RNA–Protein interactions for RNA: ENST00000282074.6

SPC25-201, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC25, Length 1,354 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-201ENST00000282074 SEMA3GQ9NS98 782 aa11.53□□□□□ -0.56
SPC25-201ENST00000282074 SEC14L3Q9UDX4 400 aa11.53□□□□□ -0.56
SPC25-201ENST00000282074 HS3ST3B1Q9Y662 390 aa11.53□□□□□ -0.56
SPC25-201ENST00000282074 EPN1Q9Y6I3 576 aaPredicted RBP11.53□□□□□ -0.56
SPC25-201ENST00000282074 CFAP99D6REC4 459 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 GAPDHSO14556 408 aaPredicted RBP11.52□□□□□ -0.57
SPC25-201ENST00000282074 APOL1O14791 398 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 HCRTR1O43613 425 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 BUD23O43709 281 aaKnown RBP11.52□□□□□ -0.57
SPC25-201ENST00000282074 KLHL18O94889 574 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 IPO7O95373 1038 aaKnown RBP11.52□□□□□ -0.57
SPC25-201ENST00000282074 PRAMEF1O95521 474 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 NUDT7P0C024 238 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 MYBL2P10244 700 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 ESRRAP11474 423 aaPredicted RBP11.52□□□□□ -0.57
SPC25-201ENST00000282074 UGT2B7P16662 529 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 ZFXP17010 805 aaPredicted RBP11.52□□□□□ -0.57
SPC25-201ENST00000282074 KDELR1P24390 212 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 PRKG2Q13237 762 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 ZIC1Q15915 447 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 NKG7Q16617 165 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 FAM182AQ5T1J6 154 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 WDR93Q6P2C0 686 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 TTLL10Q6ZVT0 673 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 TRIM73Q86UV7 250 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 DNAJC22Q8N4W6 341 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 SLC25A41Q8N5S1 370 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 LILRA3Q8N6C8 439 aaPredicted RBP11.52□□□□□ -0.57
SPC25-201ENST00000282074 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.52□□□□□ -0.57
SPC25-201ENST00000282074 DNAJB8Q8NHS0 232 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 CCDC110Q8TBZ0 833 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 HEXDCQ8WVB3 486 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 MTFMTQ96DP5 389 aaKnown RBP11.52□□□□□ -0.57
SPC25-201ENST00000282074 TEKT5Q96M29 485 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 OR2A14Q96R47 310 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 TAAR6Q96RI8 345 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 SLC26A1Q9H2B4 701 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 ACBD3Q9H3P7 528 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 ASB8Q9H765 288 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 VPS37BQ9H9H4 285 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 SLC22A11Q9NSA0 550 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 ZNF446Q9NWS9 450 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 PSD3Q9NYI0 1048 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 ABI3Q9P2A4 366 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 LCMT1Q9UIC8 334 aa11.52□□□□□ -0.57
SPC25-201ENST00000282074 BZW2Q9Y6E2 419 aaKnown RBP11.52□□□□□ -0.57
SPC25-201ENST00000282074 A0A0J9YY10 115 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 A0A1B0GX78 115 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 SOWAHDA6NJG2 315 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 FANCGO15287 622 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 SRP72O76094 671 aaKnown RBP11.51□□□□□ -0.57
SPC25-201ENST00000282074 USP1O94782 785 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 PROSCO94903 275 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 ONECUT2O95948 504 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 HPP00738 406 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 SHMT2P34897 504 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 PRLHRP49683 370 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 TNFSF10P50591 281 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 KRTAP10-9P60411 292 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 CKAP4Q07065 602 aaKnown RBP11.51□□□□□ -0.57
SPC25-201ENST00000282074 RPA4Q13156 261 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 NOMO1Q15155 1222 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 SLC1A5Q15758 541 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 CEP97Q8IW35 865 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 TMEM151BQ8IW70 566 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 KBTBD2Q8IY47 623 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 OR11G2Q8NGC1 345 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 NAT14Q8WUY8 206 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 RAPGEF5Q92565 580 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 TFGQ92734 400 aaPredicted RBP11.51□□□□□ -0.57
SPC25-201ENST00000282074 HAS2Q92819 552 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 ULK4Q96C45 1275 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 NRTNQ99748 197 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 HGH1Q9BTY7 390 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 OR52A5Q9H2C5 316 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 VIPAS39Q9H9C1 493 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 MCCC2Q9HCC0 563 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 IL1RAPL1Q9NZN1 696 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 CRLS1Q9UJA2 301 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 SH3BGRL2Q9UJC5 107 aa11.51□□□□□ -0.57
SPC25-201ENST00000282074 MRPS2Q9Y399 296 aaKnown RBP11.51□□□□□ -0.57
SPC25-201ENST00000282074 ANKHD1Q8IWZ3 2542 aaKnown RBP11.5□□□□□ -0.57
SPC25-201ENST00000282074 NIPBLQ6KC79 2804 aaeCLIP11.5□□□□□ -0.57
SPC25-201ENST00000282074 LRRD1A4D1F6 860 aa11.5□□□□□ -0.57
SPC25-201ENST00000282074 C2orf81A6NN90 581 aa11.5□□□□□ -0.57
SPC25-201ENST00000282074 ZNF487B1APH4 448 aa11.5□□□□□ -0.57
SPC25-201ENST00000282074 MAP2K7O14733 419 aa11.5□□□□□ -0.57
SPC25-201ENST00000282074 SGTAO43765 313 aa11.5□□□□□ -0.57
SPC25-201ENST00000282074 RASAL1O95294 804 aa11.5□□□□□ -0.57
SPC25-201ENST00000282074 CLDN14O95500 239 aa11.5□□□□□ -0.57
SPC25-201ENST00000282074 CTSBP07858 339 aa11.5□□□□□ -0.57
SPC25-201ENST00000282074 ATP1B2P14415 290 aaPredicted RBP11.5□□□□□ -0.57
SPC25-201ENST00000282074 ARHGAP25P42331 645 aa11.5□□□□□ -0.57
SPC25-201ENST00000282074 CHRNA4P43681 627 aa11.5□□□□□ -0.57
SPC25-201ENST00000282074 CARSP49589 748 aaKnown RBP11.5□□□□□ -0.57
SPC25-201ENST00000282074 TAS2R40P59535 323 aa11.5□□□□□ -0.57
SPC25-201ENST00000282074 TMPRSS15P98073 1019 aa11.5□□□□□ -0.57
SPC25-201ENST00000282074 Q0VFX4 171 aa11.5□□□□□ -0.57
SPC25-201ENST00000282074 BOP1Q14137 746 aaKnown RBP11.5□□□□□ -0.57
SPC25-201ENST00000282074 SLC9A4Q6AI14 798 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms