RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 RBM10P98175 930 aaKnown RBP17.13■□□□□ 0.33
SCARB2-216ENST00000639300 SART3Q15020 963 aaKnown RBP17.13■□□□□ 0.33
SCARB2-216ENST00000639300 JARID2Q92833 1246 aaPredicted RBP17.13■□□□□ 0.33
SCARB2-216ENST00000639300 SPATA32Q96LK8 384 aa17.13■□□□□ 0.33
SCARB2-216ENST00000639300 ZSCAN31Q96LW9 406 aaPredicted RBP17.13■□□□□ 0.33
SCARB2-216ENST00000639300 COL17A1Q9UMD9 1497 aaPredicted RBP17.12■□□□□ 0.33
SCARB2-216ENST00000639300 AMOTQ4VCS5 1084 aa17.12■□□□□ 0.33
SCARB2-216ENST00000639300 PDILTQ8N807 584 aa17.11■□□□□ 0.33
SCARB2-216ENST00000639300 A0A1W2PP64 1363 aa17.11■□□□□ 0.33
SCARB2-216ENST00000639300 ANKRD20A12PQ8NF67 263 aa17.11■□□□□ 0.33
SCARB2-216ENST00000639300 ZNF396Q96N95 335 aaPredicted RBP17.11■□□□□ 0.33
SCARB2-216ENST00000639300 ZBTB40Q9NUA8 1239 aa17.11■□□□□ 0.33
SCARB2-216ENST00000639300 SHANK2Q9UPX8 1470 aa17.11■□□□□ 0.33
SCARB2-216ENST00000639300 SMC2O95347 1197 aa17.11■□□□□ 0.33
SCARB2-216ENST00000639300 MPHOSPH8Q99549 860 aa17.11■□□□□ 0.33
SCARB2-216ENST00000639300 ANKRD44Q8N8A2 993 aa17.1■□□□□ 0.33
SCARB2-216ENST00000639300 IDH1O75874 414 aaKnown RBP17.1■□□□□ 0.33
SCARB2-216ENST00000639300 PPP6R1Q9UPN7 881 aa17.1■□□□□ 0.33
SCARB2-216ENST00000639300 MAP3K2Q9Y2U5 619 aa17.1■□□□□ 0.33
SCARB2-216ENST00000639300 SPATA31E1Q6ZUB1 1445 aa17.1■□□□□ 0.33
SCARB2-216ENST00000639300 IPO7O95373 1038 aaKnown RBP17.09■□□□□ 0.33
SCARB2-216ENST00000639300 OLFM4Q6UX06 510 aa17.09■□□□□ 0.33
SCARB2-216ENST00000639300 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.09■□□□□ 0.33
SCARB2-216ENST00000639300 A0A087WZG4 1122 aa17.09■□□□□ 0.33
SCARB2-216ENST00000639300 ATP5J2-PTCD1G3V325 749 aa17.09■□□□□ 0.33
SCARB2-216ENST00000639300 BAG4O95429 457 aaKnown RBP17.09■□□□□ 0.33
SCARB2-216ENST00000639300 WDR7Q9Y4E6 1490 aa17.09■□□□□ 0.33
SCARB2-216ENST00000639300 CAMK4Q16566 473 aa17.09■□□□□ 0.33
SCARB2-216ENST00000639300 SMC5Q8IY18 1101 aa17.09■□□□□ 0.33
SCARB2-216ENST00000639300 ECHDC1Q9NTX5 307 aa17.09■□□□□ 0.33
SCARB2-216ENST00000639300 KRT32Q14532 448 aa17.08■□□□□ 0.33
SCARB2-216ENST00000639300 GOLGA6L1Q8N7Z2 621 aa17.08■□□□□ 0.33
SCARB2-216ENST00000639300 PPIP5K1Q6PFW1 1433 aa17.08■□□□□ 0.33
SCARB2-216ENST00000639300 MTHFSDQ2M296 383 aaKnown RBP17.08■□□□□ 0.32
SCARB2-216ENST00000639300 SAMD1Q6SPF0 538 aaPredicted RBP17.08■□□□□ 0.32
SCARB2-216ENST00000639300 RNF123Q5XPI4 1314 aa17.08■□□□□ 0.32
SCARB2-216ENST00000639300 ZNF518AQ6AHZ1 1483 aa17.08■□□□□ 0.32
SCARB2-216ENST00000639300 XBP1P17861 261 aa17.08■□□□□ 0.32
SCARB2-216ENST00000639300 PDE1AP54750 535 aa17.08■□□□□ 0.32
SCARB2-216ENST00000639300 NUP62CLQ9H1M0 184 aa17.08■□□□□ 0.32
SCARB2-216ENST00000639300 NUTM2BA6NNL0 878 aaPredicted RBP17.08■□□□□ 0.32
SCARB2-216ENST00000639300 NUTM2EB1AL46 878 aaPredicted RBP17.08■□□□□ 0.32
SCARB2-216ENST00000639300 NUTM2AQ8IVF1 878 aaPredicted RBP17.08■□□□□ 0.32
SCARB2-216ENST00000639300 PUS7Q96PZ0 661 aaKnown RBP17.07■□□□□ 0.32
SCARB2-216ENST00000639300 LIMCH1Q9UPQ0 1083 aa17.07■□□□□ 0.32
SCARB2-216ENST00000639300 ADGRL2O95490 1459 aa17.07■□□□□ 0.32
SCARB2-216ENST00000639300 CHRNA2Q15822 529 aa17.07■□□□□ 0.32
SCARB2-216ENST00000639300 RHPN1Q8TCX5 695 aa17.07■□□□□ 0.32
SCARB2-216ENST00000639300 CCDC47Q96A33 483 aaKnown RBP17.07■□□□□ 0.32
SCARB2-216ENST00000639300 TPM2P07951 284 aa17.06■□□□□ 0.32
SCARB2-216ENST00000639300 NUP133Q8WUM0 1156 aa17.06■□□□□ 0.32
SCARB2-216ENST00000639300 UBE3BQ7Z3V4 1068 aa17.06■□□□□ 0.32
SCARB2-216ENST00000639300 ZBTB3Q9H5J0 574 aa17.06■□□□□ 0.32
SCARB2-216ENST00000639300 CHPF2Q9P2E5 772 aa17.06■□□□□ 0.32
SCARB2-216ENST00000639300 FILIP1Q7Z7B0 1213 aa17.06■□□□□ 0.32
SCARB2-216ENST00000639300 KIF21AQ7Z4S6 1674 aa17.06■□□□□ 0.32
SCARB2-216ENST00000639300 PPFIA3O75145 1194 aa17.06■□□□□ 0.32
SCARB2-216ENST00000639300 KRT28Q7Z3Y7 464 aa17.06■□□□□ 0.32
SCARB2-216ENST00000639300 MNS1Q8NEH6 495 aa17.06■□□□□ 0.32
SCARB2-216ENST00000639300 TNRQ92752 1358 aa17.06■□□□□ 0.32
SCARB2-216ENST00000639300 HYPKQ9NX55 129 aa17.06■□□□□ 0.32
SCARB2-216ENST00000639300 A0A0U1RQG5 324 aaPredicted RBP17.05■□□□□ 0.32
SCARB2-216ENST00000639300 TFIP11Q9UBB9 837 aaKnown RBP17.05■□□□□ 0.32
SCARB2-216ENST00000639300 GUCY1B3Q02153 619 aa17.05■□□□□ 0.32
SCARB2-216ENST00000639300 BRMS1Q9HCU9 246 aa17.05■□□□□ 0.32
SCARB2-216ENST00000639300 METTL24Q5JXM2 366 aa17.04■□□□□ 0.32
SCARB2-216ENST00000639300 ZSCAN30Q86W11 494 aa17.04■□□□□ 0.32
SCARB2-216ENST00000639300 TRIM34Q9BYJ4 488 aa17.04■□□□□ 0.32
SCARB2-216ENST00000639300 RBM27Q9P2N5 1060 aaKnown RBP17.04■□□□□ 0.32
SCARB2-216ENST00000639300 CTNNA3Q9UI47 895 aa17.04■□□□□ 0.32
SCARB2-216ENST00000639300 CFAP45Q9UL16 551 aa17.04■□□□□ 0.32
SCARB2-216ENST00000639300 EIF4G3O43432 1585 aaKnown RBP17.04■□□□□ 0.32
SCARB2-216ENST00000639300 IFIT1P09914 478 aaKnown RBP17.04■□□□□ 0.32
SCARB2-216ENST00000639300 NCBP3Q53F19 620 aaKnown RBP17.04■□□□□ 0.32
SCARB2-216ENST00000639300 BRPF1P55201 1214 aaPredicted RBP17.04■□□□□ 0.32
SCARB2-216ENST00000639300 SLC39A6Q13433 755 aa17.04■□□□□ 0.32
SCARB2-216ENST00000639300 TTLL5Q6EMB2 1281 aa17.04■□□□□ 0.32
SCARB2-216ENST00000639300 TMX3Q96JJ7 454 aa17.04■□□□□ 0.32
SCARB2-216ENST00000639300 TCEANC2Q96MN5 208 aa17.04■□□□□ 0.32
SCARB2-216ENST00000639300 UHRF1BP1LA0JNW5 1464 aa17.03■□□□□ 0.32
SCARB2-216ENST00000639300 ANKRD24Q8TF21 1146 aa17.03■□□□□ 0.32
SCARB2-216ENST00000639300 NACAP1Q9BZK3 213 aa17.03■□□□□ 0.32
SCARB2-216ENST00000639300 DCTPP1Q9H773 170 aa17.03■□□□□ 0.32
SCARB2-216ENST00000639300 TRIM35Q9UPQ4 493 aa17.03■□□□□ 0.32
SCARB2-216ENST00000639300 RIMS2Q9UQ26 1411 aa17.03■□□□□ 0.32
SCARB2-216ENST00000639300 SNRKQ9NRH2 765 aa17.03■□□□□ 0.32
SCARB2-216ENST00000639300 ABCF2Q9UG63 623 aa17.03■□□□□ 0.32
SCARB2-216ENST00000639300 SAMD9Q5K651 1589 aa17.03■□□□□ 0.32
SCARB2-216ENST00000639300 TRIM22Q8IYM9 498 aa17.03■□□□□ 0.32
SCARB2-216ENST00000639300 JMYQ8N9B5 988 aa17.03■□□□□ 0.32
SCARB2-216ENST00000639300 ZNF771Q7L3S4 317 aaPredicted RBP17.03■□□□□ 0.32
SCARB2-216ENST00000639300 EYA1Q99502 592 aa17.03■□□□□ 0.32
SCARB2-216ENST00000639300 PIK3R4Q99570 1358 aa17.02■□□□□ 0.32
SCARB2-216ENST00000639300 ABCC10Q5T3U5 1492 aa17.02■□□□□ 0.32
SCARB2-216ENST00000639300 MAP3K11Q16584 847 aa17.02■□□□□ 0.32
SCARB2-216ENST00000639300 LRRC59Q96AG4 307 aaKnown RBP17.02■□□□□ 0.32
SCARB2-216ENST00000639300 PANK2Q9BZ23 570 aa17.02■□□□□ 0.32
SCARB2-216ENST00000639300 ZBTB7BO15156 539 aaPredicted RBP17.02■□□□□ 0.31
SCARB2-216ENST00000639300 TDO2P48775 406 aa17.02■□□□□ 0.31
SCARB2-216ENST00000639300 U3KPZ7 1027 aaPredicted RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms