RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 ELOVL7A1L3X0 281 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 TMEM202A6NGA9 273 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 HIDE1A8MVS5 230 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 ALPLP05186 524 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 C8GP07360 202 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 TYRP14679 529 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 HOXB9P17482 250 aaPredicted RBP15.04■□□□□ -0
UPF3B-202ENST00000345865 SDC1P18827 310 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 CDKN2CP42773 168 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 MTHFRP42898 656 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 YAP1P46937 504 aaKnown RBP15.04■□□□□ -0
UPF3B-202ENST00000345865 GZMMP51124 257 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 CLDN8P56748 225 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 ERVFC1P60507 584 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 CHRNB3Q05901 458 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 LAPTM5Q13571 262 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 TEAD2Q15562 447 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 C11orf91Q3C1V1 193 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 ANKRD34AQ69YU3 496 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 CCDC149Q6ZUS6 474 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 Q6ZVL8 140 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 LRRC70Q7Z2Q7 622 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 HS3ST5Q8IZT8 346 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 ADAMTS16Q8TE57 1224 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 CEP44Q9C0F1 390 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 TUBA8Q9NY65 449 aaPredicted RBP15.04■□□□□ -0
UPF3B-202ENST00000345865 LIMD1Q9UGP4 676 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 HEMK1Q9Y5R4 338 aaPredicted RBP15.04■□□□□ -0
UPF3B-202ENST00000345865 EIF3FO00303 357 aaPredicted RBP15.04■□□□□ -0
UPF3B-202ENST00000345865 DEAF1O75398 565 aaPredicted RBP15.04■□□□□ -0
UPF3B-202ENST00000345865 TRMUO75648 421 aaKnown RBP15.04■□□□□ -0
UPF3B-202ENST00000345865 CDK9P50750 372 aaKnown RBP15.04■□□□□ -0
UPF3B-202ENST00000345865 CREMQ03060 361 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 GGTA1PQ4G0N0 100 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 ABRAXAS1Q6UWZ7 409 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 LPCAT2Q7L5N7 544 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 CHST15Q7LFX5 561 aaPredicted RBP15.04■□□□□ -0
UPF3B-202ENST00000345865 ZNF551Q7Z340 670 aaPredicted RBP15.04■□□□□ -0
UPF3B-202ENST00000345865 NECAB2Q7Z6G3 386 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 ELMOD1Q8N336 334 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 L3MBTL4Q8NA19 623 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 TNIP2Q8NFZ5 429 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 CYB5D2Q8WUJ1 264 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 FOXJ1Q92949 421 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 IRF7Q92985 503 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 HIC2Q96JB3 615 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 CRISPLD2Q9H0B8 497 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 ELOVL6Q9H5J4 265 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 LTB4R2Q9NPC1 389 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 INVSQ9Y283 1065 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 CXCR6O00574 342 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 GSTA4O15217 222 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 PRKD3O94806 890 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 LRATO95237 230 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 HIST1H2AGP0C0S8 130 aaPredicted RBP15.03■□□□□ -0
UPF3B-202ENST00000345865 HIST1H2ADP20671 130 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 ETV3P41162 512 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 ALDH3A2P51648 485 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 PFN3P60673 137 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 PPP1R8Q12972 351 aaKnown RBP15.03■□□□□ -0
UPF3B-202ENST00000345865 RBBP5Q15291 538 aaKnown RBP15.03■□□□□ -0
UPF3B-202ENST00000345865 LRRC26Q2I0M4 334 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 LRIF1Q5T3J3 769 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 STK32CQ86UX6 486 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 CALHM3Q86XJ0 350 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 AADATQ8N5Z0 425 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 NAT16Q8N8M0 369 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 GFM2Q969S9 779 aaKnown RBP15.03■□□□□ -0
UPF3B-202ENST00000345865 HIST1H2AHQ96KK5 128 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 MUS81Q96NY9 551 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 HIST1H2AJQ99878 128 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 CPPED1Q9BRF8 314 aaPredicted RBP15.03■□□□□ -0
UPF3B-202ENST00000345865 H2AFJQ9BTM1 129 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 GPRC5BQ9NZH0 403 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 FAM8A1Q9UBU6 413 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 OR2AG2A6NM03 316 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 FADS2P1A8MWK0 482 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 TTC34A8MYJ7 566 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 UPK3BL1B0FP48 263 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 WASH3PC4AMC7 463 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 UPK3BL2E5RIL1 263 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 LEFTY1O75610 366 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 ARHGEF15O94989 841 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 ADH1AP07327 375 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 MPC1LP0DKB6 136 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 CD22P20273 847 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 SHMT2P34897 504 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 SLC14A1Q13336 389 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 DAG1Q14118 895 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 PON2Q15165 354 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 LY6G5CQ5SRR4 150 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 MICU2Q8IYU8 434 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 ALDH16A1Q8IZ83 802 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 NETO1Q8TDF5 533 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 FRS2Q8WU20 508 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 NPLQ9BXD5 320 aaPredicted RBP15.03■□□□□ -0
UPF3B-202ENST00000345865 FAM83DQ9H4H8 585 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 SMURF2Q9HAU4 748 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 SNX6Q9UNH7 406 aa15.03■□□□□ -0
UPF3B-202ENST00000345865 PLXNA2O75051 1894 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms