RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 TSPAN14Q8NG11 270 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 ELMO1Q92556 727 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 SMARCD2Q92925 531 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 SAMD11Q96NU1 681 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 UCN2Q96RP3 112 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 RIOK2Q9BVS4 552 aaKnown RBP8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 AKTIPQ9H8T0 292 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 ZFP14Q9HCL3 533 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 ARL15Q9NXU5 204 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 CHD7Q9P2D1 2997 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 CEPT1Q9Y6K0 416 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 C16orf96A6NNT2 1141 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 UPK3BL1B0FP48 263 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 UPK3BL2E5RIL1 263 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 NR5A2O00482 541 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 LZTS3O60299 673 aaPredicted RBP8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 WISP3O95389 354 aaPredicted RBP8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 ABCB1P08183 1280 aaPredicted RBP8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 C1SP09871 688 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 PRDX3P30048 256 aaKnown RBP8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 VIPR1P32241 457 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 PIK3CGP48736 1102 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 HK3P52790 923 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 NFKB2Q00653 900 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 STX5Q13190 355 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 SYTL3Q4VX76 610 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 IGSF11Q5DX21 431 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 C6orf52Q5T4I8 152 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 GPRC6AQ5T6X5 926 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 NDUFAF5Q5TEU4 345 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 HSD11B1LQ7Z5J1 315 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 DSELQ8IZU8 1212 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 OR9I1Q8NGQ6 314 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 GIPC3Q8TF64 312 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 SUSD6Q92537 303 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 TIFAQ96CG3 184 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 RSPRY1Q96DX4 576 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 LMLNQ96KR4 655 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 C3orf30Q96M34 536 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 MEAF6Q9HAF1 191 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 SCPEP1Q9HB40 452 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 ZBTB26Q9HCK0 441 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 EPS15L1Q9UBC2 864 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 CNOT11Q9UKZ1 510 aaKnown RBP8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 FUOMA2VDF0 154 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 WASH3PC4AMC7 463 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 PLK4O00444 970 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 GAPDHSO14556 408 aaPredicted RBP8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 FFAR3O14843 346 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 GPR42O15529 346 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 TSPAN12O95859 305 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 LBPP18428 481 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 ME2P23368 584 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 PCSK6P29122 969 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 CDK9P50750 372 aaKnown RBP8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 NUP107P57740 925 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 ERVK-21P61565 698 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 GALNT1Q10472 559 aaPredicted RBP8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 SQLEQ14534 574 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 ZNF805Q5CZA5 627 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 PAOXQ6QHF9 649 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 IL27RAQ6UWB1 636 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 TICAM1Q8IUC6 712 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 CADM3Q8N126 398 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 CBARPQ8N350 705 aaPredicted RBP8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 WFIKKN2Q8TEU8 576 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 NXPE3Q969Y0 559 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 AP2M1Q96CW1 435 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 C1orf50Q9BV19 199 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 PBX4Q9BYU1 374 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 IPPKQ9H8X2 491 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 WDR41Q9HAD4 459 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 PLGRKTQ9HBL7 147 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 NUDT4Q9NZJ9 180 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 OPTCQ9UBM4 332 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 RIMS3Q9UJD0 308 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 COQ6Q9Y2Z9 468 aa8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 TNPO3Q9Y5L0 923 aaKnown RBP8.71□□□□□ -1.02
MTHFD1-201ENST00000216605 OBSL1O75147 1896 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 A0A1B0GTL3 188 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 TRIM64A6NGJ6 449 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 TRIM64BA6NI03 449 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 ICMTO60725 284 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 EPHX1P07099 455 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 ZNF23P17027 643 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 NAGAP17050 411 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 HAAOP46952 286 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 STT3AP46977 705 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 GRIN2CQ14957 1233 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 KCTD21Q4G0X4 260 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 ZDHHC20Q5W0Z9 365 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 MBOAT1Q6ZNC8 495 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 SYVN1Q86TM6 617 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 BEND7Q8N7W2 519 aaPredicted RBP8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 OR52B6Q8NGF0 335 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 OR8D1Q8WZ84 308 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 EME1Q96AY2 570 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 ECHDC3Q96DC8 303 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 EHD1Q9H4M9 534 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms