RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 STRCP1A6NGW2 1772 aa15.72■□□□□ 0.11
SYNGAP1-207ENST00000628646 DDX58O95786 925 aaKnown RBP15.72■□□□□ 0.11
SYNGAP1-207ENST00000628646 SPATA31A1Q5TZJ5 1347 aa15.72■□□□□ 0.11
SYNGAP1-207ENST00000628646 RIC3Q7Z5B4 369 aa15.71■□□□□ 0.11
SYNGAP1-207ENST00000628646 PLEKHF1Q96S99 279 aa15.71■□□□□ 0.11
SYNGAP1-207ENST00000628646 MBIPQ9NS73 344 aa15.71■□□□□ 0.11
SYNGAP1-207ENST00000628646 PHLPP1O60346 1717 aa15.71■□□□□ 0.11
SYNGAP1-207ENST00000628646 SLC4A2P04920 1241 aa15.71■□□□□ 0.11
SYNGAP1-207ENST00000628646 SMARCC1Q92922 1105 aaPredicted RBP15.71■□□□□ 0.11
SYNGAP1-207ENST00000628646 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.71■□□□□ 0.11
SYNGAP1-207ENST00000628646 TRIM37O94972 964 aa15.71■□□□□ 0.1
SYNGAP1-207ENST00000628646 ATP6V1AP38606 617 aa15.71■□□□□ 0.1
SYNGAP1-207ENST00000628646 NEXNQ0ZGT2 675 aa15.71■□□□□ 0.1
SYNGAP1-207ENST00000628646 FAM177BA6PVY3 158 aa15.7■□□□□ 0.1
SYNGAP1-207ENST00000628646 APBA3O96018 575 aa15.7■□□□□ 0.1
SYNGAP1-207ENST00000628646 CENPQQ7L2Z9 268 aaPredicted RBP15.7■□□□□ 0.1
SYNGAP1-207ENST00000628646 ZNF428Q96B54 188 aa15.7■□□□□ 0.1
SYNGAP1-207ENST00000628646 KLHL34Q8N239 644 aa15.7■□□□□ 0.1
SYNGAP1-207ENST00000628646 SPATA31A5Q5VU36 1347 aa15.7■□□□□ 0.1
SYNGAP1-207ENST00000628646 SPATA31A7Q8IWB4 1347 aa15.7■□□□□ 0.1
SYNGAP1-207ENST00000628646 FAM196AQ6ZSG2 479 aa15.69■□□□□ 0.1
SYNGAP1-207ENST00000628646 IL17REQ8NFR9 667 aa15.69■□□□□ 0.1
SYNGAP1-207ENST00000628646 CYP27B1O15528 508 aa15.68■□□□□ 0.1
SYNGAP1-207ENST00000628646 CHMP3Q9Y3E7 222 aa15.68■□□□□ 0.1
SYNGAP1-207ENST00000628646 SLC52A2Q9HAB3 445 aa15.68■□□□□ 0.1
SYNGAP1-207ENST00000628646 ZKSCAN2Q63HK3 967 aa15.68■□□□□ 0.1
SYNGAP1-207ENST00000628646 KIF6Q6ZMV9 814 aa15.67■□□□□ 0.1
SYNGAP1-207ENST00000628646 SNRPA1P09661 255 aaKnown RBP15.67■□□□□ 0.1
SYNGAP1-207ENST00000628646 AK7Q96M32 723 aa15.67■□□□□ 0.1
SYNGAP1-207ENST00000628646 KRT24Q2M2I5 525 aa15.66■□□□□ 0.1
SYNGAP1-207ENST00000628646 FNBP4Q8N3X1 1017 aaPredicted RBP15.66■□□□□ 0.1
SYNGAP1-207ENST00000628646 TRIM35Q9UPQ4 493 aa15.66■□□□□ 0.1
SYNGAP1-207ENST00000628646 PHF14O94880 888 aa15.66■□□□□ 0.1
SYNGAP1-207ENST00000628646 ANXA1P04083 346 aa15.66■□□□□ 0.1
SYNGAP1-207ENST00000628646 RARSP54136 660 aaKnown RBP15.66■□□□□ 0.1
SYNGAP1-207ENST00000628646 PDE3AQ14432 1141 aa15.66■□□□□ 0.1
SYNGAP1-207ENST00000628646 CHMP4BQ9H444 224 aaKnown RBP15.66■□□□□ 0.1
SYNGAP1-207ENST00000628646 PIP4K2AP48426 406 aaPredicted RBP15.66■□□□□ 0.1
SYNGAP1-207ENST00000628646 ERVV-2B6SEH9 535 aa15.65■□□□□ 0.1
SYNGAP1-207ENST00000628646 IGHDP01880 384 aa15.65■□□□□ 0.1
SYNGAP1-207ENST00000628646 C8orf34Q49A92 452 aa15.65■□□□□ 0.1
SYNGAP1-207ENST00000628646 ZNF790Q6PG37 636 aa15.65■□□□□ 0.1
SYNGAP1-207ENST00000628646 MON2Q7Z3U7 1717 aa15.65■□□□□ 0.1
SYNGAP1-207ENST00000628646 CCNL1Q9UK58 526 aaPredicted RBP15.65■□□□□ 0.1
SYNGAP1-207ENST00000628646 MAP2P11137 1827 aaKnown RBP15.65■□□□□ 0.1
SYNGAP1-207ENST00000628646 OS9Q13438 667 aaPredicted RBP15.65■□□□□ 0.1
SYNGAP1-207ENST00000628646 TEX13AQ9BXU3 409 aaPredicted RBP15.64■□□□□ 0.09
SYNGAP1-207ENST00000628646 API5Q9BZZ5 524 aaKnown RBP15.64■□□□□ 0.09
SYNGAP1-207ENST00000628646 C9orf78Q9NZ63 289 aaPredicted RBP15.64■□□□□ 0.09
SYNGAP1-207ENST00000628646 BICDL1Q6ZP65 573 aa15.64■□□□□ 0.09
SYNGAP1-207ENST00000628646 AKAP12Q02952 1782 aa15.64■□□□□ 0.09
SYNGAP1-207ENST00000628646 KIF16BQ96L93 1317 aa15.64■□□□□ 0.09
SYNGAP1-207ENST00000628646 PRKCSHP14314 528 aaPredicted RBP15.63■□□□□ 0.09
SYNGAP1-207ENST00000628646 BAG6P46379 1132 aa15.63■□□□□ 0.09
SYNGAP1-207ENST00000628646 RTL5Q5HYW3 569 aaPredicted RBP15.63■□□□□ 0.09
SYNGAP1-207ENST00000628646 PPP1R1BQ9UD71 204 aaPredicted RBP15.63■□□□□ 0.09
SYNGAP1-207ENST00000628646 ASAP1Q9ULH1 1129 aa15.63■□□□□ 0.09
SYNGAP1-207ENST00000628646 TNNQ9UQP3 1299 aa15.63■□□□□ 0.09
SYNGAP1-207ENST00000628646 IL16Q14005 1332 aa15.63■□□□□ 0.09
SYNGAP1-207ENST00000628646 RLBP1P12271 317 aa15.63■□□□□ 0.09
SYNGAP1-207ENST00000628646 BARGINQ6ZT62 677 aa15.62■□□□□ 0.09
SYNGAP1-207ENST00000628646 C8orf58Q8NAV2 365 aa15.62■□□□□ 0.09
SYNGAP1-207ENST00000628646 HMGB2P26583 209 aaKnown RBP15.62■□□□□ 0.09
SYNGAP1-207ENST00000628646 ZNF496Q96IT1 587 aaPredicted RBP15.62■□□□□ 0.09
SYNGAP1-207ENST00000628646 COL5A2P05997 1499 aaPredicted RBP15.62■□□□□ 0.09
SYNGAP1-207ENST00000628646 KCNQ3O43525 872 aa15.62■□□□□ 0.09
SYNGAP1-207ENST00000628646 ZPR1O75312 459 aa15.61■□□□□ 0.09
SYNGAP1-207ENST00000628646 COG6Q9Y2V7 657 aa15.61■□□□□ 0.09
SYNGAP1-207ENST00000628646 KCNQ4P56696 695 aa15.61■□□□□ 0.09
SYNGAP1-207ENST00000628646 PANK1Q8TE04 598 aa15.61■□□□□ 0.09
SYNGAP1-207ENST00000628646 MED1Q15648 1581 aaPredicted RBP15.61■□□□□ 0.09
SYNGAP1-207ENST00000628646 MARCH10Q8NA82 808 aaPredicted RBP15.61■□□□□ 0.09
SYNGAP1-207ENST00000628646 TFCP2L1Q9NZI6 479 aa15.61■□□□□ 0.09
SYNGAP1-207ENST00000628646 KCNQ2O43526 872 aa15.6■□□□□ 0.09
SYNGAP1-207ENST00000628646 TAF7LQ5H9L4 462 aa15.6■□□□□ 0.09
SYNGAP1-207ENST00000628646 DBF4Q9UBU7 674 aaPredicted RBP15.6■□□□□ 0.09
SYNGAP1-207ENST00000628646 DZIP1LQ8IYY4 767 aaKnown RBP15.6■□□□□ 0.09
SYNGAP1-207ENST00000628646 APBB1O00213 710 aa15.6■□□□□ 0.09
SYNGAP1-207ENST00000628646 DNAJC10Q8IXB1 793 aa15.6■□□□□ 0.09
SYNGAP1-207ENST00000628646 NOB1Q9ULX3 412 aaKnown RBP15.6■□□□□ 0.09
SYNGAP1-207ENST00000628646 SSH1Q8WYL5 1049 aa15.6■□□□□ 0.09
SYNGAP1-207ENST00000628646 PIGBQ92521 554 aa15.6■□□□□ 0.09
SYNGAP1-207ENST00000628646 ZBTB3Q9H5J0 574 aa15.6■□□□□ 0.09
SYNGAP1-207ENST00000628646 PIK3C2AO00443 1686 aa15.59■□□□□ 0.09
SYNGAP1-207ENST00000628646 TSPYL6Q8N831 410 aa15.59■□□□□ 0.09
SYNGAP1-207ENST00000628646 NRKQ7Z2Y5 1582 aa15.59■□□□□ 0.09
SYNGAP1-207ENST00000628646 CAMTA1Q9Y6Y1 1673 aa15.59■□□□□ 0.09
SYNGAP1-207ENST00000628646 TOPAZ1Q8N9V7 1692 aa15.58■□□□□ 0.09
SYNGAP1-207ENST00000628646 CHL1O00533 1208 aa15.58■□□□□ 0.08
SYNGAP1-207ENST00000628646 CT47B1P0C2W7 299 aaPredicted RBP15.58■□□□□ 0.08
SYNGAP1-207ENST00000628646 CHPF2Q9P2E5 772 aa15.58■□□□□ 0.08
SYNGAP1-207ENST00000628646 RFC4P35249 363 aa15.58■□□□□ 0.08
SYNGAP1-207ENST00000628646 HDAC5Q9UQL6 1122 aa15.58■□□□□ 0.08
SYNGAP1-207ENST00000628646 GNPATO15228 680 aa15.57■□□□□ 0.08
SYNGAP1-207ENST00000628646 NBPF14Q5TI25 921 aa15.57■□□□□ 0.08
SYNGAP1-207ENST00000628646 UPF2Q9HAU5 1272 aaKnown RBP15.57■□□□□ 0.08
SYNGAP1-207ENST00000628646 LOC102724428A0A0B4J2F2 783 aa15.56■□□□□ 0.08
SYNGAP1-207ENST00000628646 SIK1P57059 783 aa15.56■□□□□ 0.08
SYNGAP1-207ENST00000628646 RTCBQ9Y3I0 505 aaKnown RBP15.56■□□□□ 0.08
SYNGAP1-207ENST00000628646 POTEAQ6S8J7 498 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms