RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 EBF4Q9BQW3 602 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 C1QTNF3Q9BXJ4 246 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 COG4Q9H9E3 785 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 KCTD5Q9NXV2 234 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 PRSS21Q9Y6M0 314 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 NAV2Q8IVL1 2488 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 A0A1W2PNU3 283 aaPredicted RBP13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 IQCF5A8MTL0 148 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 PYCARD-AS1I3L0S3 204 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 CDC7O00311 574 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 DIAPH2O60879 1101 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 AP2A2O94973 939 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 SLC25A14O95258 325 aaPredicted RBP13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 ENO3P13929 434 aaPredicted RBP13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 ADRB3P13945 408 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 AKT1P31749 480 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 KCNC1P48547 511 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 DUSP3P51452 185 aaPredicted RBP13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 ISXQ2M1V0 245 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 UNC50Q53HI1 259 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 LDLRAP1Q5SW96 308 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 PIP5KL1Q5T9C9 394 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 Q6ZVL8 140 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 GPSM1Q86YR5 675 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 SPNS2Q8IVW8 549 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 CLDN19Q8N6F1 224 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 OR13H1Q8NG92 308 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 DTD2Q96FN9 168 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 DCUN1D1Q96GG9 259 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 COQ10AQ96MF6 247 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 HDAC8Q9BY41 377 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 NMUR2Q9GZQ4 415 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 CAAP1Q9H8G2 361 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 CD84Q9UIB8 345 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 ZDHHC2Q9UIJ5 367 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 IKZF3Q9UKT9 509 aa13.17□□□□□ -0.3
HERPUD1-202ENST00000344114 TRPC5OSA6NMA1 111 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 AREL1O15033 823 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 SCAMP1O15126 338 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 KPNA5O15131 536 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 SLC31A1O15431 190 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 SPINT1O43278 529 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 SNX2O60749 519 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 SUPT7LO94864 414 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 S100BP04271 92 aaPredicted RBP13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 RPS17P08708 135 aaKnown RBP13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 MYF5P13349 255 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 ATP1B2P14415 290 aaPredicted RBP13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 ETV3P41162 512 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 CCR10P46092 362 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 ALDH18A1P54886 795 aaKnown RBP13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 B4GALNT1Q00973 533 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 ACOX1Q15067 660 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 PFKFB4Q16877 469 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 TMEM52BQ4KMG9 183 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 SH2D4BQ5SQS7 431 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 METTL21CQ5VZV1 264 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 GCNT7Q6ZNI0 430 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 ACAD11Q709F0 780 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 FRA10AC1Q70Z53 315 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 ERN2Q76MJ5 926 aaKnown RBP13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 ABI3BPQ7Z7G0 1075 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 CUZD1Q86UP6 607 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 SLC22A18ASQ8N1D0 253 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 PRR11Q96HE9 360 aaPredicted RBP13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 SLC46A1Q96NT5 459 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 MYOCQ99972 504 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 CCDC28BQ9BUN5 200 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 DUSP23Q9BVJ7 150 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 ABCG8Q9H221 673 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 GPR27Q9NS67 375 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 EVA1BQ9NVM1 165 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 LNPEPQ9UIQ6 1025 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 SATB2Q9UPW6 733 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 CDYLQ9Y232 598 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 CAPN7Q9Y6W3 813 aa13.16□□□□□ -0.3
HERPUD1-202ENST00000344114 A0A1W2PQU0 124 aa13.15□□□□□ -0.3
HERPUD1-202ENST00000344114 CDRT15L2A8MXV6 281 aa13.15□□□□□ -0.3
HERPUD1-202ENST00000344114 H0YHG0 523 aa13.15□□□□□ -0.3
HERPUD1-202ENST00000344114 K7ESM1 405 aa13.15□□□□□ -0.3
HERPUD1-202ENST00000344114 RAD51BO15315 384 aa13.15□□□□□ -0.3
HERPUD1-202ENST00000344114 GRID2O43424 1007 aa13.15□□□□□ -0.3
HERPUD1-202ENST00000344114 SLC28A2O43868 658 aa13.15□□□□□ -0.3
HERPUD1-202ENST00000344114 FTH1P02794 183 aa13.15□□□□□ -0.3
HERPUD1-202ENST00000344114 GM2AP17900 193 aa13.15□□□□□ -0.3
HERPUD1-202ENST00000344114 ITGB6P18564 788 aa13.15□□□□□ -0.3
HERPUD1-202ENST00000344114 MSH3P20585 1137 aa13.15□□□□□ -0.3
HERPUD1-202ENST00000344114 HNRNPA2B1P22626 353 aaKnown RBP13.15□□□□□ -0.3
HERPUD1-202ENST00000344114 CALB2P22676 271 aa13.15□□□□□ -0.3
HERPUD1-202ENST00000344114 EEF1DP29692 281 aaKnown RBP13.15□□□□□ -0.3
HERPUD1-202ENST00000344114 AKT2P31751 481 aa13.15□□□□□ -0.3
HERPUD1-202ENST00000344114 GBX1Q14549 363 aa13.15□□□□□ -0.3
HERPUD1-202ENST00000344114 C3orf38Q5JPI3 329 aa13.15□□□□□ -0.3
HERPUD1-202ENST00000344114 PLEKHS1Q5SXH7 462 aa13.15□□□□□ -0.3
HERPUD1-202ENST00000344114 ANKS6Q68DC2 871 aa13.15□□□□□ -0.3
HERPUD1-202ENST00000344114 HORMAD1Q86X24 394 aa13.15□□□□□ -0.3
HERPUD1-202ENST00000344114 FAM174AQ8TBP5 190 aa13.15□□□□□ -0.3
HERPUD1-202ENST00000344114 IFI44Q8TCB0 444 aa13.15□□□□□ -0.3
HERPUD1-202ENST00000344114 AGR3Q8TD06 166 aa13.15□□□□□ -0.3
HERPUD1-202ENST00000344114 MAPK15Q8TD08 544 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms