RNA–Protein interactions for RNA: ENST00000635252.1

PRDM9-203, Transcript of PR/SET domain 9, humanhuman

TSL 5

Gene PRDM9, Length 1,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-203ENST00000635252 RTF1Q92541 710 aaKnown RBP17.77■□□□□ 0.44
PRDM9-203ENST00000635252 SLC52A2Q9HAB3 445 aa17.77■□□□□ 0.44
PRDM9-203ENST00000635252 ASAP1Q9ULH1 1129 aa17.77■□□□□ 0.44
PRDM9-203ENST00000635252 CEMIPQ8WUJ3 1361 aa17.77■□□□□ 0.44
PRDM9-203ENST00000635252 PROM2Q8N271 834 aa17.77■□□□□ 0.43
PRDM9-203ENST00000635252 MRC1P22897 1456 aa17.76■□□□□ 0.43
PRDM9-203ENST00000635252 KCNQ4P56696 695 aa17.76■□□□□ 0.43
PRDM9-203ENST00000635252 TRIM35Q9UPQ4 493 aa17.76■□□□□ 0.43
PRDM9-203ENST00000635252 PLSCR1O15162 318 aa17.75■□□□□ 0.43
PRDM9-203ENST00000635252 HTATSF1O43719 755 aaKnown RBP17.75■□□□□ 0.43
PRDM9-203ENST00000635252 ATG3Q9NT62 314 aa17.75■□□□□ 0.43
PRDM9-203ENST00000635252 TEFQ10587 303 aa17.74■□□□□ 0.43
PRDM9-203ENST00000635252 SIPA1L3O60292 1781 aaPredicted RBP17.73■□□□□ 0.43
PRDM9-203ENST00000635252 SLC39A6Q13433 755 aa17.73■□□□□ 0.43
PRDM9-203ENST00000635252 PALLDQ8WX93 1383 aa17.73■□□□□ 0.43
PRDM9-203ENST00000635252 TXNRD1Q16881 649 aa17.72■□□□□ 0.43
PRDM9-203ENST00000635252 MIS18AQ9NYP9 233 aa17.72■□□□□ 0.43
PRDM9-203ENST00000635252 LRRC4BQ9NT99 713 aa17.72■□□□□ 0.43
PRDM9-203ENST00000635252 SALL2Q9Y467 1007 aaPredicted RBP17.72■□□□□ 0.43
PRDM9-203ENST00000635252 LY75O60449 1722 aa17.7■□□□□ 0.42
PRDM9-203ENST00000635252 RGPD3A6NKT7 1758 aaPredicted RBP17.7■□□□□ 0.42
PRDM9-203ENST00000635252 RGPD4Q7Z3J3 1758 aa17.7■□□□□ 0.42
PRDM9-203ENST00000635252 KCNQ3O43525 872 aa17.7■□□□□ 0.42
PRDM9-203ENST00000635252 PTCD1O75127 700 aaKnown RBP17.7■□□□□ 0.42
PRDM9-203ENST00000635252 SMARCC1Q92922 1105 aaPredicted RBP17.7■□□□□ 0.42
PRDM9-203ENST00000635252 RREB1Q92766 1687 aa17.69■□□□□ 0.42
PRDM9-203ENST00000635252 PAPPAQ13219 1627 aa17.69■□□□□ 0.42
PRDM9-203ENST00000635252 LMOD3Q0VAK6 560 aa17.69■□□□□ 0.42
PRDM9-203ENST00000635252 SLC4A9Q96Q91 983 aa17.69■□□□□ 0.42
PRDM9-203ENST00000635252 RBM42Q9BTD8 480 aaKnown RBP17.69■□□□□ 0.42
PRDM9-203ENST00000635252 CCNL1Q9UK58 526 aaPredicted RBP17.69■□□□□ 0.42
PRDM9-203ENST00000635252 BTBD11A6QL63 1104 aa17.68■□□□□ 0.42
PRDM9-203ENST00000635252 TAF7Q15545 349 aaPredicted RBP17.68■□□□□ 0.42
PRDM9-203ENST00000635252 NUP188Q5SRE5 1749 aa17.68■□□□□ 0.42
PRDM9-203ENST00000635252 LOC102724428A0A0B4J2F2 783 aa17.67■□□□□ 0.42
PRDM9-203ENST00000635252 SIK1P57059 783 aa17.67■□□□□ 0.42
PRDM9-203ENST00000635252 ITPK1Q13572 414 aa17.66■□□□□ 0.42
PRDM9-203ENST00000635252 ZNF790Q6PG37 636 aa17.66■□□□□ 0.42
PRDM9-203ENST00000635252 WWC1Q8IX03 1113 aa17.66■□□□□ 0.42
PRDM9-203ENST00000635252 KCPQ6ZWJ8 1503 aa17.66■□□□□ 0.42
PRDM9-203ENST00000635252 ATP6V1AP38606 617 aa17.65■□□□□ 0.42
PRDM9-203ENST00000635252 SLC27A3Q5K4L6 730 aa17.65■□□□□ 0.42
PRDM9-203ENST00000635252 ZNF496Q96IT1 587 aaPredicted RBP17.65■□□□□ 0.42
PRDM9-203ENST00000635252 ANO8Q9HCE9 1232 aaPredicted RBP17.65■□□□□ 0.42
PRDM9-203ENST00000635252 LAS1LQ9Y4W2 734 aaKnown RBP17.65■□□□□ 0.42
PRDM9-203ENST00000635252 UBR2Q8IWV8 1755 aa17.64■□□□□ 0.42
PRDM9-203ENST00000635252 TTC5Q8N0Z6 440 aa17.64■□□□□ 0.41
PRDM9-203ENST00000635252 KDM3BQ7LBC6 1761 aa17.63■□□□□ 0.41
PRDM9-203ENST00000635252 CCDC27Q2M243 656 aa17.62■□□□□ 0.41
PRDM9-203ENST00000635252 LINC00116Q8NCU8 138 aa17.62■□□□□ 0.41
PRDM9-203ENST00000635252 TAF1LQ8IZX4 1826 aa17.62■□□□□ 0.41
PRDM9-203ENST00000635252 ZNF827Q17R98 1081 aa17.62■□□□□ 0.41
PRDM9-203ENST00000635252 TSPYL4Q9UJ04 414 aa17.62■□□□□ 0.41
PRDM9-203ENST00000635252 C5P01031 1676 aa17.62■□□□□ 0.41
PRDM9-203ENST00000635252 PRAMEF22A3QJZ6 481 aa17.61■□□□□ 0.41
PRDM9-203ENST00000635252 CHL1O00533 1208 aa17.61■□□□□ 0.41
PRDM9-203ENST00000635252 DNAJC10Q8IXB1 793 aa17.61■□□□□ 0.41
PRDM9-203ENST00000635252 TJP1Q07157 1748 aa17.61■□□□□ 0.41
PRDM9-203ENST00000635252 PSDA5PKW4 1024 aaPredicted RBP17.59■□□□□ 0.41
PRDM9-203ENST00000635252 ZNF853P0CG23 659 aa17.59■□□□□ 0.41
PRDM9-203ENST00000635252 NCBP3Q53F19 620 aaKnown RBP17.59■□□□□ 0.41
PRDM9-203ENST00000635252 SMIM5Q71RC9 77 aa17.59■□□□□ 0.41
PRDM9-203ENST00000635252 AKT1S1Q96B36 256 aa17.59■□□□□ 0.41
PRDM9-203ENST00000635252 CFAP44Q96MT7 982 aa17.59■□□□□ 0.41
PRDM9-203ENST00000635252 FMNL2Q96PY5 1086 aa17.59■□□□□ 0.41
PRDM9-203ENST00000635252 HEG1Q9ULI3 1381 aa17.59■□□□□ 0.41
PRDM9-203ENST00000635252 ZNF831Q5JPB2 1677 aa17.58■□□□□ 0.41
PRDM9-203ENST00000635252 EIF4A1P60842 406 aaKnown RBP17.58■□□□□ 0.41
PRDM9-203ENST00000635252 R3HDM1Q15032 1099 aaKnown RBP17.58■□□□□ 0.41
PRDM9-203ENST00000635252 KRT24Q2M2I5 525 aa17.58■□□□□ 0.41
PRDM9-203ENST00000635252 SPINK5Q9NQ38 1064 aaPredicted RBP17.58■□□□□ 0.41
PRDM9-203ENST00000635252 MBIPQ9NS73 344 aa17.58■□□□□ 0.41
PRDM9-203ENST00000635252 C4BP0C0L5 1744 aa17.57■□□□□ 0.4
PRDM9-203ENST00000635252 COL5A3P25940 1745 aaPredicted RBP17.57■□□□□ 0.4
PRDM9-203ENST00000635252 SLC15A2Q16348 729 aa17.57■□□□□ 0.4
PRDM9-203ENST00000635252 AMIGO3Q86WK7 504 aa17.57■□□□□ 0.4
PRDM9-203ENST00000635252 IFT57Q9NWB7 429 aa17.57■□□□□ 0.4
PRDM9-203ENST00000635252 STK32BQ9NY57 414 aa17.57■□□□□ 0.4
PRDM9-203ENST00000635252 MYH14Q7Z406 1995 aaKnown RBP17.57■□□□□ 0.4
PRDM9-203ENST00000635252 ZNF521Q96K83 1311 aa17.57■□□□□ 0.4
PRDM9-203ENST00000635252 CALD1Q05682 793 aaKnown RBP17.57■□□□□ 0.4
PRDM9-203ENST00000635252 NBPF14Q5TI25 921 aa17.57■□□□□ 0.4
PRDM9-203ENST00000635252 VSIG10Q8N0Z9 540 aa17.57■□□□□ 0.4
PRDM9-203ENST00000635252 TSR2Q969E8 191 aaKnown RBP17.57■□□□□ 0.4
PRDM9-203ENST00000635252 BABAM1Q9NWV8 329 aa17.57■□□□□ 0.4
PRDM9-203ENST00000635252 CYP19A1P11511 503 aaPredicted RBP17.56■□□□□ 0.4
PRDM9-203ENST00000635252 GNAI1P63096 354 aa17.56■□□□□ 0.4
PRDM9-203ENST00000635252 PDGFDQ9GZP0 370 aaPredicted RBP17.56■□□□□ 0.4
PRDM9-203ENST00000635252 CRKLP46109 303 aaKnown RBP17.55■□□□□ 0.4
PRDM9-203ENST00000635252 WDR63Q8IWG1 891 aa17.55■□□□□ 0.4
PRDM9-203ENST00000635252 NGEFQ8N5V2 710 aa17.55■□□□□ 0.4
PRDM9-203ENST00000635252 USP16Q9Y5T5 823 aa17.55■□□□□ 0.4
PRDM9-203ENST00000635252 CICQ96RK0 1608 aaPredicted RBP17.55■□□□□ 0.4
PRDM9-203ENST00000635252 TUBGCP6Q96RT7 1819 aa17.55■□□□□ 0.4
PRDM9-203ENST00000635252 GIGYF1O75420 1035 aaPredicted RBP17.54■□□□□ 0.4
PRDM9-203ENST00000635252 SNRPA1P09661 255 aaKnown RBP17.54■□□□□ 0.4
PRDM9-203ENST00000635252 HNRNPUQ00839 825 aaKnown RBP eCLIP17.54■□□□□ 0.4
PRDM9-203ENST00000635252 INTS5Q6P9B9 1019 aaKnown RBP17.54■□□□□ 0.4
PRDM9-203ENST00000635252 TFCP2L1Q9NZI6 479 aa17.54■□□□□ 0.4
PRDM9-203ENST00000635252 IL16Q14005 1332 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms