RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 CCDC173Q0VFZ6 552 aa20.25■□□□□ 0.83
HNRNPU-228ENST00000640306 RBSNQ9H1K0 784 aa20.25■□□□□ 0.83
HNRNPU-228ENST00000640306 GNAI2P04899 355 aa20.24■□□□□ 0.83
HNRNPU-228ENST00000640306 LTV1Q96GA3 475 aaPredicted RBP20.24■□□□□ 0.83
HNRNPU-228ENST00000640306 STK31Q9BXU1 1019 aa20.24■□□□□ 0.83
HNRNPU-228ENST00000640306 TMX3Q96JJ7 454 aa20.23■□□□□ 0.83
HNRNPU-228ENST00000640306 PTPRUQ92729 1446 aa20.23■□□□□ 0.83
HNRNPU-228ENST00000640306 UPF3BQ9BZI7 483 aaKnown RBP20.23■□□□□ 0.83
HNRNPU-228ENST00000640306 IL1RAPL2Q9NP60 686 aa20.23■□□□□ 0.83
HNRNPU-228ENST00000640306 EYA1Q99502 592 aa20.23■□□□□ 0.83
HNRNPU-228ENST00000640306 MON2Q7Z3U7 1717 aa20.22■□□□□ 0.83
HNRNPU-228ENST00000640306 MAP4K4O95819 1239 aaPredicted RBP20.22■□□□□ 0.83
HNRNPU-228ENST00000640306 CCT4P50991 539 aaKnown RBP20.22■□□□□ 0.83
HNRNPU-228ENST00000640306 CWC22Q9HCG8 908 aaKnown RBP20.22■□□□□ 0.83
HNRNPU-228ENST00000640306 AMOTL2Q9Y2J4 779 aa20.22■□□□□ 0.83
HNRNPU-228ENST00000640306 FLIIQ13045 1269 aa20.22■□□□□ 0.83
HNRNPU-228ENST00000640306 UNC5CLQ8IV45 518 aa20.21■□□□□ 0.83
HNRNPU-228ENST00000640306 NGDNQ8NEJ9 315 aaKnown RBP20.21■□□□□ 0.83
HNRNPU-228ENST00000640306 LRRCC1Q9C099 1032 aa20.21■□□□□ 0.83
HNRNPU-228ENST00000640306 ARHGAP23Q9P227 1491 aa20.21■□□□□ 0.83
HNRNPU-228ENST00000640306 SYCE3A1L190 88 aa20.21■□□□□ 0.83
HNRNPU-228ENST00000640306 MX1P20591 662 aa20.21■□□□□ 0.83
HNRNPU-228ENST00000640306 LRRFIP2Q9Y608 721 aaKnown RBP20.21■□□□□ 0.83
HNRNPU-228ENST00000640306 SLIT1O75093 1534 aa20.2■□□□□ 0.82
HNRNPU-228ENST00000640306 RNF214Q8ND24 703 aa20.2■□□□□ 0.82
HNRNPU-228ENST00000640306 UBE2Q2Q8WVN8 375 aa20.2■□□□□ 0.82
HNRNPU-228ENST00000640306 OVOS2A0A0J9YW53 1432 aa20.2■□□□□ 0.82
HNRNPU-228ENST00000640306 OVOS2Q6IE36 1432 aa20.2■□□□□ 0.82
HNRNPU-228ENST00000640306 ESYT1Q9BSJ8 1104 aa20.2■□□□□ 0.82
HNRNPU-228ENST00000640306 TMEM63CQ9P1W3 806 aa20.2■□□□□ 0.82
HNRNPU-228ENST00000640306 PPP1R9BQ96SB3 815 aa20.2■□□□□ 0.82
HNRNPU-228ENST00000640306 ITSN1Q15811 1721 aa20.19■□□□□ 0.82
HNRNPU-228ENST00000640306 USP6P35125 1406 aa20.19■□□□□ 0.82
HNRNPU-228ENST00000640306 ZNF445P59923 1031 aa20.19■□□□□ 0.82
HNRNPU-228ENST00000640306 CEP170BQ9Y4F5 1589 aaPredicted RBP20.19■□□□□ 0.82
HNRNPU-228ENST00000640306 RBM33Q96EV2 1170 aaKnown RBP20.19■□□□□ 0.82
HNRNPU-228ENST00000640306 GDPD2Q9HCC8 539 aa20.19■□□□□ 0.82
HNRNPU-228ENST00000640306 PEAK1Q9H792 1746 aa20.18■□□□□ 0.82
HNRNPU-228ENST00000640306 NUTM1Q86Y26 1132 aa20.18■□□□□ 0.82
HNRNPU-228ENST00000640306 MSNP26038 577 aaKnown RBP20.18■□□□□ 0.82
HNRNPU-228ENST00000640306 IL25Q9H293 177 aa20.18■□□□□ 0.82
HNRNPU-228ENST00000640306 TECPR2O15040 1411 aa20.18■□□□□ 0.82
HNRNPU-228ENST00000640306 PLEKHG3A1L390 1219 aa20.17■□□□□ 0.82
HNRNPU-228ENST00000640306 DTNBO60941 627 aa20.17■□□□□ 0.82
HNRNPU-228ENST00000640306 ZSCAN30Q86W11 494 aa20.17■□□□□ 0.82
HNRNPU-228ENST00000640306 USHBP1Q8N6Y0 703 aa20.17■□□□□ 0.82
HNRNPU-228ENST00000640306 LARP6Q9BRS8 491 aaKnown RBP20.17■□□□□ 0.82
HNRNPU-228ENST00000640306 OSBPL3Q9H4L5 887 aa20.17■□□□□ 0.82
HNRNPU-228ENST00000640306 ADAMTSL3P82987 1691 aa20.16■□□□□ 0.82
HNRNPU-228ENST00000640306 PLEKHG5O94827 1062 aa20.16■□□□□ 0.82
HNRNPU-228ENST00000640306 CHMLP26374 656 aa20.16■□□□□ 0.82
HNRNPU-228ENST00000640306 SIRT1Q96EB6 747 aa20.16■□□□□ 0.82
HNRNPU-228ENST00000640306 TBX22Q9Y458 520 aa20.16■□□□□ 0.82
HNRNPU-228ENST00000640306 AKAP12Q02952 1782 aa20.16■□□□□ 0.82
HNRNPU-228ENST00000640306 NLRP6P59044 892 aa20.16■□□□□ 0.82
HNRNPU-228ENST00000640306 HSP90AA2PQ14568 343 aaPredicted RBP20.16■□□□□ 0.82
HNRNPU-228ENST00000640306 IBTKQ9P2D0 1353 aaPredicted RBP20.15■□□□□ 0.82
HNRNPU-228ENST00000640306 KIAA1211Q6ZU35 1233 aa20.15■□□□□ 0.82
HNRNPU-228ENST00000640306 C14orf37Q86TY3 774 aa20.15■□□□□ 0.82
HNRNPU-228ENST00000640306 NRKQ7Z2Y5 1582 aa20.15■□□□□ 0.82
HNRNPU-228ENST00000640306 KCNA6P17658 529 aa20.14■□□□□ 0.82
HNRNPU-228ENST00000640306 CCDC30Q5VVM6 783 aa20.14■□□□□ 0.82
HNRNPU-228ENST00000640306 PHAXQ9H814 394 aaKnown RBP20.14■□□□□ 0.82
HNRNPU-228ENST00000640306 ZBTB7CA1YPR0 619 aa20.14■□□□□ 0.81
HNRNPU-228ENST00000640306 EIF2S2P20042 333 aaKnown RBP20.14■□□□□ 0.81
HNRNPU-228ENST00000640306 GNAI3P08754 354 aa20.13■□□□□ 0.81
HNRNPU-228ENST00000640306 MCCP23508 829 aa20.13■□□□□ 0.81
HNRNPU-228ENST00000640306 ATP8B2P98198 1209 aa20.13■□□□□ 0.81
HNRNPU-228ENST00000640306 SALL3Q9BXA9 1300 aa20.13■□□□□ 0.81
HNRNPU-228ENST00000640306 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.13■□□□□ 0.81
HNRNPU-228ENST00000640306 ANKLE2Q86XL3 938 aa20.13■□□□□ 0.81
HNRNPU-228ENST00000640306 FLT4P35916 1363 aa20.12■□□□□ 0.81
HNRNPU-228ENST00000640306 IL17REQ8NFR9 667 aa20.12■□□□□ 0.81
HNRNPU-228ENST00000640306 ARHGEF10O15013 1369 aa20.12■□□□□ 0.81
HNRNPU-228ENST00000640306 GNAT3A8MTJ3 354 aa20.12■□□□□ 0.81
HNRNPU-228ENST00000640306 MPNDQ8N594 471 aa20.12■□□□□ 0.81
HNRNPU-228ENST00000640306 UBTFL1P0CB47 393 aaPredicted RBP20.11■□□□□ 0.81
HNRNPU-228ENST00000640306 XPCQ01831 940 aaPredicted RBP20.11■□□□□ 0.81
HNRNPU-228ENST00000640306 USP44Q9H0E7 712 aa20.11■□□□□ 0.81
HNRNPU-228ENST00000640306 USP31Q70CQ4 1352 aa20.11■□□□□ 0.81
HNRNPU-228ENST00000640306 SURF6O75683 361 aaKnown RBP20.11■□□□□ 0.81
HNRNPU-228ENST00000640306 ANXA1P04083 346 aa20.1■□□□□ 0.81
HNRNPU-228ENST00000640306 BRD1O95696 1058 aa20.09■□□□□ 0.81
HNRNPU-228ENST00000640306 HDGFL1Q5TGJ6 251 aa20.09■□□□□ 0.81
HNRNPU-228ENST00000640306 LRSAM1Q6UWE0 723 aa20.09■□□□□ 0.81
HNRNPU-228ENST00000640306 SBNO1A3KN83 1393 aa20.09■□□□□ 0.81
HNRNPU-228ENST00000640306 IGSF1Q8N6C5 1336 aa20.09■□□□□ 0.81
HNRNPU-228ENST00000640306 GADD45BO75293 160 aaPredicted RBP20.09■□□□□ 0.81
HNRNPU-228ENST00000640306 PPP1R42Q7Z4L9 355 aa20.08■□□□□ 0.81
HNRNPU-228ENST00000640306 R3HCC1Q9Y3T6 440 aaKnown RBP20.07■□□□□ 0.8
HNRNPU-228ENST00000640306 CPA1P15085 419 aa20.06■□□□□ 0.8
HNRNPU-228ENST00000640306 CUL4AQ13619 759 aa20.06■□□□□ 0.8
HNRNPU-228ENST00000640306 KDRP35968 1356 aa20.06■□□□□ 0.8
HNRNPU-228ENST00000640306 SRGAP3O43295 1099 aa20.06■□□□□ 0.8
HNRNPU-228ENST00000640306 HOXC9P31274 260 aa20.06■□□□□ 0.8
HNRNPU-228ENST00000640306 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.06■□□□□ 0.8
HNRNPU-228ENST00000640306 NBPF7P0C2Y1 421 aaPredicted RBP20.05■□□□□ 0.8
HNRNPU-228ENST00000640306 MCM2P49736 904 aa20.05■□□□□ 0.8
HNRNPU-228ENST00000640306 RBM10P98175 930 aaKnown RBP20.05■□□□□ 0.8
HNRNPU-228ENST00000640306 TAF7Q15545 349 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms