RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 FAM187AA6NFU0 413 aa13.31□□□□□ -0.28
DDX39A-201ENST00000242776 OR2B3O76000 313 aa13.31□□□□□ -0.28
DDX39A-201ENST00000242776 IPO13O94829 963 aaKnown RBP13.31□□□□□ -0.28
DDX39A-201ENST00000242776 PRAMEF1O95521 474 aa13.31□□□□□ -0.28
DDX39A-201ENST00000242776 NDUFS1P28331 727 aa13.31□□□□□ -0.28
DDX39A-201ENST00000242776 TNNT3P45378 269 aaPredicted RBP13.31□□□□□ -0.28
DDX39A-201ENST00000242776 GDF10P55107 478 aa13.31□□□□□ -0.28
DDX39A-201ENST00000242776 WASHC5Q12768 1159 aa13.31□□□□□ -0.28
DDX39A-201ENST00000242776 ANKRD20A2Q5SQ80 823 aa13.31□□□□□ -0.28
DDX39A-201ENST00000242776 ANKRD20A1Q5TYW2 823 aa13.31□□□□□ -0.28
DDX39A-201ENST00000242776 ANKRD20A3Q5VUR7 823 aa13.31□□□□□ -0.28
DDX39A-201ENST00000242776 PID1Q7Z2X4 250 aa13.31□□□□□ -0.28
DDX39A-201ENST00000242776 PARP9Q8IXQ6 854 aa13.31□□□□□ -0.28
DDX39A-201ENST00000242776 ZNF567Q8N184 647 aa13.31□□□□□ -0.28
DDX39A-201ENST00000242776 CARFQ8N187 725 aa13.31□□□□□ -0.28
DDX39A-201ENST00000242776 MMGT1Q8N4V1 131 aa13.31□□□□□ -0.28
DDX39A-201ENST00000242776 ZNF655Q8N720 491 aaPredicted RBP13.31□□□□□ -0.28
DDX39A-201ENST00000242776 OR52E1Q8NGJ3 308 aa13.31□□□□□ -0.28
DDX39A-201ENST00000242776 TEKT5Q96M29 485 aa13.31□□□□□ -0.28
DDX39A-201ENST00000242776 IP6K3Q96PC2 410 aa13.31□□□□□ -0.28
DDX39A-201ENST00000242776 SRPK1Q96SB4 655 aaKnown RBP13.31□□□□□ -0.28
DDX39A-201ENST00000242776 BARD1Q99728 777 aaKnown RBP13.31□□□□□ -0.28
DDX39A-201ENST00000242776 DPH2Q9BQC3 489 aaPredicted RBP13.31□□□□□ -0.28
DDX39A-201ENST00000242776 FAM96AQ9H5X1 160 aa13.31□□□□□ -0.28
DDX39A-201ENST00000242776 SYTL2Q9HCH5 934 aa13.31□□□□□ -0.28
DDX39A-201ENST00000242776 ACTR10Q9NZ32 417 aa13.31□□□□□ -0.28
DDX39A-201ENST00000242776 FAM153AQ9UHL3 310 aa13.31□□□□□ -0.28
DDX39A-201ENST00000242776 RSPH14Q9UHP6 348 aa13.31□□□□□ -0.28
DDX39A-201ENST00000242776 ARL5AQ9Y689 179 aa13.31□□□□□ -0.28
DDX39A-201ENST00000242776 PDZD2O15018 2839 aa13.3□□□□□ -0.28
DDX39A-201ENST00000242776 CCDC78A2IDD5 438 aa13.3□□□□□ -0.28
DDX39A-201ENST00000242776 STX7O15400 261 aaKnown RBP13.3□□□□□ -0.28
DDX39A-201ENST00000242776 SLU7O95391 586 aaKnown RBP13.3□□□□□ -0.28
DDX39A-201ENST00000242776 KRT14P02533 472 aa13.3□□□□□ -0.28
DDX39A-201ENST00000242776 UMODP07911 640 aa13.3□□□□□ -0.28
DDX39A-201ENST00000242776 HBQ1P09105 142 aa13.3□□□□□ -0.28
DDX39A-201ENST00000242776 CD68P34810 354 aaPredicted RBP13.3□□□□□ -0.28
DDX39A-201ENST00000242776 HADHAP40939 763 aa13.3□□□□□ -0.28
DDX39A-201ENST00000242776 SRSF11Q05519 484 aaKnown RBP13.3□□□□□ -0.28
DDX39A-201ENST00000242776 PRPSAP1Q14558 356 aa13.3□□□□□ -0.28
DDX39A-201ENST00000242776 KDELC1Q6UW63 502 aa13.3□□□□□ -0.28
DDX39A-201ENST00000242776 SHISA6Q6ZSJ9 500 aa13.3□□□□□ -0.28
DDX39A-201ENST00000242776 CCDC110Q8TBZ0 833 aa13.3□□□□□ -0.28
DDX39A-201ENST00000242776 ZFPM2Q8WW38 1151 aa13.3□□□□□ -0.28
DDX39A-201ENST00000242776 LRRC45Q96CN5 670 aa13.3□□□□□ -0.28
DDX39A-201ENST00000242776 MAGEB10Q96LZ2 347 aaPredicted RBP13.3□□□□□ -0.28
DDX39A-201ENST00000242776 GBA3Q9H227 469 aa13.3□□□□□ -0.28
DDX39A-201ENST00000242776 TRABDQ9H4I3 376 aa13.3□□□□□ -0.28
DDX39A-201ENST00000242776 ASB8Q9H765 288 aa13.3□□□□□ -0.28
DDX39A-201ENST00000242776 RRAGDQ9NQL2 400 aaPredicted RBP13.3□□□□□ -0.28
DDX39A-201ENST00000242776 TXLNGQ9NUQ3 528 aa13.3□□□□□ -0.28
DDX39A-201ENST00000242776 FKBPLQ9UIM3 349 aa13.3□□□□□ -0.28
DDX39A-201ENST00000242776 FBXL4Q9UKA2 621 aa13.3□□□□□ -0.28
DDX39A-201ENST00000242776 ADGRG4Q8IZF6 3080 aa13.3□□□□□ -0.28
DDX39A-201ENST00000242776 LOC285095A0A1B0GVY8 99 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 C2orf74A8MZ97 194 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 MATN2O00339 956 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 NDC80O14777 642 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 FDFT1P37268 417 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 KCNK10P57789 538 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 DCDP81605 110 aaKnown RBP13.29□□□□□ -0.28
DDX39A-201ENST00000242776 TMPRSS15P98073 1019 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 PTK6Q13882 451 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 ZIC1Q15915 447 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 ZXDCQ2QGD7 858 aaPredicted RBP13.29□□□□□ -0.28
DDX39A-201ENST00000242776 GLE1Q53GS7 698 aaKnown RBP13.29□□□□□ -0.28
DDX39A-201ENST00000242776 ZDHHC20Q5W0Z9 365 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 LINC00696Q6ZRV3 163 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 AMIGO1Q86WK6 493 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 C19orf47Q8N9M1 422 aaKnown RBP13.29□□□□□ -0.28
DDX39A-201ENST00000242776 CATSPER1Q8NEC5 780 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 OR2Y1Q8NGV0 311 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 FAR1Q8WVX9 515 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 PTERQ96BW5 349 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 DCUN1D1Q96GG9 259 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 MRGPRX2Q96LB1 330 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 PITPNM3Q9BZ71 974 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 RAB17Q9H0T7 212 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 SLC6A20Q9NP91 592 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 ASIC3Q9UHC3 531 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 HEBP2Q9Y5Z4 205 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 CELSR1Q9NYQ6 3014 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 TTI1O43156 1089 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 RAD51CO43502 376 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 SGTAO43765 313 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 KLHL41O60662 606 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 IGHEP01854 428 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 EDN3P14138 238 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 ALAS2P22557 587 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 PDHA2P29803 388 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 AIMP2Q13155 320 aaKnown RBP13.29□□□□□ -0.28
DDX39A-201ENST00000242776 ZNF169Q14929 603 aaPredicted RBP13.29□□□□□ -0.28
DDX39A-201ENST00000242776 SLC1A5Q15758 541 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 ADGRF3Q8IZF5 1079 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 OR4K2Q8NGD2 314 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 OXNAD1Q96HP4 312 aaPredicted RBP13.29□□□□□ -0.28
DDX39A-201ENST00000242776 FCRL5Q96RD9 977 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 C17orf62Q9BQA9 187 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 APOL2Q9BQE5 337 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 CCM2Q9BSQ5 444 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms