RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 OR5B12Q96R08 314 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 POLR2J2Q9GZM3 115 aaKnown RBP10.91□□□□□ -0.66
MSH6-201ENST00000234420 SEMA3GQ9NS98 782 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 SLC17A7Q9P2U7 560 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 ABCD2Q9UBJ2 740 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 MYH13Q9UKX3 1938 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 KCNU1A8MYU2 1149 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 PDCD5O14737 125 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 AP2A1O95782 977 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 MAP2K5Q13163 448 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 DLG2Q15700 870 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 CPSF6Q16630 551 aaKnown RBP eCLIP10.91□□□□□ -0.66
MSH6-201ENST00000234420 PTF1AQ7RTS3 328 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 SNX29P2Q8IUI4 249 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 WDR49Q8IV35 697 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 TBC1D15Q8TC07 691 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 TBX5Q99593 518 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 FAM117AQ9C073 453 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 SMG9Q9H0W8 520 aaKnown RBP10.91□□□□□ -0.66
MSH6-201ENST00000234420 MAP4K5Q9Y4K4 846 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 CAMSAP1Q5T5Y3 1602 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 XPNPEP2O43895 674 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 EDF1O60869 148 aaKnown RBP10.9□□□□□ -0.66
MSH6-201ENST00000234420 MUTP22033 750 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 GRIA1P42261 906 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 UBAP2Q5T6F2 1119 aaKnown RBP10.9□□□□□ -0.66
MSH6-201ENST00000234420 FITM2Q8N6M3 262 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 FAM156AQ8NDB6 213 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 NLGN2Q8NFZ4 835 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 KLHL6Q8WZ60 621 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 RBM18Q96H35 190 aaKnown RBP10.9□□□□□ -0.66
MSH6-201ENST00000234420 MCCC1Q96RQ3 725 aaPredicted RBP10.9□□□□□ -0.66
MSH6-201ENST00000234420 BCO2Q9BYV7 579 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 GLOD4Q9HC38 313 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 FANCFQ9NPI8 374 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 OR2B3O76000 313 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 FABP3P05413 133 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 GSTT2P0CG29 244 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 JUNDP17535 347 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 KLF10Q13118 480 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 GPRIN3Q6ZVF9 776 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 MMAAQ8IVH4 418 aaKnown RBP10.9□□□□□ -0.66
MSH6-201ENST00000234420 GOLGA2P5Q9HBQ8 144 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 ANKEF1Q9NU02 776 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 NFATC1O95644 943 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 LAG3P18627 525 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 ANKDD1AQ495B1 522 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 KCNT2Q6UVM3 1135 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 SPATC1Q76KD6 591 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 VSIG10LQ86VR7 867 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 COMMD7Q86VX2 200 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 ARHGAP12Q8IWW6 846 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 TMED9Q9BVK6 235 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 TMEM185BQ9H7F4 350 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 METTL7AQ9H8H3 244 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 GDAP2Q9NXN4 497 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 KCND2Q9NZV8 630 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 HSBP1L1C9JCN9 74 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 TLR5O60602 858 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 TGFB3P10600 412 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 PEPDP12955 493 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 ADAM15Q13444 863 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 PRSS55Q6UWB4 352 aaPredicted RBP10.9□□□□□ -0.66
MSH6-201ENST00000234420 ZNF808Q8N4W9 903 aaPredicted RBP10.9□□□□□ -0.66
MSH6-201ENST00000234420 GRHL3Q8TE85 626 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 DPF1Q92782 380 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 NXPE2Q96DL1 559 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 BCAS3Q9H6U6 928 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 PCDHGC5Q9Y5F6 944 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 CDC123O75794 336 aaPredicted RBP10.9□□□□□ -0.66
MSH6-201ENST00000234420 EDN3P14138 238 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 MATN1P21941 496 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 HSD17B2P37059 387 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 GPD2P43304 727 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 LIMK2P53671 638 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 RAB4BP61018 213 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 AAK1Q2M2I8 961 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 ZNF674Q2M3X9 581 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 KIF18BQ86Y91 864 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 ECHDC2Q86YB7 292 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 KATNAL2Q8IYT4 538 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 CD101Q93033 1021 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 QRFPRQ96P65 431 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 OR51V1Q9H2C8 321 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 AMBNQ9NP70 447 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 PHPT1Q9NRX4 125 aaPredicted RBP10.9□□□□□ -0.66
MSH6-201ENST00000234420 HMGXB4Q9UGU5 601 aa10.9□□□□□ -0.66
MSH6-201ENST00000234420 SMIM30A4D0T7 59 aa10.9□□□□□ -0.67
MSH6-201ENST00000234420 HEXBP07686 556 aa10.9□□□□□ -0.67
MSH6-201ENST00000234420 DNAJA1P31689 397 aaKnown RBP10.9□□□□□ -0.67
MSH6-201ENST00000234420 EVI2BP34910 448 aa10.9□□□□□ -0.67
MSH6-201ENST00000234420 MAGEB1P43366 347 aa10.9□□□□□ -0.67
MSH6-201ENST00000234420 SCGB2A2Q13296 93 aa10.9□□□□□ -0.67
MSH6-201ENST00000234420 CARD16Q5EG05 197 aa10.9□□□□□ -0.67
MSH6-201ENST00000234420 ZNF529Q6P280 563 aa10.9□□□□□ -0.67
MSH6-201ENST00000234420 ARL14EPQ8N8R7 260 aaPredicted RBP10.9□□□□□ -0.67
MSH6-201ENST00000234420 ATAD1Q8NBU5 361 aa10.9□□□□□ -0.67
MSH6-201ENST00000234420 KCNJ9Q92806 393 aa10.9□□□□□ -0.67
MSH6-201ENST00000234420 PRICKLE1Q96MT3 831 aaPredicted RBP10.9□□□□□ -0.67
MSH6-201ENST00000234420 TTPALQ9BTX7 342 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms