RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 ANAPC15P60006 121 aa13.75□□□□□ -0.21
SHPRH-211ENST00000629427 ZNF444Q8N0Y2 327 aaPredicted RBP13.75□□□□□ -0.21
SHPRH-211ENST00000629427 KIAA1107Q9UPP5 1409 aa13.74□□□□□ -0.21
SHPRH-211ENST00000629427 EPB41L2O43491 1005 aaKnown RBP13.74□□□□□ -0.21
SHPRH-211ENST00000629427 UPF3BQ9BZI7 483 aaKnown RBP13.74□□□□□ -0.21
SHPRH-211ENST00000629427 NAPBQ9H115 298 aa13.74□□□□□ -0.21
SHPRH-211ENST00000629427 NUP62CLQ9H1M0 184 aa13.74□□□□□ -0.21
SHPRH-211ENST00000629427 ZSCAN31Q96LW9 406 aaPredicted RBP13.74□□□□□ -0.21
SHPRH-211ENST00000629427 UBA5Q9GZZ9 404 aa13.74□□□□□ -0.21
SHPRH-211ENST00000629427 SMTNL1A8MU46 457 aa13.74□□□□□ -0.21
SHPRH-211ENST00000629427 EXOC6BQ9Y2D4 811 aa13.73□□□□□ -0.21
SHPRH-211ENST00000629427 DUSP27Q5VZP5 1158 aa13.73□□□□□ -0.21
SHPRH-211ENST00000629427 CCDC112Q8NEF3 446 aa13.73□□□□□ -0.21
SHPRH-211ENST00000629427 BOLA2Q9H3K6 86 aa13.73□□□□□ -0.21
SHPRH-211ENST00000629427 ATAD2Q6PL18 1390 aa13.73□□□□□ -0.21
SHPRH-211ENST00000629427 MCM10Q7L590 875 aa13.73□□□□□ -0.21
SHPRH-211ENST00000629427 NFE2L2Q16236 605 aa13.73□□□□□ -0.21
SHPRH-211ENST00000629427 TAF3Q5VWG9 929 aa13.73□□□□□ -0.21
SHPRH-211ENST00000629427 TAF4BQ92750 862 aa13.73□□□□□ -0.21
SHPRH-211ENST00000629427 RANBP6O60518 1105 aaKnown RBP13.72□□□□□ -0.21
SHPRH-211ENST00000629427 FCHSD2O94868 740 aa13.72□□□□□ -0.21
SHPRH-211ENST00000629427 USHBP1Q8N6Y0 703 aa13.72□□□□□ -0.21
SHPRH-211ENST00000629427 KIF1BPQ96EK5 621 aa13.72□□□□□ -0.21
SHPRH-211ENST00000629427 EPRSP07814 1512 aaKnown RBP13.72□□□□□ -0.21
SHPRH-211ENST00000629427 NSD3Q9BZ95 1437 aa13.72□□□□□ -0.21
SHPRH-211ENST00000629427 CUL5Q93034 780 aa13.72□□□□□ -0.21
SHPRH-211ENST00000629427 GOLGA6L7A0A1B0GV03 622 aa13.72□□□□□ -0.21
SHPRH-211ENST00000629427 IFIT5Q13325 482 aaKnown RBP13.72□□□□□ -0.21
SHPRH-211ENST00000629427 LARP1Q6PKG0 1096 aaKnown RBP13.72□□□□□ -0.21
SHPRH-211ENST00000629427 RBM10P98175 930 aaKnown RBP13.72□□□□□ -0.21
SHPRH-211ENST00000629427 PPP6R1Q9UPN7 881 aa13.72□□□□□ -0.21
SHPRH-211ENST00000629427 EIF3JO75822 258 aaKnown RBP13.72□□□□□ -0.21
SHPRH-211ENST00000629427 TMPOP42166 694 aaKnown RBP13.72□□□□□ -0.21
SHPRH-211ENST00000629427 CCDC150Q8NCX0 1101 aa13.72□□□□□ -0.21
SHPRH-211ENST00000629427 CETN2P41208 172 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 CFAP100Q494V2 611 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 ERLIN1O75477 346 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 HSP90AB3PQ58FF7 597 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 WAPLQ7Z5K2 1190 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 CCDC82Q8N4S0 544 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 TSG101Q99816 390 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 CCDC66A2RUB6 948 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 HMGN5P82970 282 aaKnown RBP13.71□□□□□ -0.21
SHPRH-211ENST00000629427 CCDC61Q9Y6R9 512 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 CAMK4Q16566 473 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 KLHL10Q6JEL2 608 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 FILIP1Q7Z7B0 1213 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 NGLY1Q96IV0 654 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 SLC5A1P13866 664 aa13.71□□□□□ -0.22
SHPRH-211ENST00000629427 MAP3K12Q12852 859 aa13.71□□□□□ -0.22
SHPRH-211ENST00000629427 TMEM57Q8N5G2 664 aa13.71□□□□□ -0.22
SHPRH-211ENST00000629427 RAB11FIP3O75154 756 aa13.7□□□□□ -0.22
SHPRH-211ENST00000629427 ANKRD30BQ9BXX2 1392 aa13.7□□□□□ -0.22
SHPRH-211ENST00000629427 IQCA1Q86XH1 822 aa13.7□□□□□ -0.22
SHPRH-211ENST00000629427 TRMT112Q9UI30 125 aaKnown RBP13.7□□□□□ -0.22
SHPRH-211ENST00000629427 CCDC148Q8NFR7 591 aa13.7□□□□□ -0.22
SHPRH-211ENST00000629427 SMARCA5O60264 1052 aaPredicted RBP13.69□□□□□ -0.22
SHPRH-211ENST00000629427 LIG1P18858 919 aa13.69□□□□□ -0.22
SHPRH-211ENST00000629427 CACNA2D4Q7Z3S7 1137 aa13.69□□□□□ -0.22
SHPRH-211ENST00000629427 CCDC83Q8IWF9 413 aa13.69□□□□□ -0.22
SHPRH-211ENST00000629427 SLF2Q8IX21 1173 aa13.69□□□□□ -0.22
SHPRH-211ENST00000629427 DRC1Q96MC2 740 aa13.69□□□□□ -0.22
SHPRH-211ENST00000629427 CCDC196A0A1B0GTZ2 297 aa13.69□□□□□ -0.22
SHPRH-211ENST00000629427 GUCY1B3Q02153 619 aa13.69□□□□□ -0.22
SHPRH-211ENST00000629427 ZNF213O14771 459 aa13.69□□□□□ -0.22
SHPRH-211ENST00000629427 TAF7Q15545 349 aaPredicted RBP13.69□□□□□ -0.22
SHPRH-211ENST00000629427 CTCFLQ8NI51 663 aaPredicted RBP13.69□□□□□ -0.22
SHPRH-211ENST00000629427 SPA17Q15506 151 aa13.68□□□□□ -0.22
SHPRH-211ENST00000629427 ARHGAP29Q52LW3 1261 aa13.68□□□□□ -0.22
SHPRH-211ENST00000629427 MRC2Q9UBG0 1479 aa13.68□□□□□ -0.22
SHPRH-211ENST00000629427 RPGRIP1LQ68CZ1 1315 aa13.68□□□□□ -0.22
SHPRH-211ENST00000629427 C6orf229H3BNL8 230 aa13.68□□□□□ -0.22
SHPRH-211ENST00000629427 TRMT1LQ7Z2T5 733 aaKnown RBP13.68□□□□□ -0.22
SHPRH-211ENST00000629427 THUMPD2Q9BTF0 503 aaKnown RBP13.68□□□□□ -0.22
SHPRH-211ENST00000629427 GLRX3O76003 335 aaKnown RBP13.68□□□□□ -0.22
SHPRH-211ENST00000629427 EHMT1Q9H9B1 1298 aa13.68□□□□□ -0.22
SHPRH-211ENST00000629427 SLC12A7Q9Y666 1083 aa13.68□□□□□ -0.22
SHPRH-211ENST00000629427 MAP3K11Q16584 847 aa13.68□□□□□ -0.22
SHPRH-211ENST00000629427 FKBP15Q5T1M5 1219 aa13.68□□□□□ -0.22
SHPRH-211ENST00000629427 CCDC91Q7Z6B0 441 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 RAB34Q9BZG1 259 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 GPTP24298 496 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 TMEM266Q2M3C6 531 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 SLC4A8Q2Y0W8 1093 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 AMOTQ4VCS5 1084 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 RPAP2Q8IXW5 612 aaPredicted RBP13.67□□□□□ -0.22
SHPRH-211ENST00000629427 CCDC113Q9H0I3 377 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 SNAPC4Q5SXM2 1469 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 SSRP1Q08945 709 aaKnown RBP13.67□□□□□ -0.22
SHPRH-211ENST00000629427 FEZ1Q99689 392 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 ANKRD18BA2A2Z9 1011 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 CCDC102AQ96A19 550 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 EFCAB5A4FU69 1503 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 NLRP5P59047 1200 aa13.66□□□□□ -0.22
SHPRH-211ENST00000629427 C8orf76Q96K31 380 aa13.66□□□□□ -0.22
SHPRH-211ENST00000629427 GRPEL1Q9HAV7 217 aa13.66□□□□□ -0.22
SHPRH-211ENST00000629427 FGFR1OPO95684 399 aaKnown RBP13.66□□□□□ -0.22
SHPRH-211ENST00000629427 PRPF40BQ6NWY9 871 aaKnown RBP13.66□□□□□ -0.22
SHPRH-211ENST00000629427 CTNNBL1Q8WYA6 563 aaPredicted RBP13.66□□□□□ -0.22
SHPRH-211ENST00000629427 GOPCQ9HD26 462 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms