RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 NF2P35240 595 aa7.41□□□□□ -1.22
GABRB3-218ENST00000635994 HMGN5P82970 282 aaKnown RBP7.41□□□□□ -1.22
GABRB3-218ENST00000635994 ARID3AQ99856 593 aa7.41□□□□□ -1.22
GABRB3-218ENST00000635994 TSPYL1Q9H0U9 437 aa7.41□□□□□ -1.22
GABRB3-218ENST00000635994 ZCCHC11Q5TAX3 1644 aaKnown RBP7.41□□□□□ -1.22
GABRB3-218ENST00000635994 SSBP05455 408 aaKnown RBP eCLIP7.41□□□□□ -1.22
GABRB3-218ENST00000635994 PIBF1Q8WXW3 757 aa7.41□□□□□ -1.22
GABRB3-218ENST00000635994 ZNF428Q96B54 188 aa7.41□□□□□ -1.22
GABRB3-218ENST00000635994 TEX13AQ9BXU3 409 aaPredicted RBP7.41□□□□□ -1.22
GABRB3-218ENST00000635994 SYCP2Q9BX26 1530 aa7.41□□□□□ -1.22
GABRB3-218ENST00000635994 KIAA1107Q9UPP5 1409 aa7.4□□□□□ -1.22
GABRB3-218ENST00000635994 EIF3JO75822 258 aaKnown RBP7.4□□□□□ -1.22
GABRB3-218ENST00000635994 RPGRQ92834 1020 aaKnown RBP7.4□□□□□ -1.22
GABRB3-218ENST00000635994 PTPN23Q9H3S7 1636 aa7.4□□□□□ -1.22
GABRB3-218ENST00000635994 GOLGA6L10A0A0M3HER8 536 aa7.4□□□□□ -1.22
GABRB3-218ENST00000635994 TMEM266Q2M3C6 531 aa7.4□□□□□ -1.22
GABRB3-218ENST00000635994 AXDND1Q5T1B0 1012 aaPredicted RBP7.4□□□□□ -1.22
GABRB3-218ENST00000635994 CEP57L1Q8IYX8 460 aa7.4□□□□□ -1.22
GABRB3-218ENST00000635994 CCDC12Q8WUD4 166 aaPredicted RBP7.4□□□□□ -1.22
GABRB3-218ENST00000635994 DDX12PQ92771 950 aa7.4□□□□□ -1.22
GABRB3-218ENST00000635994 ZBED9Q6R2W3 1325 aa7.4□□□□□ -1.22
GABRB3-218ENST00000635994 KIAA0754O94854 1291 aa7.4□□□□□ -1.23
GABRB3-218ENST00000635994 POLR3DP05423 398 aaPredicted RBP7.4□□□□□ -1.23
GABRB3-218ENST00000635994 HMOX1P09601 288 aa7.4□□□□□ -1.23
GABRB3-218ENST00000635994 SLC26A8Q96RN1 970 aa7.4□□□□□ -1.23
GABRB3-218ENST00000635994 TRIM5Q9C035 493 aa7.4□□□□□ -1.23
GABRB3-218ENST00000635994 CABP5Q9NP86 173 aa7.4□□□□□ -1.23
GABRB3-218ENST00000635994 MSH6P52701 1360 aa7.4□□□□□ -1.23
GABRB3-218ENST00000635994 LMTK3Q96Q04 1460 aa7.4□□□□□ -1.23
GABRB3-218ENST00000635994 WDR78Q5VTH9 848 aa7.4□□□□□ -1.23
GABRB3-218ENST00000635994 HOOK3Q86VS8 718 aa7.4□□□□□ -1.23
GABRB3-218ENST00000635994 BAG4O95429 457 aaKnown RBP7.39□□□□□ -1.23
GABRB3-218ENST00000635994 USP5P45974 858 aa7.39□□□□□ -1.23
GABRB3-218ENST00000635994 FOSBP53539 338 aa7.39□□□□□ -1.23
GABRB3-218ENST00000635994 IMMTQ16891 758 aaKnown RBP7.39□□□□□ -1.23
GABRB3-218ENST00000635994 LEKR1Q6ZMV7 388 aa7.39□□□□□ -1.23
GABRB3-218ENST00000635994 NUP133Q8WUM0 1156 aa7.39□□□□□ -1.23
GABRB3-218ENST00000635994 RNF41Q9H4P4 317 aaPredicted RBP7.39□□□□□ -1.23
GABRB3-218ENST00000635994 CFAP45Q9UL16 551 aa7.39□□□□□ -1.23
GABRB3-218ENST00000635994 HFM1A2PYH4 1435 aa7.39□□□□□ -1.23
GABRB3-218ENST00000635994 ERBINQ96RT1 1412 aa7.39□□□□□ -1.23
GABRB3-218ENST00000635994 HMGB1P1B2RPK0 211 aaPredicted RBP7.39□□□□□ -1.23
GABRB3-218ENST00000635994 SERPINC1P01008 464 aa7.39□□□□□ -1.23
GABRB3-218ENST00000635994 HSPA2P54652 639 aa7.39□□□□□ -1.23
GABRB3-218ENST00000635994 USP37Q86T82 979 aa7.39□□□□□ -1.23
GABRB3-218ENST00000635994 LRRCC1Q9C099 1032 aa7.39□□□□□ -1.23
GABRB3-218ENST00000635994 COMMD10Q9Y6G5 202 aa7.39□□□□□ -1.23
GABRB3-218ENST00000635994 NUTM2GQ5VZR2 741 aa7.39□□□□□ -1.23
GABRB3-218ENST00000635994 AIDAQ96BJ3 306 aa7.39□□□□□ -1.23
GABRB3-218ENST00000635994 TMOD3Q9NYL9 352 aa7.39□□□□□ -1.23
GABRB3-218ENST00000635994 DUOX2Q9NRD8 1548 aa7.39□□□□□ -1.23
GABRB3-218ENST00000635994 KDM5BQ9UGL1 1544 aa7.39□□□□□ -1.23
GABRB3-218ENST00000635994 LRSAM1Q6UWE0 723 aa7.39□□□□□ -1.23
GABRB3-218ENST00000635994 PYM1Q9BRP8 204 aaKnown RBP7.39□□□□□ -1.23
GABRB3-218ENST00000635994 SMTNL1A8MU46 457 aa7.38□□□□□ -1.23
GABRB3-218ENST00000635994 PDE4AP27815 886 aa7.38□□□□□ -1.23
GABRB3-218ENST00000635994 LRRC27Q9C0I9 530 aa7.38□□□□□ -1.23
GABRB3-218ENST00000635994 GGNBP2Q9H3C7 697 aa7.38□□□□□ -1.23
GABRB3-218ENST00000635994 HDAC9Q9UKV0 1011 aa7.38□□□□□ -1.23
GABRB3-218ENST00000635994 ATAD2Q6PL18 1390 aa7.38□□□□□ -1.23
GABRB3-218ENST00000635994 GPATCH8Q9UKJ3 1502 aaKnown RBP7.38□□□□□ -1.23
GABRB3-218ENST00000635994 SSR1P43307 286 aaKnown RBP7.38□□□□□ -1.23
GABRB3-218ENST00000635994 BRPF1P55201 1214 aaPredicted RBP7.38□□□□□ -1.23
GABRB3-218ENST00000635994 SPTY2D1Q68D10 685 aaPredicted RBP7.38□□□□□ -1.23
GABRB3-218ENST00000635994 C22orf23Q9BZE7 217 aa7.38□□□□□ -1.23
GABRB3-218ENST00000635994 MKNK2Q9HBH9 465 aa7.38□□□□□ -1.23
GABRB3-218ENST00000635994 MAP3K1Q13233 1512 aa7.38□□□□□ -1.23
GABRB3-218ENST00000635994 CCDC66A2RUB6 948 aa7.38□□□□□ -1.23
GABRB3-218ENST00000635994 HLA-DOAP06340 250 aa7.38□□□□□ -1.23
GABRB3-218ENST00000635994 USP8P40818 1118 aa7.38□□□□□ -1.23
GABRB3-218ENST00000635994 KRT85P78386 507 aa7.38□□□□□ -1.23
GABRB3-218ENST00000635994 AMOTQ4VCS5 1084 aa7.38□□□□□ -1.23
GABRB3-218ENST00000635994 FBXO31Q5XUX0 539 aaPredicted RBP7.38□□□□□ -1.23
GABRB3-218ENST00000635994 DZIP1Q86YF9 867 aaKnown RBP7.38□□□□□ -1.23
GABRB3-218ENST00000635994 TWISTNBQ3B726 338 aaPredicted RBP7.38□□□□□ -1.23
GABRB3-218ENST00000635994 CCDC178Q5BJE1 867 aa7.38□□□□□ -1.23
GABRB3-218ENST00000635994 CTCFLQ8NI51 663 aaPredicted RBP7.38□□□□□ -1.23
GABRB3-218ENST00000635994 TSNARE1Q96NA8 513 aa7.38□□□□□ -1.23
GABRB3-218ENST00000635994 NBPF8Q3BBV2 869 aa7.37□□□□□ -1.23
GABRB3-218ENST00000635994 FKBP15Q5T1M5 1219 aa7.37□□□□□ -1.23
GABRB3-218ENST00000635994 NBPF14Q5TI25 921 aa7.37□□□□□ -1.23
GABRB3-218ENST00000635994 ZNF444Q8N0Y2 327 aaPredicted RBP7.37□□□□□ -1.23
GABRB3-218ENST00000635994 NCKAP5LQ9HCH0 1330 aa7.37□□□□□ -1.23
GABRB3-218ENST00000635994 SLU7O95391 586 aaKnown RBP7.37□□□□□ -1.23
GABRB3-218ENST00000635994 CCDC192P0DO97 292 aa7.37□□□□□ -1.23
GABRB3-218ENST00000635994 FERP16591 822 aa7.37□□□□□ -1.23
GABRB3-218ENST00000635994 LNPKQ9C0E8 428 aa7.37□□□□□ -1.23
GABRB3-218ENST00000635994 GBP3Q9H0R5 595 aa7.37□□□□□ -1.23
GABRB3-218ENST00000635994 EIF5P55010 431 aaKnown RBP7.37□□□□□ -1.23
GABRB3-218ENST00000635994 MAP3K12Q12852 859 aa7.37□□□□□ -1.23
GABRB3-218ENST00000635994 IQCA1Q86XH1 822 aa7.37□□□□□ -1.23
GABRB3-218ENST00000635994 CRBNQ96SW2 442 aa7.37□□□□□ -1.23
GABRB3-218ENST00000635994 UTP14AQ9BVJ6 771 aaKnown RBP7.37□□□□□ -1.23
GABRB3-218ENST00000635994 WDR33Q9C0J8 1336 aaKnown RBP7.37□□□□□ -1.23
GABRB3-218ENST00000635994 SLC5A1P13866 664 aa7.37□□□□□ -1.23
GABRB3-218ENST00000635994 POLD1P28340 1107 aa7.37□□□□□ -1.23
GABRB3-218ENST00000635994 TTLL5Q6EMB2 1281 aa7.37□□□□□ -1.23
GABRB3-218ENST00000635994 BLOC1S2Q6QNY1 142 aa7.37□□□□□ -1.23
GABRB3-218ENST00000635994 APBB1IPQ7Z5R6 666 aaPredicted RBP7.37□□□□□ -1.23
GABRB3-218ENST00000635994 NGLY1Q96IV0 654 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms