RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 HMGB2P26583 209 aaKnown RBP13.33□□□□□ -0.28
PHGDH-224ENST00000641711 BAG6P46379 1132 aa13.33□□□□□ -0.28
PHGDH-224ENST00000641711 CCDC146Q8IYE0 955 aa13.33□□□□□ -0.28
PHGDH-224ENST00000641711 RUNDC1Q96C34 613 aa13.33□□□□□ -0.28
PHGDH-224ENST00000641711 ZNF831Q5JPB2 1677 aa13.33□□□□□ -0.28
PHGDH-224ENST00000641711 RREB1Q92766 1687 aa13.33□□□□□ -0.28
PHGDH-224ENST00000641711 LY75O60449 1722 aa13.33□□□□□ -0.28
PHGDH-224ENST00000641711 CEMIPQ8WUJ3 1361 aa13.32□□□□□ -0.28
PHGDH-224ENST00000641711 PAPPAQ13219 1627 aa13.32□□□□□ -0.28
PHGDH-224ENST00000641711 GNAT3A8MTJ3 354 aa13.32□□□□□ -0.28
PHGDH-224ENST00000641711 E9PSI1 815 aa13.32□□□□□ -0.28
PHGDH-224ENST00000641711 LMOD3Q0VAK6 560 aa13.32□□□□□ -0.28
PHGDH-224ENST00000641711 NFE2L2Q16236 605 aa13.32□□□□□ -0.28
PHGDH-224ENST00000641711 FAM182BQ5T319 152 aa13.32□□□□□ -0.28
PHGDH-224ENST00000641711 B4GALNT3Q6L9W6 998 aa13.32□□□□□ -0.28
PHGDH-224ENST00000641711 CICQ96RK0 1608 aaPredicted RBP13.31□□□□□ -0.28
PHGDH-224ENST00000641711 PLSCR1O15162 318 aa13.31□□□□□ -0.28
PHGDH-224ENST00000641711 TRIM37O94972 964 aa13.31□□□□□ -0.28
PHGDH-224ENST00000641711 CCDC27Q2M243 656 aa13.31□□□□□ -0.28
PHGDH-224ENST00000641711 PHACTR3Q96KR7 559 aa13.31□□□□□ -0.28
PHGDH-224ENST00000641711 RTF1Q92541 710 aaKnown RBP13.3□□□□□ -0.28
PHGDH-224ENST00000641711 SMARCC1Q92922 1105 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-224ENST00000641711 TMOD3Q9NYL9 352 aa13.3□□□□□ -0.28
PHGDH-224ENST00000641711 RNMTO43148 476 aaKnown RBP13.29□□□□□ -0.28
PHGDH-224ENST00000641711 UBR2Q8IWV8 1755 aa13.29□□□□□ -0.28
PHGDH-224ENST00000641711 PRIM1P49642 420 aaKnown RBP13.28□□□□□ -0.28
PHGDH-224ENST00000641711 WWC1Q8IX03 1113 aa13.28□□□□□ -0.28
PHGDH-224ENST00000641711 ACSBG1Q96GR2 724 aa13.28□□□□□ -0.28
PHGDH-224ENST00000641711 CCDC136Q96JN2 1154 aa13.28□□□□□ -0.28
PHGDH-224ENST00000641711 NUP188Q5SRE5 1749 aa13.27□□□□□ -0.28
PHGDH-224ENST00000641711 APBA3O96018 575 aa13.27□□□□□ -0.29
PHGDH-224ENST00000641711 TMPOP42166 694 aaKnown RBP13.27□□□□□ -0.29
PHGDH-224ENST00000641711 CABP4P57796 275 aa13.27□□□□□ -0.29
PHGDH-224ENST00000641711 MPRIPQ6WCQ1 1025 aa13.27□□□□□ -0.29
PHGDH-224ENST00000641711 WDR63Q8IWG1 891 aa13.27□□□□□ -0.29
PHGDH-224ENST00000641711 SLC52A2Q9HAB3 445 aa13.27□□□□□ -0.29
PHGDH-224ENST00000641711 KCNQ2O43526 872 aa13.26□□□□□ -0.29
PHGDH-224ENST00000641711 TEFQ10587 303 aa13.26□□□□□ -0.29
PHGDH-224ENST00000641711 SLC27A3Q5K4L6 730 aa13.26□□□□□ -0.29
PHGDH-224ENST00000641711 PPP4R3CPQ6ZMV5 832 aa13.26□□□□□ -0.29
PHGDH-224ENST00000641711 TAF1LQ8IZX4 1826 aa13.26□□□□□ -0.29
PHGDH-224ENST00000641711 SYTL4Q96C24 671 aaPredicted RBP13.26□□□□□ -0.29
PHGDH-224ENST00000641711 KDM3BQ7LBC6 1761 aa13.25□□□□□ -0.29
PHGDH-224ENST00000641711 PALLDQ8WX93 1383 aa13.25□□□□□ -0.29
PHGDH-224ENST00000641711 EXOC6Q8TAG9 804 aa13.25□□□□□ -0.29
PHGDH-224ENST00000641711 PIGBQ92521 554 aa13.25□□□□□ -0.29
PHGDH-224ENST00000641711 CAMKK2Q96RR4 588 aa13.25□□□□□ -0.29
PHGDH-224ENST00000641711 SPINK5Q9NQ38 1064 aaPredicted RBP13.25□□□□□ -0.29
PHGDH-224ENST00000641711 RIPK4P57078 832 aa13.24□□□□□ -0.29
PHGDH-224ENST00000641711 CALD1Q05682 793 aaKnown RBP13.24□□□□□ -0.29
PHGDH-224ENST00000641711 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.24□□□□□ -0.29
PHGDH-224ENST00000641711 IL17REQ8NFR9 667 aa13.24□□□□□ -0.29
PHGDH-224ENST00000641711 BABAM1Q9NWV8 329 aa13.24□□□□□ -0.29
PHGDH-224ENST00000641711 QSER1Q2KHR3 1735 aa13.24□□□□□ -0.29
PHGDH-224ENST00000641711 C5P01031 1676 aa13.24□□□□□ -0.29
PHGDH-224ENST00000641711 LGR6Q9HBX8 967 aa13.23□□□□□ -0.29
PHGDH-224ENST00000641711 NFATC2IPQ8NCF5 419 aa13.22□□□□□ -0.29
PHGDH-224ENST00000641711 RBM19Q9Y4C8 960 aaKnown RBP13.22□□□□□ -0.29
PHGDH-224ENST00000641711 KCPQ6ZWJ8 1503 aa13.22□□□□□ -0.29
PHGDH-224ENST00000641711 COL5A3P25940 1745 aaPredicted RBP13.22□□□□□ -0.29
PHGDH-224ENST00000641711 EN1Q05925 392 aaPredicted RBP13.21□□□□□ -0.29
PHGDH-224ENST00000641711 PTF1AQ7RTS3 328 aa13.21□□□□□ -0.29
PHGDH-224ENST00000641711 LAMB4A4D0S4 1761 aa13.2□□□□□ -0.3
PHGDH-224ENST00000641711 TJP1Q07157 1748 aa13.2□□□□□ -0.3
PHGDH-224ENST00000641711 PLIN1O60240 522 aa13.2□□□□□ -0.3
PHGDH-224ENST00000641711 TAF7Q15545 349 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-224ENST00000641711 TXNRD1Q16881 649 aa13.2□□□□□ -0.3
PHGDH-224ENST00000641711 MCM10Q7L590 875 aa13.2□□□□□ -0.3
PHGDH-224ENST00000641711 DEFB132Q7Z7B7 95 aa13.2□□□□□ -0.3
PHGDH-224ENST00000641711 TTC5Q8N0Z6 440 aa13.2□□□□□ -0.3
PHGDH-224ENST00000641711 VSIG10Q8N0Z9 540 aa13.2□□□□□ -0.3
PHGDH-224ENST00000641711 CRBNQ96SW2 442 aa13.2□□□□□ -0.3
PHGDH-224ENST00000641711 ATG3Q9NT62 314 aa13.2□□□□□ -0.3
PHGDH-224ENST00000641711 IL16Q14005 1332 aa13.19□□□□□ -0.3
PHGDH-224ENST00000641711 LOC102724428A0A0B4J2F2 783 aa13.19□□□□□ -0.3
PHGDH-224ENST00000641711 SIK1P57059 783 aa13.19□□□□□ -0.3
PHGDH-224ENST00000641711 EZH2Q15910 746 aaKnown RBP13.19□□□□□ -0.3
PHGDH-224ENST00000641711 ASAP1Q9ULH1 1129 aa13.19□□□□□ -0.3
PHGDH-224ENST00000641711 TRIM35Q9UPQ4 493 aa13.19□□□□□ -0.3
PHGDH-224ENST00000641711 C4BP0C0L5 1744 aa13.19□□□□□ -0.3
PHGDH-224ENST00000641711 ZNF790Q6PG37 636 aa13.18□□□□□ -0.3
PHGDH-224ENST00000641711 MYH16Q9H6N6 1097 aa13.18□□□□□ -0.3
PHGDH-224ENST00000641711 CCNL1Q9UK58 526 aaPredicted RBP13.18□□□□□ -0.3
PHGDH-224ENST00000641711 RRP7AQ9Y3A4 280 aaKnown RBP13.18□□□□□ -0.3
PHGDH-224ENST00000641711 BTBD11A6QL63 1104 aa13.17□□□□□ -0.3
PHGDH-224ENST00000641711 CT47B1P0C2W7 299 aaPredicted RBP13.17□□□□□ -0.3
PHGDH-224ENST00000641711 DCTN1Q14203 1278 aa13.17□□□□□ -0.3
PHGDH-224ENST00000641711 NBPF14Q5TI25 921 aa13.17□□□□□ -0.3
PHGDH-224ENST00000641711 UBR3Q6ZT12 1888 aa13.16□□□□□ -0.3
PHGDH-224ENST00000641711 PDE3AQ14432 1141 aa13.16□□□□□ -0.3
PHGDH-224ENST00000641711 NEUROD2Q15784 382 aa13.16□□□□□ -0.3
PHGDH-224ENST00000641711 C20orf194Q5TEA3 1177 aa13.16□□□□□ -0.3
PHGDH-224ENST00000641711 PROM2Q8N271 834 aa13.16□□□□□ -0.3
PHGDH-224ENST00000641711 CFAP44Q96MT7 982 aa13.16□□□□□ -0.3
PHGDH-224ENST00000641711 FMNL2Q96PY5 1086 aa13.16□□□□□ -0.3
PHGDH-224ENST00000641711 TEX13AQ9BXU3 409 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-224ENST00000641711 IFT57Q9NWB7 429 aa13.16□□□□□ -0.3
PHGDH-224ENST00000641711 HEG1Q9ULI3 1381 aa13.16□□□□□ -0.3
PHGDH-224ENST00000641711 TUBGCP6Q96RT7 1819 aa13.16□□□□□ -0.3
PHGDH-224ENST00000641711 CNTNAP4Q9C0A0 1308 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms