RNA–Protein interactions for RNA: ENST00000635832.1

GABRB3-217, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-217ENST00000635832 ARHGAP29Q52LW3 1261 aa11.31□□□□□ -0.6
GABRB3-217ENST00000635832 RPAP2Q8IXW5 612 aaPredicted RBP11.31□□□□□ -0.6
GABRB3-217ENST00000635832 PIBF1Q8WXW3 757 aa11.31□□□□□ -0.6
GABRB3-217ENST00000635832 DMRT2Q9Y5R5 561 aa11.31□□□□□ -0.6
GABRB3-217ENST00000635832 AMOTQ4VCS5 1084 aa11.31□□□□□ -0.6
GABRB3-217ENST00000635832 NAPBQ9H115 298 aa11.31□□□□□ -0.6
GABRB3-217ENST00000635832 PRDM2Q13029 1718 aa11.31□□□□□ -0.6
GABRB3-217ENST00000635832 GOLGA6L10A0A0M3HER8 536 aa11.31□□□□□ -0.6
GABRB3-217ENST00000635832 SPC24Q8NBT2 197 aa11.31□□□□□ -0.6
GABRB3-217ENST00000635832 CABP5Q9NP86 173 aa11.31□□□□□ -0.6
GABRB3-217ENST00000635832 CCDC12Q8WUD4 166 aaPredicted RBP11.3□□□□□ -0.6
GABRB3-217ENST00000635832 GBP3Q9H0R5 595 aa11.3□□□□□ -0.6
GABRB3-217ENST00000635832 MYO1BO43795 1136 aa11.3□□□□□ -0.6
GABRB3-217ENST00000635832 USP8P40818 1118 aa11.3□□□□□ -0.6
GABRB3-217ENST00000635832 ZC3H6P61129 1189 aaKnown RBP11.3□□□□□ -0.6
GABRB3-217ENST00000635832 NUP62CLQ9H1M0 184 aa11.3□□□□□ -0.6
GABRB3-217ENST00000635832 CACNA2D4Q7Z3S7 1137 aa11.3□□□□□ -0.6
GABRB3-217ENST00000635832 MINDY4BA8MYZ0 360 aa11.3□□□□□ -0.6
GABRB3-217ENST00000635832 RAB11FIP3O75154 756 aa11.3□□□□□ -0.6
GABRB3-217ENST00000635832 LRRC45Q96CN5 670 aa11.3□□□□□ -0.6
GABRB3-217ENST00000635832 MAP4K4O95819 1239 aaPredicted RBP11.3□□□□□ -0.6
GABRB3-217ENST00000635832 PPM1EQ8WY54 764 aa11.3□□□□□ -0.6
GABRB3-217ENST00000635832 SSX2IPQ9Y2D8 614 aa11.3□□□□□ -0.6
GABRB3-217ENST00000635832 SPINK5Q9NQ38 1064 aaPredicted RBP11.29□□□□□ -0.6
GABRB3-217ENST00000635832 ANKRD30BQ9BXX2 1392 aa11.29□□□□□ -0.6
GABRB3-217ENST00000635832 K7ELQ4 463 aaPredicted RBP11.29□□□□□ -0.6
GABRB3-217ENST00000635832 IFIT5Q13325 482 aaKnown RBP11.29□□□□□ -0.6
GABRB3-217ENST00000635832 NGLY1Q96IV0 654 aa11.29□□□□□ -0.6
GABRB3-217ENST00000635832 UBA5Q9GZZ9 404 aa11.29□□□□□ -0.6
GABRB3-217ENST00000635832 TRAF1Q13077 416 aa11.29□□□□□ -0.6
GABRB3-217ENST00000635832 LRPPRCP42704 1394 aaKnown RBP11.29□□□□□ -0.6
GABRB3-217ENST00000635832 ZNF644Q9H582 1327 aaPredicted RBP11.29□□□□□ -0.6
GABRB3-217ENST00000635832 FCHSD2O94868 740 aa11.29□□□□□ -0.6
GABRB3-217ENST00000635832 CWC27Q6UX04 472 aaKnown RBP11.29□□□□□ -0.6
GABRB3-217ENST00000635832 GSTTP1A0A1W2PQM5 241 aa11.28□□□□□ -0.6
GABRB3-217ENST00000635832 CTNNA2P26232 953 aa11.28□□□□□ -0.6
GABRB3-217ENST00000635832 NF2P35240 595 aa11.28□□□□□ -0.6
GABRB3-217ENST00000635832 DYDC1Q8WWB3 177 aa11.28□□□□□ -0.6
GABRB3-217ENST00000635832 KIF1BPQ96EK5 621 aa11.28□□□□□ -0.6
GABRB3-217ENST00000635832 A0A087WZG4 1122 aa11.28□□□□□ -0.6
GABRB3-217ENST00000635832 HLA-DOAP06340 250 aa11.28□□□□□ -0.6
GABRB3-217ENST00000635832 HMGB1P09429 215 aaKnown RBP11.28□□□□□ -0.6
GABRB3-217ENST00000635832 GIGYF2Q6Y7W6 1299 aaKnown RBP11.28□□□□□ -0.6
GABRB3-217ENST00000635832 TEX13AQ9BXU3 409 aaPredicted RBP11.28□□□□□ -0.6
GABRB3-217ENST00000635832 ANKRD18BA2A2Z9 1011 aa11.28□□□□□ -0.6
GABRB3-217ENST00000635832 MAP2K1Q02750 393 aaPredicted RBP11.28□□□□□ -0.6
GABRB3-217ENST00000635832 CCDC85AQ96PX6 553 aaPredicted RBP11.28□□□□□ -0.6
GABRB3-217ENST00000635832 CCDC194A0A1B0GVG4 234 aa11.28□□□□□ -0.6
GABRB3-217ENST00000635832 GCOM1H8Y6P7 765 aaPredicted RBP11.27□□□□□ -0.6
GABRB3-217ENST00000635832 GLRX3O76003 335 aaKnown RBP11.27□□□□□ -0.6
GABRB3-217ENST00000635832 MYZAPP0CAP1 466 aa11.27□□□□□ -0.6
GABRB3-217ENST00000635832 TSR2Q969E8 191 aaKnown RBP11.27□□□□□ -0.6
GABRB3-217ENST00000635832 PPP4R3BQ5MIZ7 849 aa11.27□□□□□ -0.6
GABRB3-217ENST00000635832 SPTY2D1Q68D10 685 aaPredicted RBP11.27□□□□□ -0.6
GABRB3-217ENST00000635832 FAM177A1Q8N128 213 aaPredicted RBP11.27□□□□□ -0.6
GABRB3-217ENST00000635832 C6orf229H3BNL8 230 aa11.27□□□□□ -0.61
GABRB3-217ENST00000635832 MCM3P25205 808 aa11.27□□□□□ -0.61
GABRB3-217ENST00000635832 FAM193AP78312 1265 aa11.27□□□□□ -0.61
GABRB3-217ENST00000635832 TAOK3Q9H2K8 898 aa11.27□□□□□ -0.61
GABRB3-217ENST00000635832 TRMT112Q9UI30 125 aaKnown RBP11.27□□□□□ -0.61
GABRB3-217ENST00000635832 FGD5Q6ZNL6 1462 aa11.27□□□□□ -0.61
GABRB3-217ENST00000635832 EXOC5O00471 708 aa11.27□□□□□ -0.61
GABRB3-217ENST00000635832 BAG3O95817 575 aa11.27□□□□□ -0.61
GABRB3-217ENST00000635832 CFAP100Q494V2 611 aa11.27□□□□□ -0.61
GABRB3-217ENST00000635832 CDC5LQ99459 802 aaKnown RBP11.27□□□□□ -0.61
GABRB3-217ENST00000635832 SLC12A5Q9H2X9 1139 aa11.27□□□□□ -0.61
GABRB3-217ENST00000635832 KIF2AO00139 706 aaPredicted RBP11.26□□□□□ -0.61
GABRB3-217ENST00000635832 AMPD3Q01432 767 aa11.26□□□□□ -0.61
GABRB3-217ENST00000635832 CHD1LQ86WJ1 897 aa11.26□□□□□ -0.61
GABRB3-217ENST00000635832 TSNARE1Q96NA8 513 aa11.26□□□□□ -0.61
GABRB3-217ENST00000635832 RANBP6O60518 1105 aaKnown RBP11.26□□□□□ -0.61
GABRB3-217ENST00000635832 PTCD1O75127 700 aaKnown RBP11.26□□□□□ -0.61
GABRB3-217ENST00000635832 LRRC27Q9C0I9 530 aa11.26□□□□□ -0.61
GABRB3-217ENST00000635832 CATIPQ7Z7H3 387 aa11.26□□□□□ -0.61
GABRB3-217ENST00000635832 PYM1Q9BRP8 204 aaKnown RBP11.26□□□□□ -0.61
GABRB3-217ENST00000635832 SLC12A7Q9Y666 1083 aa11.26□□□□□ -0.61
GABRB3-217ENST00000635832 PRG4Q92954 1404 aaPredicted RBP11.26□□□□□ -0.61
GABRB3-217ENST00000635832 USO1O60763 962 aaKnown RBP11.26□□□□□ -0.61
GABRB3-217ENST00000635832 BCAR3O75815 825 aa11.26□□□□□ -0.61
GABRB3-217ENST00000635832 KIF5BP33176 963 aa11.26□□□□□ -0.61
GABRB3-217ENST00000635832 XPCQ01831 940 aaPredicted RBP11.26□□□□□ -0.61
GABRB3-217ENST00000635832 MVPQ14764 893 aaKnown RBP11.26□□□□□ -0.61
GABRB3-217ENST00000635832 MAP9Q49MG5 647 aa11.26□□□□□ -0.61
GABRB3-217ENST00000635832 CTNNBL1Q8WYA6 563 aaPredicted RBP11.26□□□□□ -0.61
GABRB3-217ENST00000635832 CRACR2AQ9BSW2 395 aa11.26□□□□□ -0.61
GABRB3-217ENST00000635832 ZSCAN12O43309 604 aa11.25□□□□□ -0.61
GABRB3-217ENST00000635832 SMC1AQ14683 1233 aaKnown RBP11.25□□□□□ -0.61
GABRB3-217ENST00000635832 NFE2L2Q16236 605 aa11.25□□□□□ -0.61
GABRB3-217ENST00000635832 CCDC61Q9Y6R9 512 aa11.25□□□□□ -0.61
GABRB3-217ENST00000635832 GRIN2BQ13224 1484 aa11.25□□□□□ -0.61
GABRB3-217ENST00000635832 FERP16591 822 aa11.25□□□□□ -0.61
GABRB3-217ENST00000635832 DDX46Q7L014 1031 aaKnown RBP11.25□□□□□ -0.61
GABRB3-217ENST00000635832 CALML4Q96GE6 196 aa11.25□□□□□ -0.61
GABRB3-217ENST00000635832 ADAMTS2O95450 1211 aa11.25□□□□□ -0.61
GABRB3-217ENST00000635832 TAF3Q5VWG9 929 aa11.25□□□□□ -0.61
GABRB3-217ENST00000635832 LUZP1Q86V48 1076 aa11.25□□□□□ -0.61
GABRB3-217ENST00000635832 NLRP5P59047 1200 aa11.25□□□□□ -0.61
GABRB3-217ENST00000635832 ST5P78524 1137 aa11.25□□□□□ -0.61
GABRB3-217ENST00000635832 TTF1Q15361 905 aaPredicted RBP11.25□□□□□ -0.61
GABRB3-217ENST00000635832 CCDC102AQ96A19 550 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms