000352393 ABHD18Q0P651 414 aa23.93■■□□□ 1.42
CPNE1-202ENST00000352393 CRHR2Q13324 411 aa23.93■■□□□ 1.42
CPNE1-202ENST00000352393 MBOAT1Q6ZNC8 495 aa23.93■■□□□ 1.42
CPNE1-202ENST00000352393 B3GNT8Q7Z7M8 397 aa23.93■■□□□ 1.42
CPNE1-202ENST00000352393 CYP4Z1Q86W10 505 aa23.93■■□□□ 1.42
CPNE1-202ENST00000352393 RNF168Q8IYW5 571 aaPredicted RBP23.93■■□□□ 1.42
CPNE1-202ENST00000352393 SETD9Q8NE22 299 aa23.93■■□□□ 1.42
CPNE1-202ENST00000352393 MROQ9BYG7 248 aa23.93■■□□□ 1.42
CPNE1-202ENST00000352393 ARHGAP39Q9C0H5 1083 aa23.93■■□□□ 1.42
CPNE1-202ENST00000352393 MTRRQ9UBK8 725 aa23.93■■□□□ 1.42
CPNE1-202ENST00000352393 THSD7BQ9C0I4 1608 aa23.93■■□□□ 1.42
CPNE1-202ENST00000352393 SLC22A1O15245 554 aa23.93■■□□□ 1.42
CPNE1-202ENST00000352393 IRF1P10914 325 aa23.93■■□□□ 1.42
CPNE1-202ENST00000352393 JUNDP17535 347 aa23.93■■□□□ 1.42
CPNE1-202ENST00000352393 EPORP19235 508 aa23.93■■□□□ 1.42
CPNE1-202ENST00000352393 GATMP50440 423 aa23.93■■□□□ 1.42
CPNE1-202ENST00000352393 TRIM16LQ309B1 348 aa23.93■■□□□ 1.42
CPNE1-202ENST00000352393 CAPN13Q6MZZ7 669 aaPredicted RBP23.93■■□□□ 1.42
CPNE1-202ENST00000352393 PRSS55Q6UWB4 352 aaPredicted RBP23.93■■□□□ 1.42
CPNE1-202ENST00000352393 MACC1Q6ZN28 852 aa23.93■■□□□ 1.42
CPNE1-202ENST00000352393 ZDHHC21Q8IVQ6 265 aa23.93■■□□□ 1.42
CPNE1-202ENST00000352393 ITCHQ96J02 903 aa23.93■■□□□ 1.42
CPNE1-202ENST00000352393 IL26Q9NPH9 171 aa23.93■■□□□ 1.42
CPNE1-202ENST00000352393 ADAM23O75077 832 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 FTH1P02794 183 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 COL6A1P12109 1028 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 MYCLP1P12525 358 aaPredicted RBP23.92■■□□□ 1.42
CPNE1-202ENST00000352393 CD6P30203 668 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 S100A3P33764 101 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 ZNF157P51786 506 aaPredicted RBP23.92■■□□□ 1.42
CPNE1-202ENST00000352393 CARD16Q5EG05 197 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 ANKS3Q6ZW76 656 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 SLCO6A1Q86UG4 719 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 HOMEZQ8IX15 550 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 OR10Q1Q8NGQ4 319 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 ITPKCQ96DU7 683 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 BARD1Q99728 777 aaKnown RBP23.92■■□□□ 1.42
CPNE1-202ENST00000352393 DUSP21Q9H596 190 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 RMND5AQ9H871 391 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 PARVBQ9HBI1 364 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 INIPQ9NRY2 104 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 ERVK-18Q9QC07 812 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 ERVW-1Q9UQF0 538 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 ADAM12O43184 909 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 STK16O75716 305 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 CLDN9O95484 217 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 KRT6AP02538 564 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 KRT6BP04259 564 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 GSNP06396 782 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 BMP1P13497 986 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 CDKN2CP42773 168 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 KRT6CP48668 564 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 AP1S1P61966 158 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 SLC35A2P78381 396 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 KEAP1Q14145 624 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 TAS1R1Q7RTX1 841 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 ZNF551Q7Z340 670 aaPredicted RBP23.92■■□□□ 1.42
CPNE1-202ENST00000352393 GALNT5Q7Z7M9 940 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 PCSK9Q8NBP7 692 aaKnown RBP23.92■■□□□ 1.42
CPNE1-202ENST00000352393 OR7A2PQ8NGA2 310 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 RORBQ92753 470 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 YIPF6Q96EC8 236 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 CASD1Q96PB1 797 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 C19orf43Q9BQ61 176 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 ZFYVE1Q9HBF4 777 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 PAIP2BQ9ULR5 123 aaKnown RBP23.92■■□□□ 1.42
CPNE1-202ENST00000352393 PPT2Q9UMR5 302 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 PCDHGA10Q9Y5H3 936 aa23.92■■□□□ 1.42
CPNE1-202ENST00000352393 HSPE1-MOB4S4R3N1 261 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms