RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 H0YAE9 185 aa11.28□□□□□ -0.6
CCND1-201ENST00000227507 AIREO43918 545 aa11.28□□□□□ -0.6
CCND1-201ENST00000227507 JRKO75564 520 aa11.28□□□□□ -0.6
CCND1-201ENST00000227507 CTGFP29279 349 aa11.28□□□□□ -0.6
CCND1-201ENST00000227507 EMX1Q04741 257 aaPredicted RBP11.28□□□□□ -0.6
CCND1-201ENST00000227507 ADHFE1Q8IWW8 467 aa11.28□□□□□ -0.6
CCND1-201ENST00000227507 ELMOD2Q8IZ81 293 aa11.28□□□□□ -0.6
CCND1-201ENST00000227507 CHDHQ8NE62 594 aaPredicted RBP11.28□□□□□ -0.6
CCND1-201ENST00000227507 HDAC2Q92769 488 aaKnown RBP11.28□□□□□ -0.6
CCND1-201ENST00000227507 TMEM125Q96AQ2 219 aa11.28□□□□□ -0.6
CCND1-201ENST00000227507 TEX37Q96LM6 180 aa11.28□□□□□ -0.6
CCND1-201ENST00000227507 TMEM209Q96SK2 561 aa11.28□□□□□ -0.6
CCND1-201ENST00000227507 TMEM246Q9BRR3 403 aa11.28□□□□□ -0.6
CCND1-201ENST00000227507 KIFC1Q9BW19 673 aa11.28□□□□□ -0.6
CCND1-201ENST00000227507 MAGEH1Q9H213 219 aa11.28□□□□□ -0.6
CCND1-201ENST00000227507 DSN1Q9H410 356 aa11.28□□□□□ -0.6
CCND1-201ENST00000227507 GKN1Q9NS71 199 aa11.28□□□□□ -0.6
CCND1-201ENST00000227507 PAK1IP1Q9NWT1 392 aaPredicted RBP11.28□□□□□ -0.6
CCND1-201ENST00000227507 KRT87PA6NCN2 255 aa11.27□□□□□ -0.6
CCND1-201ENST00000227507 FFAR3O14843 346 aa11.27□□□□□ -0.6
CCND1-201ENST00000227507 GPR42O15529 346 aa11.27□□□□□ -0.6
CCND1-201ENST00000227507 BEST1O76090 585 aa11.27□□□□□ -0.6
CCND1-201ENST00000227507 CLCN5P51795 746 aa11.27□□□□□ -0.6
CCND1-201ENST00000227507 OR2B6P58173 313 aa11.27□□□□□ -0.6
CCND1-201ENST00000227507 RACK1P63244 317 aaKnown RBP11.27□□□□□ -0.6
CCND1-201ENST00000227507 CATSPEREQ5SY80 951 aa11.27□□□□□ -0.6
CCND1-201ENST00000227507 ANKRD33Q7Z3H0 272 aa11.27□□□□□ -0.6
CCND1-201ENST00000227507 HORMAD1Q86X24 394 aa11.27□□□□□ -0.6
CCND1-201ENST00000227507 LRRC3Q9BY71 257 aa11.27□□□□□ -0.6
CCND1-201ENST00000227507 GSTO2Q9H4Y5 243 aa11.27□□□□□ -0.6
CCND1-201ENST00000227507 IGSF5Q9NSI5 407 aa11.27□□□□□ -0.6
CCND1-201ENST00000227507 MAGEL2Q9UJ55 1249 aa11.27□□□□□ -0.6
CCND1-201ENST00000227507 PRRC2BQ5JSZ5 2229 aaKnown RBP11.27□□□□□ -0.61
CCND1-201ENST00000227507 TTC34A8MYJ7 566 aa11.27□□□□□ -0.61
CCND1-201ENST00000227507 DNTTP04053 509 aa11.27□□□□□ -0.61
CCND1-201ENST00000227507 CD40LGP29965 261 aa11.27□□□□□ -0.61
CCND1-201ENST00000227507 IDH2P48735 452 aaKnown RBP11.27□□□□□ -0.61
CCND1-201ENST00000227507 HERVK_113P63132 956 aa11.27□□□□□ -0.61
CCND1-201ENST00000227507 ACOX1Q15067 660 aa11.27□□□□□ -0.61
CCND1-201ENST00000227507 FAM46CQ5VWP2 391 aa11.27□□□□□ -0.61
CCND1-201ENST00000227507 SIGIRRQ6IA17 410 aa11.27□□□□□ -0.61
CCND1-201ENST00000227507 ANGPTL8Q6UXH0 198 aa11.27□□□□□ -0.61
CCND1-201ENST00000227507 GRASPQ7Z6J2 395 aaPredicted RBP11.27□□□□□ -0.61
CCND1-201ENST00000227507 PROSER1Q86XN7 944 aa11.27□□□□□ -0.61
CCND1-201ENST00000227507 SLC38A6Q8IZM9 456 aa11.27□□□□□ -0.61
CCND1-201ENST00000227507 AMER2Q8N7J2 671 aa11.27□□□□□ -0.61
CCND1-201ENST00000227507 FAM120BQ96EK7 910 aaKnown RBP11.27□□□□□ -0.61
CCND1-201ENST00000227507 GPR78Q96P69 363 aa11.27□□□□□ -0.61
CCND1-201ENST00000227507 KCNS3Q9BQ31 491 aa11.27□□□□□ -0.61
CCND1-201ENST00000227507 C1QTNF7Q9BXJ2 289 aa11.27□□□□□ -0.61
CCND1-201ENST00000227507 ERVK-6Q9BXR3 956 aa11.27□□□□□ -0.61
CCND1-201ENST00000227507 ZCCHC2Q9C0B9 1178 aaKnown RBP11.27□□□□□ -0.61
CCND1-201ENST00000227507 PAK6Q9NQU5 681 aaPredicted RBP11.27□□□□□ -0.61
CCND1-201ENST00000227507 WBP11Q9Y2W2 641 aaKnown RBP11.27□□□□□ -0.61
CCND1-201ENST00000227507 ZFP37Q9Y6Q3 630 aaPredicted RBP11.27□□□□□ -0.61
CCND1-201ENST00000227507 GOLGA4Q13439 2230 aaKnown RBP11.27□□□□□ -0.61
CCND1-201ENST00000227507 IGFBP5P24593 272 aa11.27□□□□□ -0.61
CCND1-201ENST00000227507 TOP3AQ13472 1001 aaPredicted RBP11.27□□□□□ -0.61
CCND1-201ENST00000227507 SMN1Q16637 294 aaKnown RBP11.27□□□□□ -0.61
CCND1-201ENST00000227507 XAF1Q6GPH4 301 aa11.27□□□□□ -0.61
CCND1-201ENST00000227507 DTWD1Q8N5C7 304 aa11.27□□□□□ -0.61
CCND1-201ENST00000227507 LINC01465Q8N7H1 131 aa11.27□□□□□ -0.61
CCND1-201ENST00000227507 RTL3Q8N8U3 475 aaKnown RBP11.27□□□□□ -0.61
CCND1-201ENST00000227507 FAM83FQ8NEG4 500 aaPredicted RBP11.27□□□□□ -0.61
CCND1-201ENST00000227507 DOK1Q99704 481 aa11.27□□□□□ -0.61
CCND1-201ENST00000227507 RBM4BQ9BQ04 359 aaKnown RBP11.27□□□□□ -0.61
CCND1-201ENST00000227507 RBM4Q9BWF3 364 aaKnown RBP11.27□□□□□ -0.61
CCND1-201ENST00000227507 KAT8Q9H7Z6 458 aaKnown RBP11.27□□□□□ -0.61
CCND1-201ENST00000227507 C8orf4Q9NR00 106 aa11.27□□□□□ -0.61
CCND1-201ENST00000227507 GALPQ9UBC7 116 aa11.27□□□□□ -0.61
CCND1-201ENST00000227507 SLCO3A1Q9UIG8 710 aa11.27□□□□□ -0.61
CCND1-201ENST00000227507 M0QZQ0 153 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 RGS10O43665 173 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 UGT2B11O75310 529 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 MT-ND2P03891 347 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 CYP11A1P05108 521 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 LCKP06239 509 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 ITIH1P19827 911 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 ADARB1P78563 741 aaKnown RBP11.26□□□□□ -0.61
CCND1-201ENST00000227507 PAFAH1B3Q15102 231 aaKnown RBP11.26□□□□□ -0.61
CCND1-201ENST00000227507 CEP78Q5JTW2 689 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 SNAP47Q5SQN1 464 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 ADGRF1Q5T601 910 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 KIAA1324Q6UXG2 1013 aaKnown RBP11.26□□□□□ -0.61
CCND1-201ENST00000227507 SAMD14Q8IZD0 417 aaPredicted RBP11.26□□□□□ -0.61
CCND1-201ENST00000227507 NATD1Q8N6N6 113 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 MINDY2Q8NBR6 621 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 ADAMTS16Q8TE57 1224 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 MOV10Q9HCE1 1003 aaKnown RBP11.26□□□□□ -0.61
CCND1-201ENST00000227507 LOC110117498-PIK3R3F6TDL0 507 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 DYRK3O43781 588 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 NUAK1O60285 661 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 WDR47O94967 919 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 GUCA1CO95843 209 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 CTSAP10619 480 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 CDKN2DP55273 166 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 DNAJB13P59910 316 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 TSNQ15631 228 aaKnown RBP11.26□□□□□ -0.61
CCND1-201ENST00000227507 BLOC1S3Q6QNY0 202 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 SLC39A11Q8N1S5 342 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms