RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 IRAK3Q9Y616 596 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 COPG1Q9Y678 874 aaKnown RBP13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 SRP54P61011 504 aaKnown RBP13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 FAM78AQ5JUQ0 283 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 TBCELQ5QJ74 424 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 GALNT15Q8N3T1 639 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 ZNF75CPQ92670 426 aaPredicted RBP13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 TOE1Q96GM8 510 aaKnown RBP13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 APOOQ9BUR5 198 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 HOXD1Q9GZZ0 328 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 CYP17A1P05093 508 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 TALDO1P37837 337 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 DEFA1P59665 94 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 DEFA3P59666 94 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 DPY19L3Q6ZPD9 716 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 ZNF605Q86T29 641 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 AMIGO1Q86WK6 493 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 KIAA2013Q8IYS2 634 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 AGBL5Q8NDL9 886 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 PHF10Q8WUB8 498 aaKnown RBP13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 ZNF689Q96CS4 500 aaPredicted RBP13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 MKKSQ9NPJ1 570 aaPredicted RBP13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 MAT2BQ9NZL9 334 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 ARHGEF33A8MVX0 844 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 PRDX6P30041 224 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 TRAF2Q12933 501 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 ZNF234Q14588 700 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 SPATS1Q496A3 300 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 LRIF1Q5T3J3 769 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 DEPDC1Q5TB30 811 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 PYROXD2Q8N2H3 581 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 IMP4Q96G21 291 aaKnown RBP13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 PRTFDC1Q9NRG1 225 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 DNMT3BQ9UBC3 853 aaKnown RBP13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 DMGDHQ9UI17 866 aaKnown RBP13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 GJA4P35212 333 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 NEK2P51955 445 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 FIP1L1Q6UN15 594 aaKnown RBP13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 NRROSQ86YC3 692 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 IRF2BP1Q8IU81 584 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 TMEM40Q8WWA1 233 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 SPAG4Q9NPE6 437 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 POT1Q9NUX5 634 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 GALNT8Q9NY28 637 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 RAB21Q9UL25 225 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 PRPF19Q9UMS4 504 aaKnown RBP13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 LOC100653049A0A140TA62 436 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 C2P06681 752 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 NKX3-2P78367 333 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 ARHGAP8P85298 464 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 HHEXQ03014 270 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 QPCTQ16769 361 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 LHX8Q68G74 356 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 C11orf65Q8NCR3 313 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 MDGA1Q8NFP4 955 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 SLC13A3Q8WWT9 602 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 UCN3Q969E3 161 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 ZNF354BQ96LW1 612 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 FER1L6-AS2Q96M78 137 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 ZPBPQ9BS86 351 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 NAA11Q9BSU3 229 aaPredicted RBP13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 CLN6Q9NWW5 311 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 SEC14L3Q9UDX4 400 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 SCN4AP35499 1836 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 H3BN98 237 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 MID1O15344 667 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 CAPN5O15484 640 aaPredicted RBP13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 MPZL2O60487 215 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 OR2B3O76000 313 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 EBLN1P0CF75 366 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 CYP4F2P78329 520 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 SLBPQ14493 270 aaKnown RBP eCLIP13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 NFATC4Q14934 902 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 OR4C15Q8NGM1 316 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 OR2W6PQ8NHA6 318 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 CLEC4CQ8WTT0 213 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 SLC38A4Q969I6 547 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 JSRP1Q96MG2 331 aaPredicted RBP13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 FAM192AQ9GZU8 254 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 SMG9Q9H0W8 520 aaKnown RBP13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 ZNF726A6NNF4 738 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 CLDN7O95471 211 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 RPS3P23396 243 aaKnown RBP eCLIP13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 MTTPP55157 894 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 ARHGAP19Q14CB8 494 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 DCAF12Q5T6F0 453 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 ABHD17BQ5VST6 288 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 CLEC1AQ8NC01 280 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 MIEF2Q96C03 454 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 TWNKQ96RR1 684 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 KIFC1Q9BW19 673 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 CHRAC1Q9NRG0 131 aa13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.11□□□□□ -0.31
PRPF38A-201ENST00000257181 SMIM31A0A1B0GVY4 71 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 MYL12BO14950 172 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 NDUFS4O43181 175 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 ZSCAN5DPP0CG00 497 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 CD247P20963 164 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 ACRV1P26436 265 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 PER3P56645 1201 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms