RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 TMED9Q9BVK6 235 aa12.21□□□□□ -0.46
SLX4-201ENST00000294008 CORO1CQ9ULV4 474 aaPredicted RBP12.21□□□□□ -0.46
SLX4-201ENST00000294008 REXO2Q9Y3B8 237 aaKnown RBP12.21□□□□□ -0.46
SLX4-201ENST00000294008 A0A0A0MRY4 1105 aa12.21□□□□□ -0.46
SLX4-201ENST00000294008 DDTLA6NHG4 134 aaPredicted RBP12.21□□□□□ -0.46
SLX4-201ENST00000294008 MMP3P08254 477 aa12.21□□□□□ -0.46
SLX4-201ENST00000294008 LUMP51884 338 aaPredicted RBP12.21□□□□□ -0.46
SLX4-201ENST00000294008 LAPTM4BQ86VI4 370 aa12.21□□□□□ -0.46
SLX4-201ENST00000294008 C4orf19Q8IY42 314 aa12.21□□□□□ -0.46
SLX4-201ENST00000294008 ATAD1Q8NBU5 361 aa12.21□□□□□ -0.46
SLX4-201ENST00000294008 STOML3Q8TAV4 291 aa12.21□□□□□ -0.46
SLX4-201ENST00000294008 SPRYD4Q8WW59 207 aaPredicted RBP12.21□□□□□ -0.46
SLX4-201ENST00000294008 FCRL2Q96LA5 508 aaPredicted RBP12.21□□□□□ -0.46
SLX4-201ENST00000294008 SPATA13Q96N96 652 aa12.21□□□□□ -0.46
SLX4-201ENST00000294008 CYP2S1Q96SQ9 504 aa12.21□□□□□ -0.46
SLX4-201ENST00000294008 TAS2R1Q9NYW7 299 aa12.21□□□□□ -0.46
SLX4-201ENST00000294008 CA14Q9ULX7 337 aa12.21□□□□□ -0.46
SLX4-201ENST00000294008 ASTN2O75129 1339 aaPredicted RBP12.21□□□□□ -0.46
SLX4-201ENST00000294008 FRMPD4Q14CM0 1322 aa12.21□□□□□ -0.46
SLX4-201ENST00000294008 JCADQ9P266 1359 aa12.21□□□□□ -0.46
SLX4-201ENST00000294008 BICRAQ9NZM4 1560 aa12.21□□□□□ -0.46
SLX4-201ENST00000294008 RTCAO00442 366 aaKnown RBP12.21□□□□□ -0.46
SLX4-201ENST00000294008 CXCL11O14625 94 aa12.21□□□□□ -0.46
SLX4-201ENST00000294008 EIPR1Q53HC9 387 aa12.21□□□□□ -0.46
SLX4-201ENST00000294008 RBM44Q6ZP01 1051 aaKnown RBP12.21□□□□□ -0.46
SLX4-201ENST00000294008 SDSLQ96GA7 329 aa12.21□□□□□ -0.46
SLX4-201ENST00000294008 HIPK2Q9H2X6 1198 aa12.21□□□□□ -0.46
SLX4-201ENST00000294008 ASB7Q9H672 318 aa12.21□□□□□ -0.46
SLX4-201ENST00000294008 A0A1B0GVI7 797 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 NEMP2A6NFY4 417 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 MEIS2O14770 477 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 LILRB5O75023 590 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 CLDN9O95484 217 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 KDELR1P24390 212 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 CRHR2Q13324 411 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 USP50Q70EL3 339 aaPredicted RBP12.2□□□□□ -0.46
SLX4-201ENST00000294008 THAP6Q8TBB0 222 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 WDR12Q9GZL7 423 aaKnown RBP12.2□□□□□ -0.46
SLX4-201ENST00000294008 SMURF2Q9HAU4 748 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 A0A0A6YYH2 397 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 A0A0J9YYE9 177 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 A6NJ64 397 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 SLC2A1P11166 492 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 RPL10P27635 214 aaKnown RBP12.2□□□□□ -0.46
SLX4-201ENST00000294008 RHBDL3P58872 404 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 PITPNAQ00169 270 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 MPP7Q5T2T1 576 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 STEAP3Q658P3 488 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 PIGZQ86VD9 579 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 SNX29P2Q8IUI4 249 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 SIDT2Q8NBJ9 832 aaKnown RBP12.2□□□□□ -0.46
SLX4-201ENST00000294008 LIPHQ8WWY8 451 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 SGCZQ96LD1 299 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 KAT8Q9H7Z6 458 aaKnown RBP12.2□□□□□ -0.46
SLX4-201ENST00000294008 EURLQ9NYK6 297 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 UGGT1Q9NYU2 1555 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 LYPLA1O75608 230 aaPredicted RBP12.2□□□□□ -0.46
SLX4-201ENST00000294008 PRAMEF1O95521 474 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 ATP4AP20648 1035 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 FMO3P31513 532 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 KIR3DL1P43629 444 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 RGS6P49758 472 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 KCTD19Q17RG1 926 aaPredicted RBP12.2□□□□□ -0.46
SLX4-201ENST00000294008 RAET1LQ5VY80 246 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 KYAT3Q6YP21 454 aaKnown RBP12.2□□□□□ -0.46
SLX4-201ENST00000294008 BAP1Q92560 729 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 PDCD1LG2Q9BQ51 273 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 NUFIP1Q9UHK0 495 aaKnown RBP12.2□□□□□ -0.46
SLX4-201ENST00000294008 E7ENX8 843 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 J3QLW9 94 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 AGPSO00116 658 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 CCL22O00626 93 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 APOL3O95236 402 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 FARS2O95363 451 aaKnown RBP12.2□□□□□ -0.46
SLX4-201ENST00000294008 IDO1P14902 403 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 ZNF19P17023 458 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 RRP1BQ14684 758 aaKnown RBP12.2□□□□□ -0.46
SLX4-201ENST00000294008 DNM1P34Q6PK57 102 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 GALNT10Q86SR1 603 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 OR7G1Q8NGA0 311 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 PELOQ9BRX2 385 aaKnown RBP12.2□□□□□ -0.46
SLX4-201ENST00000294008 SNRNP25Q9BV90 132 aaKnown RBP12.2□□□□□ -0.46
SLX4-201ENST00000294008 GOLGA2P5Q9HBQ8 144 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 IL1RAPQ9NPH3 570 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 C19orf25Q9UFG5 118 aaPredicted RBP12.2□□□□□ -0.46
SLX4-201ENST00000294008 ILVBLA1L0T0 632 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 EFCAB9A8MZ26 197 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 ETS2P15036 469 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 RBM34P42696 430 aaKnown RBP12.2□□□□□ -0.46
SLX4-201ENST00000294008 ID2Q02363 134 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 ERN2Q76MJ5 926 aaKnown RBP12.2□□□□□ -0.46
SLX4-201ENST00000294008 SPPL2BQ8TCT7 592 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 MAP3K3Q99759 626 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 FARSBQ9NSD9 589 aaKnown RBP12.2□□□□□ -0.46
SLX4-201ENST00000294008 SERTAD3Q9UJW9 196 aa12.2□□□□□ -0.46
SLX4-201ENST00000294008 CH25HO95992 272 aa12.19□□□□□ -0.46
SLX4-201ENST00000294008 MAPTP10636 758 aaKnown RBP12.19□□□□□ -0.46
SLX4-201ENST00000294008 HOXB9P17482 250 aaPredicted RBP12.19□□□□□ -0.46
SLX4-201ENST00000294008 S100PP25815 95 aa12.19□□□□□ -0.46
SLX4-201ENST00000294008 UBE2NP61088 152 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms