RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 ZFP37Q9Y6Q3 630 aaPredicted RBP12.7□□□□□ -0.38
SNX1-201ENST00000261889 MYO10Q9HD67 2058 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 M0QZ92 97 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 INSIG1O15503 277 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 KCNK2O95069 426 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 SDHBP21912 280 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 KRT20P35900 424 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 GALNT1Q10472 559 aaPredicted RBP12.7□□□□□ -0.38
SNX1-201ENST00000261889 XKR4Q5GH76 650 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 TTC23Q5W5X9 447 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 DESI1Q6ICB0 168 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 SOCS4Q8WXH5 440 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 OR51E2Q9H255 320 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 TPK1Q9H3S4 243 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 DDX28Q9NUL7 540 aaKnown RBP12.7□□□□□ -0.38
SNX1-201ENST00000261889 DNAJB9Q9UBS3 223 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 NOX1Q9Y5S8 564 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 CCDC88CQ9P219 2028 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 MBLAC1A4D2B0 266 aaPredicted RBP12.69□□□□□ -0.38
SNX1-201ENST00000261889 C16orf96A6NNT2 1141 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 ZNF701M0R085 212 aaPredicted RBP12.69□□□□□ -0.38
SNX1-201ENST00000261889 TNFRSF10BO14763 440 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 ITPKAP23677 461 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 GADD45AP24522 165 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 CD40LGP29965 261 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 DBPQ10586 325 aaPredicted RBP12.69□□□□□ -0.38
SNX1-201ENST00000261889 GRSF1Q12849 480 aaKnown RBP eCLIP12.69□□□□□ -0.38
SNX1-201ENST00000261889 TAB1Q15750 504 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 PTRHD1Q6GMV3 140 aaKnown RBP12.69□□□□□ -0.38
SNX1-201ENST00000261889 PLEKHG7Q6ZR37 379 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 CLECL1Q8IZS7 167 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 ST13P5Q8NFI4 369 aaPredicted RBP12.69□□□□□ -0.38
SNX1-201ENST00000261889 WBP2Q969T9 261 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 EID2BQ96D98 161 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 LGALS12Q96DT0 336 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 APOLD1Q96LR9 279 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 CINPQ9BW66 212 aaPredicted RBP12.69□□□□□ -0.38
SNX1-201ENST00000261889 MROQ9BYG7 248 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 GPN2Q9H9Y4 310 aaPredicted RBP12.69□□□□□ -0.38
SNX1-201ENST00000261889 WDR37Q9Y2I8 494 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 PIKFYVEQ9Y2I7 2098 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 LOC285095A0A1B0GVY8 99 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 LCHNA4D1U4 455 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 TGM1P22735 817 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 POLD2P49005 469 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 NFKB2Q00653 900 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 SERINC3Q13530 473 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 RFLNAQ6ZTI6 216 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 UTP15Q8TED0 518 aaKnown RBP12.69□□□□□ -0.38
SNX1-201ENST00000261889 MYLIPQ8WY64 445 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 STARD8Q92502 1023 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 ASPSCR1Q9BZE9 553 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 ARHGAP39Q9C0H5 1083 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 TP63Q9H3D4 680 aaPredicted RBP12.69□□□□□ -0.38
SNX1-201ENST00000261889 MRM3Q9HC36 420 aaKnown RBP12.69□□□□□ -0.38
SNX1-201ENST00000261889 SYTL2Q9HCH5 934 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 MBD1Q9UIS9 605 aaPredicted RBP12.69□□□□□ -0.38
SNX1-201ENST00000261889 SAMHD1Q9Y3Z3 626 aaKnown RBP12.69□□□□□ -0.38
SNX1-201ENST00000261889 EFCAB9A8MZ26 197 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 TNPO2O14787 897 aaKnown RBP12.69□□□□□ -0.38
SNX1-201ENST00000261889 SNPHO15079 494 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 GJB5O95377 273 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 PWP1Q13610 501 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 BRMS1LQ5PSV4 323 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 FAM171BQ6P995 826 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 ZNF621Q6ZSS3 439 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 PROSER1Q86XN7 944 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 HDAC2Q92769 488 aaKnown RBP12.69□□□□□ -0.38
SNX1-201ENST00000261889 REXO5Q96IC2 774 aaKnown RBP12.69□□□□□ -0.38
SNX1-201ENST00000261889 DERL2Q9GZP9 239 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 ATG10Q9H0Y0 220 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 DCSTAMPQ9H295 470 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 ARNT2Q9HBZ2 717 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 TMEM184CQ9NVA4 438 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 GABRQQ9UN88 632 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 TESMINQ9Y4I5 508 aa12.69□□□□□ -0.38
SNX1-201ENST00000261889 FAM227AF5H4B4 570 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 H0YAE9 185 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 MYCP01106 439 aaPredicted RBP12.68□□□□□ -0.38
SNX1-201ENST00000261889 GNRH1P01148 92 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 PRLP01236 227 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.68□□□□□ -0.38
SNX1-201ENST00000261889 LRRC66Q68CR7 880 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 SPATA19Q7Z5L4 167 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 TMEM86AQ8N2M4 240 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 DNASE1L2Q92874 299 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 ACBD6Q9BR61 282 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 DSN1Q9H410 356 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 RAD18Q9NS91 495 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 WBP1LQ9NX94 342 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 GPR83Q9NYM4 423 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 RHCGQ9UBD6 479 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 ZNF639Q9UID6 485 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 ORC6Q9Y5N6 252 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 RAI2Q9Y5P3 530 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 FFAR2O15552 330 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 PCDHGA12O60330 932 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 PRR35P0CG20 571 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 ZNF865P0CJ78 1059 aaPredicted RBP12.68□□□□□ -0.38
SNX1-201ENST00000261889 DUSP4Q13115 394 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms