RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 IGLON5A6NGN9 336 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 SLC28A1O00337 649 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 IFRD1O00458 451 aaPredicted RBP11.08□□□□□ -0.64
SCG2-201ENST00000305409 CASQ2O14958 399 aaPredicted RBP11.08□□□□□ -0.64
SCG2-201ENST00000305409 SCAMP1O15126 338 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 ARPC2O15144 300 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 MID1O15344 667 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 AKAP10O43572 662 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 KRT6AP02538 564 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 C1QCP02747 245 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 KRT6BP04259 564 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 PCCBP05166 539 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 GSNP06396 782 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 ZNF8P17098 575 aaPredicted RBP11.08□□□□□ -0.64
SCG2-201ENST00000305409 CKMT2P17540 419 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 EFNA1P20827 205 aaPredicted RBP11.08□□□□□ -0.64
SCG2-201ENST00000305409 NFKBIAP25963 317 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 KRT6CP48668 564 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 PRLHRP49683 370 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 OR4D2P58180 307 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 IRF8Q02556 426 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 HMBOX1Q6NT76 420 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 AGTRAPQ6RW13 159 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 DLEU7Q6UYE1 221 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.08□□□□□ -0.64
SCG2-201ENST00000305409 CYP2U1Q7Z449 544 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 TRMT11Q7Z4G4 463 aaKnown RBP11.08□□□□□ -0.64
SCG2-201ENST00000305409 THOC6Q86W42 341 aaKnown RBP11.08□□□□□ -0.64
SCG2-201ENST00000305409 ZNF547Q8IVP9 402 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 USP7Q93009 1102 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 AURKBQ96GD4 344 aaPredicted RBP11.08□□□□□ -0.64
SCG2-201ENST00000305409 OR4K3Q96R72 315 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 CCT7Q99832 543 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 LGR4Q9BXB1 951 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 SLC28A3Q9HAS3 691 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 VAPAQ9P0L0 249 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 STOX2Q9P2F5 926 aaPredicted RBP11.08□□□□□ -0.64
SCG2-201ENST00000305409 DOCK8Q8NF50 2099 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 KCNE1BA0A087WTH5 132 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 TCRBV3S1A0A5B6 114 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 SLC5A10A0PJK1 596 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 DPPA5A6NC42 116 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 H3BM21 787 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 AP2A2O94973 939 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 PCDH8O95206 1070 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 C8BP07358 591 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 PHC1P78364 1004 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 CDKL1Q00532 357 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 FOLH1Q04609 750 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 HYAL1Q12794 435 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 STARD3Q14849 445 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 PDGFRLQ15198 375 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 C6orf52Q5T4I8 152 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 ERN2Q76MJ5 926 aaKnown RBP11.07□□□□□ -0.64
SCG2-201ENST00000305409 LRRC70Q7Z2Q7 622 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 TRIM46Q7Z4K8 759 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 PHC3Q8NDX5 983 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 OR2T34Q8NGX1 318 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 OR2T3Q8NH03 318 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 TIFAQ96CG3 184 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 IL17FQ96PD4 163 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 CIB1Q99828 191 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 TBCDQ9BTW9 1192 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 IKZF5Q9H5V7 419 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 COQ10BQ9H8M1 238 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 C1orf109Q9NX04 203 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 KLHL42Q9P2K6 505 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 CDH7Q9ULB5 785 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 SH2B3Q9UQQ2 575 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 KNL1Q8NG31 2342 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 ZFC3H1O60293 1989 aaKnown RBP11.07□□□□□ -0.64
SCG2-201ENST00000305409 KANSL1LA0AUZ9 987 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 ENO2P09104 434 aaPredicted RBP11.07□□□□□ -0.64
SCG2-201ENST00000305409 GSTM1P09488 218 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 IMPA1P29218 277 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 TIE1P35590 1138 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 MEF2AQ02078 507 aaPredicted RBP11.07□□□□□ -0.64
SCG2-201ENST00000305409 GSTM4Q03013 218 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 TRAP1Q12931 704 aaKnown RBP11.07□□□□□ -0.64
SCG2-201ENST00000305409 KIAA0040Q15053 153 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 TCEA2Q15560 299 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 PGS1Q32NB8 556 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 IRGCQ6NXR0 463 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 FAM83HQ6ZRV2 1179 aaPredicted RBP11.07□□□□□ -0.64
SCG2-201ENST00000305409 PHACTR4Q8IZ21 702 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 TMIEQ8NEW7 156 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 EME1Q96AY2 570 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 VPS35Q96QK1 796 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 SEPHS2Q99611 448 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 SLC29A1Q99808 456 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 MRPL40Q9NQ50 206 aaKnown RBP11.07□□□□□ -0.64
SCG2-201ENST00000305409 GDE1Q9NZC3 331 aa11.07□□□□□ -0.64
SCG2-201ENST00000305409 MYOCOSA0A1B0GUC4 107 aa11.06□□□□□ -0.64
SCG2-201ENST00000305409 ARHGAP10A1A4S6 786 aa11.06□□□□□ -0.64
SCG2-201ENST00000305409 SAC3D1A6NKF1 404 aa11.06□□□□□ -0.64
SCG2-201ENST00000305409 NPC1O15118 1278 aa11.06□□□□□ -0.64
SCG2-201ENST00000305409 KPNA5O15131 536 aa11.06□□□□□ -0.64
SCG2-201ENST00000305409 LATO43561 262 aa11.06□□□□□ -0.64
SCG2-201ENST00000305409 PSIP1O75475 530 aaKnown RBP11.06□□□□□ -0.64
SCG2-201ENST00000305409 POP7O75817 140 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms