RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 KCNA7Q96RP8 456 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 GFM1Q96RP9 751 aaKnown RBP13.47□□□□□ -0.25
RTN4-202ENST00000337526 TRIT1Q9H3H1 467 aaKnown RBP13.47□□□□□ -0.25
RTN4-202ENST00000337526 TXNRD2Q9NNW7 524 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 SNX7Q9UNH6 387 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 NRXN3Q9Y4C0 1643 aa13.46□□□□□ -0.25
RTN4-202ENST00000337526 IFT172Q9UG01 1749 aa13.46□□□□□ -0.25
RTN4-202ENST00000337526 CLIC3O95833 236 aa13.46□□□□□ -0.25
RTN4-202ENST00000337526 NT5EP21589 574 aa13.46□□□□□ -0.25
RTN4-202ENST00000337526 FAUP35544 74 aaKnown RBP13.46□□□□□ -0.25
RTN4-202ENST00000337526 ALDH3A2P51648 485 aa13.46□□□□□ -0.25
RTN4-202ENST00000337526 TNFAIP8L3Q5GJ75 292 aa13.46□□□□□ -0.25
RTN4-202ENST00000337526 SNX33Q8WV41 574 aa13.46□□□□□ -0.25
RTN4-202ENST00000337526 FLRT1Q9NZU1 646 aa13.46□□□□□ -0.25
RTN4-202ENST00000337526 PCDHGA4Q9Y5G9 962 aa13.46□□□□□ -0.25
RTN4-202ENST00000337526 A0A0U1RQF3 1178 aa13.46□□□□□ -0.25
RTN4-202ENST00000337526 A0A1W2PPW3 197 aa13.46□□□□□ -0.25
RTN4-202ENST00000337526 RIIAD1A6NNX1 92 aa13.46□□□□□ -0.25
RTN4-202ENST00000337526 HTRA2O43464 458 aaPredicted RBP13.46□□□□□ -0.25
RTN4-202ENST00000337526 TLL1O43897 1013 aa13.46□□□□□ -0.25
RTN4-202ENST00000337526 BCAP31P51572 246 aa13.46□□□□□ -0.25
RTN4-202ENST00000337526 PPP2R2BQ00005 443 aa13.46□□□□□ -0.25
RTN4-202ENST00000337526 GANABQ14697 944 aaKnown RBP13.46□□□□□ -0.25
RTN4-202ENST00000337526 RNASE11Q8TAA1 199 aaKnown RBP13.46□□□□□ -0.25
RTN4-202ENST00000337526 C12orf43Q96C57 262 aaKnown RBP13.46□□□□□ -0.25
RTN4-202ENST00000337526 PPP1R14BQ96C90 147 aa13.46□□□□□ -0.25
RTN4-202ENST00000337526 SUV39H2Q9H5I1 410 aa13.46□□□□□ -0.25
RTN4-202ENST00000337526 DNAAF2Q9NVR5 837 aaKnown RBP13.46□□□□□ -0.25
RTN4-202ENST00000337526 SLC22A14Q9Y267 594 aa13.46□□□□□ -0.25
RTN4-202ENST00000337526 CFL2Q9Y281 166 aa13.46□□□□□ -0.25
RTN4-202ENST00000337526 RNASEH2AO75792 299 aaKnown RBP13.46□□□□□ -0.26
RTN4-202ENST00000337526 FGF19O95750 216 aa13.46□□□□□ -0.26
RTN4-202ENST00000337526 CLCN4P51793 760 aa13.46□□□□□ -0.26
RTN4-202ENST00000337526 UBXN11Q5T124 520 aa13.46□□□□□ -0.26
RTN4-202ENST00000337526 LGI4Q8N135 537 aa13.46□□□□□ -0.26
RTN4-202ENST00000337526 C2CD4AQ8NCU7 369 aaPredicted RBP13.46□□□□□ -0.26
RTN4-202ENST00000337526 FAM110BQ8TC76 370 aa13.46□□□□□ -0.26
RTN4-202ENST00000337526 IL4I1Q96RQ9 567 aa13.46□□□□□ -0.26
RTN4-202ENST00000337526 MIPEPQ99797 713 aa13.46□□□□□ -0.26
RTN4-202ENST00000337526 DCSTAMPQ9H295 470 aa13.46□□□□□ -0.26
RTN4-202ENST00000337526 ANKRA2Q9H9E1 313 aa13.46□□□□□ -0.26
RTN4-202ENST00000337526 MAGEE1Q9HCI5 957 aa13.46□□□□□ -0.26
RTN4-202ENST00000337526 ZCCHC3Q9NUD5 404 aaKnown RBP13.46□□□□□ -0.26
RTN4-202ENST00000337526 ZDHHC3Q9NYG2 299 aa13.46□□□□□ -0.26
RTN4-202ENST00000337526 MOCS1Q9NZB8 636 aa13.46□□□□□ -0.26
RTN4-202ENST00000337526 CALML5Q9NZT1 146 aa13.46□□□□□ -0.26
RTN4-202ENST00000337526 FZD4Q9ULV1 537 aa13.46□□□□□ -0.26
RTN4-202ENST00000337526 DHRS7Q9Y394 339 aa13.46□□□□□ -0.26
RTN4-202ENST00000337526 LOC730098B7Z3J9 87 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 BHMG1C9JSJ3 638 aaPredicted RBP13.45□□□□□ -0.26
RTN4-202ENST00000337526 SAP18O00422 153 aaKnown RBP13.45□□□□□ -0.26
RTN4-202ENST00000337526 CLK3P49761 638 aaKnown RBP13.45□□□□□ -0.26
RTN4-202ENST00000337526 AP1S2P56377 157 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 ADAM17P78536 824 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 E2F2Q14209 437 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 CHRNA6Q15825 494 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 ALG11Q2TAA5 492 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 SPANXN4Q5MJ08 99 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 DERL2Q9GZP9 239 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 MED28Q9H204 178 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 KCNN2Q9H2S1 579 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 NSUN3Q9H649 340 aaKnown RBP13.45□□□□□ -0.26
RTN4-202ENST00000337526 VRTNQ9H8Y1 702 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 RPL36Q9Y3U8 105 aaKnown RBP13.45□□□□□ -0.26
RTN4-202ENST00000337526 LOC100130705A0A1B0GUX0 176 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 MCIDASD6RGH6 385 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 STX16O14662 325 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 OPN1SWP03999 348 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 PSMD8P48556 350 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 DIO3P55073 304 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 SERINC3Q13530 473 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 TOMM20Q15388 145 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 C15orf39Q6ZRI6 1047 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 CHST15Q7LFX5 561 aaPredicted RBP13.45□□□□□ -0.26
RTN4-202ENST00000337526 CADM2Q8N3J6 435 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 ZNF563Q8TA94 476 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 HSPBAP1Q96EW2 488 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 FBXL20Q96IG2 436 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 HERPUD2Q9BSE4 406 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 IL1RAPQ9NPH3 570 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 COMMD3Q9UBI1 195 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 MTX2O75431 263 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 PAPSS2O95340 614 aaPredicted RBP13.45□□□□□ -0.26
RTN4-202ENST00000337526 NFATC1O95644 943 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 ZNF678Q5SXM1 525 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 PSRC1Q6PGN9 363 aaPredicted RBP13.45□□□□□ -0.26
RTN4-202ENST00000337526 SCAIQ8N9R8 606 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 SMG7Q92540 1137 aaKnown RBP13.45□□□□□ -0.26
RTN4-202ENST00000337526 EFCAB11Q9BUY7 163 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 NEK6Q9HC98 313 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 TMLHEQ9NVH6 421 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 PRRC2BQ5JSZ5 2229 aaKnown RBP13.45□□□□□ -0.26
RTN4-202ENST00000337526 TGFB1P01137 390 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 IL7RP16871 459 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 DNAJB13P59910 316 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 CREB5Q02930 508 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 MVKQ03426 396 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 ABHD18Q0P651 414 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 PTPRCAPQ14761 206 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 COLEC12Q5KU26 742 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms