RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 CAPN13Q6MZZ7 669 aaPredicted RBP21.88■■□□□ 1.09
IRF3-201ENST00000309877 KLHDC8AQ8IYD2 350 aa21.88■■□□□ 1.09
IRF3-201ENST00000309877 CHCHD4Q8N4Q1 142 aa21.88■■□□□ 1.09
IRF3-201ENST00000309877 PRR11Q96HE9 360 aaPredicted RBP21.88■■□□□ 1.09
IRF3-201ENST00000309877 TRNAU1APQ9NX07 287 aaKnown RBP21.88■■□□□ 1.09
IRF3-201ENST00000309877 ARMCX1Q9P291 453 aa21.88■■□□□ 1.09
IRF3-201ENST00000309877 TRPS1Q9UHF7 1281 aa21.88■■□□□ 1.09
IRF3-201ENST00000309877 PNMA8BQ9ULN7 279 aaPredicted RBP21.88■■□□□ 1.09
IRF3-201ENST00000309877 ST14Q9Y5Y6 855 aa21.88■■□□□ 1.09
IRF3-201ENST00000309877 ZFC3H1O60293 1989 aaKnown RBP21.88■■□□□ 1.09
IRF3-201ENST00000309877 LINC00032P0C843 101 aa21.88■■□□□ 1.09
IRF3-201ENST00000309877 EPORP19235 508 aa21.88■■□□□ 1.09
IRF3-201ENST00000309877 AK4P27144 223 aaPredicted RBP21.88■■□□□ 1.09
IRF3-201ENST00000309877 ACTR1BP42025 376 aa21.88■■□□□ 1.09
IRF3-201ENST00000309877 PNLIPRP1P54315 467 aa21.88■■□□□ 1.09
IRF3-201ENST00000309877 ACTR1AP61163 376 aa21.88■■□□□ 1.09
IRF3-201ENST00000309877 TSTA3Q13630 321 aaPredicted RBP21.88■■□□□ 1.09
IRF3-201ENST00000309877 CLCA4Q14CN2 919 aa21.88■■□□□ 1.09
IRF3-201ENST00000309877 DUS1LQ6P1R4 473 aaKnown RBP21.88■■□□□ 1.09
IRF3-201ENST00000309877 DCP2Q8IU60 420 aaKnown RBP21.88■■□□□ 1.09
IRF3-201ENST00000309877 HOMEZQ8IX15 550 aa21.88■■□□□ 1.09
IRF3-201ENST00000309877 HSPA12BQ96MM6 686 aa21.88■■□□□ 1.09
IRF3-201ENST00000309877 MIR1-1HGQ9H1L0 117 aa21.88■■□□□ 1.09
IRF3-201ENST00000309877 PLAGL1Q9UM63 463 aa21.88■■□□□ 1.09
IRF3-201ENST00000309877 RNF11Q9Y3C5 154 aa21.88■■□□□ 1.09
IRF3-201ENST00000309877 AOC1P19801 751 aa21.87■■□□□ 1.09
IRF3-201ENST00000309877 HSD17B2P37059 387 aa21.87■■□□□ 1.09
IRF3-201ENST00000309877 DMWDQ09019 674 aa21.87■■□□□ 1.09
IRF3-201ENST00000309877 ILF3Q12906 894 aaKnown RBP eCLIP21.87■■□□□ 1.09
IRF3-201ENST00000309877 LACTB2Q53H82 288 aaPredicted RBP21.87■■□□□ 1.09
IRF3-201ENST00000309877 RAB42Q8N4Z0 105 aa21.87■■□□□ 1.09
IRF3-201ENST00000309877 MFSD2AQ8NA29 543 aa21.87■■□□□ 1.09
IRF3-201ENST00000309877 CCT7Q99832 543 aa21.87■■□□□ 1.09
IRF3-201ENST00000309877 TUBB1Q9H4B7 451 aa21.87■■□□□ 1.09
IRF3-201ENST00000309877 SAR1AQ9NR31 198 aa21.87■■□□□ 1.09
IRF3-201ENST00000309877 GPR27Q9NS67 375 aa21.87■■□□□ 1.09
IRF3-201ENST00000309877 TBC1D29Q9UFV1 150 aa21.87■■□□□ 1.09
IRF3-201ENST00000309877 POLG2Q9UHN1 485 aa21.87■■□□□ 1.09
IRF3-201ENST00000309877 HEBP2Q9Y5Z4 205 aa21.87■■□□□ 1.09
IRF3-201ENST00000309877 SLCO1B1Q9Y6L6 691 aa21.87■■□□□ 1.09
IRF3-201ENST00000309877 ZNF839A8K0R7 811 aa21.86■■□□□ 1.09
IRF3-201ENST00000309877 BCKDHBP21953 392 aa21.86■■□□□ 1.09
IRF3-201ENST00000309877 MAOBP27338 520 aa21.86■■□□□ 1.09
IRF3-201ENST00000309877 CD38P28907 300 aa21.86■■□□□ 1.09
IRF3-201ENST00000309877 TBPL1P62380 186 aa21.86■■□□□ 1.09
IRF3-201ENST00000309877 BNIP1Q12981 228 aa21.86■■□□□ 1.09
IRF3-201ENST00000309877 EIF2B5Q13144 721 aaKnown RBP21.86■■□□□ 1.09
IRF3-201ENST00000309877 UBAP2LQ14157 1087 aaKnown RBP21.86■■□□□ 1.09
IRF3-201ENST00000309877 FZD2Q14332 565 aa21.86■■□□□ 1.09
IRF3-201ENST00000309877 GRB7Q14451 532 aa21.86■■□□□ 1.09
IRF3-201ENST00000309877 SLC30A9Q6PML9 568 aa21.86■■□□□ 1.09
IRF3-201ENST00000309877 CCL4L1Q8NHW4 92 aa21.86■■□□□ 1.09
IRF3-201ENST00000309877 MAGEB10Q96LZ2 347 aaPredicted RBP21.86■■□□□ 1.09
IRF3-201ENST00000309877 C3orf30Q96M34 536 aa21.86■■□□□ 1.09
IRF3-201ENST00000309877 IL17FQ96PD4 163 aa21.86■■□□□ 1.09
IRF3-201ENST00000309877 MVB12BQ9H7P6 319 aa21.86■■□□□ 1.09
IRF3-201ENST00000309877 G3BP2Q9UN86 482 aaKnown RBP21.86■■□□□ 1.09
IRF3-201ENST00000309877 PTGDR2Q9Y5Y4 395 aa21.86■■□□□ 1.09
IRF3-201ENST00000309877 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 ATP6AP2A0A1C7CYW4 349 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 OR52A4PA6NMU1 304 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 E7ENX8 843 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 CLGNO14967 610 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 DCXO43602 365 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 VPS4BO75351 444 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 ATP6AP2O75787 350 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 HOXA6P31267 233 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 RACK1P63244 317 aaKnown RBP21.85■■□□□ 1.09
IRF3-201ENST00000309877 IRF8Q02556 426 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 TAP2Q03519 686 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 ARHGAP19Q14CB8 494 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 RPE65Q16518 533 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 TCHHL1Q5QJ38 904 aaPredicted RBP21.85■■□□□ 1.09
IRF3-201ENST00000309877 FAM91A1Q658Y4 838 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 TSSK4Q6SA08 328 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 IL27RAQ6UWB1 636 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 ABRAXAS1Q6UWZ7 409 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 WASH2PQ6VEQ5 465 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 TMEFF1Q8IYR6 380 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 TUBGCP3Q96CW5 907 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 TUBB6Q9BUF5 446 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 SLC29A3Q9BZD2 475 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 WASH6PQ9NQA3 447 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 CCDC177Q9NQR7 707 aaPredicted RBP21.85■■□□□ 1.09
IRF3-201ENST00000309877 SPATA7Q9P0W8 599 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 KCNE2Q9Y6J6 123 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 FFAR3O14843 346 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 GPR42O15529 346 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 BLKP51451 505 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 CHIT1Q13231 466 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 FASTKQ14296 549 aaKnown RBP21.85■■□□□ 1.09
IRF3-201ENST00000309877 KRT72Q14CN4 511 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 TBCCQ15814 346 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 ZNF542PQ5EBM4 170 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 SCIMPQ6UWF3 145 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 IQCHQ86VS3 1027 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 PARGQ86W56 976 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 CAMK1GQ96NX5 476 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 OR4K3Q96R72 315 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 MIPEPQ99797 713 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms