RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 ENO4A6NNW6 628 aa6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 FAM227AF5H4B4 570 aa6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 HAS3O00219 553 aa6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 COCHO43405 550 aa6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 PAPSS2O95340 614 aaPredicted RBP6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 FHP07954 510 aa6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 EFNA1P20827 205 aaPredicted RBP6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 HNRNPH3P31942 346 aaKnown RBP6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 NRLP54845 237 aa6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 MLLT1Q03111 559 aaPredicted RBP6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 RUNX3Q13761 415 aa6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 NAIF1Q69YI7 327 aaPredicted RBP6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 CXorf57Q6NSI4 855 aaKnown RBP6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 ZNF662Q6ZS27 426 aa6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 TXNDC5Q8NBS9 432 aaKnown RBP6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 KBTBD8Q8NFY9 601 aa6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 GRHL3Q8TE85 626 aa6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 SPOCK2Q92563 424 aa6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 NKD2Q969F2 451 aaPredicted RBP6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 DHRS1Q96LJ7 313 aa6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 TRAPPC9Q96Q05 1148 aa6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 YIPF4Q9BSR8 244 aa6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 DCUN1D5Q9BTE7 237 aa6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 DUSP26Q9BV47 211 aa6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 IFT27Q9BW83 186 aa6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 WDR55Q9H6Y2 383 aaPredicted RBP6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 Q9N2J8 555 aa6.78□□□□□ -1.32
GAPVD1-202ENST00000297933 KAT7O95251 611 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 BMP6P22004 513 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 ACVR2AP27037 513 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 SHMT2P34897 504 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 CDK9P50750 372 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 RPS14P62263 151 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 FOXK1P85037 733 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 MC1RQ01726 317 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 GPR68Q15743 365 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 UPP1Q16831 310 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 ZNF805Q5CZA5 627 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 SMARCD3Q6STE5 483 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 GALNT5Q7Z7M9 940 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 METTL27Q8N6F8 245 aaPredicted RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 EPYCQ99645 322 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 TPSD1Q9BZJ3 242 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 ADAMTS10Q9H324 1103 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 TFB2MQ9H5Q4 396 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 PIGVQ9NUD9 493 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 PRPF19Q9UMS4 504 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 NFAT5O94916 1531 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 CPSF4LA6NMK7 179 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 NPIPA5E9PKD4 350 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 KPNA4O00629 521 aaPredicted RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 TSPAN6O43657 245 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 ASNA1O43681 348 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 TRIM3O75382 744 aaPredicted RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 NME6O75414 186 aaPredicted RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 CCNB2O95067 398 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 FBLP22087 321 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 PTX3P26022 381 aaPredicted RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 SLC6A9P48067 706 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 FAM214AQ32MH5 1076 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 FSTL4Q6MZW2 842 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 SLC36A4Q6YBV0 504 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 LRRC70Q7Z2Q7 622 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 IQCF2Q8IXL9 164 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 OR52J3Q8NH60 311 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 ESAMQ96AP7 390 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 TGM7Q96PF1 710 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 GPATCH1Q9BRR8 931 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 BHLHE41Q9C0J9 482 aaPredicted RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 WDR6Q9NNW5 1121 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 THUMPD1Q9NXG2 353 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 MAFFQ9ULX9 164 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 NPIPA1Q9UND3 350 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 A0A1W2PQ72 361 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 SSNA1O43805 119 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 DBIP07108 87 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 NR2C1P13056 603 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 HSD11B1P28845 292 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 FAUP35544 74 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 CACNA2D1P54289 1103 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 VLDLRP98155 873 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 UBAP2Q5T6F2 1119 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 TNFAIP8L2Q6P589 184 aaPredicted RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 THOC6Q86W42 341 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 TBC1D21Q8IYX1 336 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 NATD1Q8N6N6 113 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 ANKLE1Q8NAG6 615 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 HM13Q8TCT9 377 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 ZNF516Q92618 1163 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 COQ8BQ96D53 544 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 PSKH2Q96QS6 385 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 TRIM2Q9C040 744 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 CCNB1IP1Q9NPC3 277 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 UTS2RQ9UKP6 389 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 RAB21Q9UL25 225 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 OAS3Q9Y6K5 1087 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 OR51F1A6NGY5 319 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 OR5K4A6NMS3 321 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 AGPSO00116 658 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 CASKO14936 926 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms