RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 BTG3Q14201 252 aaPredicted RBP11.09□□□□□ -0.63
PHTF2-203ENST00000307305 MOGQ16653 247 aa11.09□□□□□ -0.63
PHTF2-203ENST00000307305 CASP12Q6UXS9 341 aa11.09□□□□□ -0.63
PHTF2-203ENST00000307305 MDGA1Q8NFP4 955 aa11.09□□□□□ -0.63
PHTF2-203ENST00000307305 SOCS4Q8WXH5 440 aa11.09□□□□□ -0.63
PHTF2-203ENST00000307305 SCAMP4Q969E2 229 aa11.09□□□□□ -0.63
PHTF2-203ENST00000307305 MAL2Q969L2 176 aa11.09□□□□□ -0.63
PHTF2-203ENST00000307305 INPP5KQ9BT40 448 aa11.09□□□□□ -0.63
PHTF2-203ENST00000307305 WRAP53Q9BUR4 548 aaKnown RBP11.09□□□□□ -0.63
PHTF2-203ENST00000307305 TLR9Q9NR96 1032 aa11.09□□□□□ -0.63
PHTF2-203ENST00000307305 ZIM2Q9NZV7 527 aa11.09□□□□□ -0.63
PHTF2-203ENST00000307305 SCML2Q9UQR0 700 aa11.09□□□□□ -0.63
PHTF2-203ENST00000307305 CAB39Q9Y376 341 aaPredicted RBP11.09□□□□□ -0.63
PHTF2-203ENST00000307305 ERAL1O75616 437 aaKnown RBP11.08□□□□□ -0.64
PHTF2-203ENST00000307305 SNX4O95219 450 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 ZNF12P17014 697 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 STK19P49842 368 aaPredicted RBP11.08□□□□□ -0.64
PHTF2-203ENST00000307305 ARMCX4Q5H9R4 360 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 LCN8Q6JVE9 175 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 TMCO2Q7Z6W1 182 aaPredicted RBP11.08□□□□□ -0.64
PHTF2-203ENST00000307305 OR5K1Q8NHB7 308 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 COL26A1Q96A83 441 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 TEKT2Q9UIF3 430 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 SLC25A13Q9UJS0 675 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 GABRQQ9UN88 632 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 MAGEB17A8MXT2 336 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 TGFB1P01137 390 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 PENKP01210 267 aaPredicted RBP11.08□□□□□ -0.64
PHTF2-203ENST00000307305 MAPKAPK2P49137 400 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 COPZ1P61923 177 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 SKIV2LQ15477 1246 aaKnown RBP11.08□□□□□ -0.64
PHTF2-203ENST00000307305 TNFAIP8L2Q6P589 184 aaPredicted RBP11.08□□□□□ -0.64
PHTF2-203ENST00000307305 TMEM126BQ8IUX1 230 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 ABHD11Q8NFV4 315 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 OR2T11Q8NH01 316 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 PROKR1Q8TCW9 393 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 KAT2AQ92830 837 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 RPL3LQ92901 407 aaKnown RBP11.08□□□□□ -0.64
PHTF2-203ENST00000307305 OTUB1Q96FW1 271 aaPredicted RBP11.08□□□□□ -0.64
PHTF2-203ENST00000307305 CRISPLD1Q9H336 500 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 NEDD8-MDP1E9PL57 170 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 LSM1O15116 133 aaKnown RBP11.08□□□□□ -0.64
PHTF2-203ENST00000307305 TMCC2O75069 709 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 SOX14O95416 240 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 CATP04040 527 aaKnown RBP11.08□□□□□ -0.64
PHTF2-203ENST00000307305 LCKP06239 509 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 HSD17B1P14061 328 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 HLCSP50747 726 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 YBX1P67809 324 aaKnown RBP11.08□□□□□ -0.64
PHTF2-203ENST00000307305 ADAM17P78536 824 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 ELAVL2Q12926 359 aaKnown RBP11.08□□□□□ -0.64
PHTF2-203ENST00000307305 PDZK1Q5T2W1 519 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 Q6ZPB1 254 aaPredicted RBP11.08□□□□□ -0.64
PHTF2-203ENST00000307305 AADATQ8N5Z0 425 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 NETO1Q8TDF5 533 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 TP53INP1Q96A56 240 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 UBXN10Q96LJ8 280 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 DEPDC7Q96QD5 511 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 ATOH8Q96SQ7 321 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 WDR12Q9GZL7 423 aaKnown RBP11.08□□□□□ -0.64
PHTF2-203ENST00000307305 GPR45Q9Y5Y3 372 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 LYVE1Q9Y5Y7 322 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 MTMR11A4FU01 709 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 ARHGEF9O43307 516 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 PAPSS2O95340 614 aaPredicted RBP11.08□□□□□ -0.64
PHTF2-203ENST00000307305 BCKDHAP12694 445 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 CCND3P30281 292 aaPredicted RBP11.08□□□□□ -0.64
PHTF2-203ENST00000307305 RPS7P62081 194 aaKnown RBP11.08□□□□□ -0.64
PHTF2-203ENST00000307305 C2orf80Q0P641 193 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 OR2T5Q6IEZ7 315 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 OR2T29Q8NH02 315 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 ARRDC2Q8TBH0 407 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 UBE2FQ969M7 185 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 PHF21AQ96BD5 680 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 CNPPD1Q9BV87 410 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 KAT8Q9H7Z6 458 aaKnown RBP11.08□□□□□ -0.64
PHTF2-203ENST00000307305 DNAJC11Q9NVH1 559 aa11.08□□□□□ -0.64
PHTF2-203ENST00000307305 FUOMA2VDF0 154 aa11.07□□□□□ -0.64
PHTF2-203ENST00000307305 BCAS1O75363 584 aaPredicted RBP11.07□□□□□ -0.64
PHTF2-203ENST00000307305 CRHR2Q13324 411 aa11.07□□□□□ -0.64
PHTF2-203ENST00000307305 PON2Q15165 354 aa11.07□□□□□ -0.64
PHTF2-203ENST00000307305 PCBP2Q15366 365 aaKnown RBP eCLIP11.07□□□□□ -0.641e-11■■■■□ 26.6
PHTF2-203ENST00000307305 TSPAN33Q86UF1 283 aa11.07□□□□□ -0.64
PHTF2-203ENST00000307305 ZBTB8BQ8NAP8 495 aaPredicted RBP11.07□□□□□ -0.64
PHTF2-203ENST00000307305 PKP4Q99569 1192 aa11.07□□□□□ -0.64
PHTF2-203ENST00000307305 CLEC4AQ9UMR7 237 aa11.07□□□□□ -0.64
PHTF2-203ENST00000307305 MRPS7Q9Y2R9 242 aaKnown RBP11.07□□□□□ -0.64
PHTF2-203ENST00000307305 OAS3Q9Y6K5 1087 aaKnown RBP11.07□□□□□ -0.64
PHTF2-203ENST00000307305 C2orf78A6NCI8 922 aa11.07□□□□□ -0.64
PHTF2-203ENST00000307305 OR6C75A6NL08 312 aa11.07□□□□□ -0.64
PHTF2-203ENST00000307305 FSHRP23945 695 aa11.07□□□□□ -0.64
PHTF2-203ENST00000307305 SPAM1P38567 509 aa11.07□□□□□ -0.64
PHTF2-203ENST00000307305 PTPN5P54829 565 aa11.07□□□□□ -0.64
PHTF2-203ENST00000307305 SNRPD1P62314 119 aaKnown RBP11.07□□□□□ -0.64
PHTF2-203ENST00000307305 EMX2Q04743 252 aa11.07□□□□□ -0.64
PHTF2-203ENST00000307305 RNASE12Q5GAN4 147 aaKnown RBP11.07□□□□□ -0.64
PHTF2-203ENST00000307305 KANK2Q63ZY3 851 aa11.07□□□□□ -0.64
PHTF2-203ENST00000307305 EIF3MQ7L2H7 374 aaKnown RBP11.07□□□□□ -0.64
PHTF2-203ENST00000307305 AKAP14Q86UN6 197 aa11.07□□□□□ -0.64
PHTF2-203ENST00000307305 EPHX4Q8IUS5 362 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms