RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 ISM2Q6H9L7 571 aa13.47□□□□□ -0.25
CLTC-215ENST00000621829 ANKS4BQ8N8V4 417 aa13.47□□□□□ -0.25
CLTC-215ENST00000621829 EVC2Q86UK5 1308 aa13.47□□□□□ -0.25
CLTC-215ENST00000621829 OGFRQ9NZT2 677 aa13.46□□□□□ -0.25
CLTC-215ENST00000621829 ANAPC15P60006 121 aa13.46□□□□□ -0.25
CLTC-215ENST00000621829 KIF3BO15066 747 aa13.46□□□□□ -0.25
CLTC-215ENST00000621829 FAM160A1Q05DH4 1040 aa13.46□□□□□ -0.25
CLTC-215ENST00000621829 CACNA2D4Q7Z3S7 1137 aa13.46□□□□□ -0.25
CLTC-215ENST00000621829 ZEB2O60315 1214 aa13.46□□□□□ -0.25
CLTC-215ENST00000621829 GNAI2P04899 355 aa13.46□□□□□ -0.25
CLTC-215ENST00000621829 EXOSC9Q06265 439 aaKnown RBP13.46□□□□□ -0.25
CLTC-215ENST00000621829 MIPOL1Q8TD10 442 aa13.46□□□□□ -0.25
CLTC-215ENST00000621829 NAA15Q9BXJ9 866 aaKnown RBP13.46□□□□□ -0.25
CLTC-215ENST00000621829 CCDC171Q6TFL3 1326 aa13.46□□□□□ -0.26
CLTC-215ENST00000621829 MXRA7P84157 204 aa13.46□□□□□ -0.26
CLTC-215ENST00000621829 PHACTR2O75167 634 aa13.46□□□□□ -0.26
CLTC-215ENST00000621829 CLNS1AP54105 237 aaKnown RBP13.46□□□□□ -0.26
CLTC-215ENST00000621829 HNRNPMP52272 730 aaKnown RBP eCLIP13.45□□□□□ -0.26
CLTC-215ENST00000621829 USO1O60763 962 aaKnown RBP13.45□□□□□ -0.26
CLTC-215ENST00000621829 TSR2Q969E8 191 aaKnown RBP13.45□□□□□ -0.26
CLTC-215ENST00000621829 BIN1O00499 593 aa13.45□□□□□ -0.26
CLTC-215ENST00000621829 PIBF1Q8WXW3 757 aa13.45□□□□□ -0.26
CLTC-215ENST00000621829 CARMIL1Q5VZK9 1371 aa13.45□□□□□ -0.26
CLTC-215ENST00000621829 CCDC96Q2M329 555 aa13.44□□□□□ -0.26
CLTC-215ENST00000621829 HCLS1P14317 486 aaPredicted RBP13.44□□□□□ -0.26
CLTC-215ENST00000621829 PRPF4BQ13523 1007 aaKnown RBP13.44□□□□□ -0.26
CLTC-215ENST00000621829 BANK1Q8NDB2 785 aa13.44□□□□□ -0.26
CLTC-215ENST00000621829 MACROD2A1Z1Q3 448 aa13.44□□□□□ -0.26
CLTC-215ENST00000621829 APBB1IPQ7Z5R6 666 aaPredicted RBP13.44□□□□□ -0.26
CLTC-215ENST00000621829 SUDS3Q9H7L9 328 aaPredicted RBP13.44□□□□□ -0.26
CLTC-215ENST00000621829 TBC1D2BQ9UPU7 963 aa13.44□□□□□ -0.26
CLTC-215ENST00000621829 ZSCAN31Q96LW9 406 aaPredicted RBP13.44□□□□□ -0.26
CLTC-215ENST00000621829 A0A1B0GUA9 196 aa13.44□□□□□ -0.26
CLTC-215ENST00000621829 A0A1W2PRG0 241 aa13.44□□□□□ -0.26
CLTC-215ENST00000621829 TTC12Q9H892 705 aaPredicted RBP13.44□□□□□ -0.26
CLTC-215ENST00000621829 DNAI1Q9UI46 699 aa13.44□□□□□ -0.26
CLTC-215ENST00000621829 NOL7Q9UMY1 257 aaKnown RBP13.44□□□□□ -0.26
CLTC-215ENST00000621829 FAM114A1Q8IWE2 563 aa13.43□□□□□ -0.26
CLTC-215ENST00000621829 GUCY1B3Q02153 619 aa13.43□□□□□ -0.26
CLTC-215ENST00000621829 MVPQ14764 893 aaKnown RBP13.43□□□□□ -0.26
CLTC-215ENST00000621829 LARP6Q9BRS8 491 aaKnown RBP13.43□□□□□ -0.26
CLTC-215ENST00000621829 SWAP70Q9UH65 585 aa13.43□□□□□ -0.26
CLTC-215ENST00000621829 FKBP15Q5T1M5 1219 aa13.43□□□□□ -0.26
CLTC-215ENST00000621829 MINK1Q8N4C8 1332 aaPredicted RBP13.43□□□□□ -0.26
CLTC-215ENST00000621829 LARP1Q6PKG0 1096 aaKnown RBP13.43□□□□□ -0.26
CLTC-215ENST00000621829 NBPF11Q86T75 865 aa13.43□□□□□ -0.26
CLTC-215ENST00000621829 CERS3Q8IU89 383 aa13.43□□□□□ -0.26
CLTC-215ENST00000621829 BAG4O95429 457 aaKnown RBP13.43□□□□□ -0.26
CLTC-215ENST00000621829 GNAI3P08754 354 aa13.43□□□□□ -0.26
CLTC-215ENST00000621829 STX1AQ16623 288 aa13.43□□□□□ -0.26
CLTC-215ENST00000621829 TTC39AQ5SRH9 613 aa13.43□□□□□ -0.26
CLTC-215ENST00000621829 TMCO4Q5TGY1 634 aa13.43□□□□□ -0.26
CLTC-215ENST00000621829 GIMAP6Q6P9H5 292 aa13.43□□□□□ -0.26
CLTC-215ENST00000621829 ALS2CR12Q96Q35 445 aa13.43□□□□□ -0.26
CLTC-215ENST00000621829 LRSAM1Q6UWE0 723 aa13.42□□□□□ -0.26
CLTC-215ENST00000621829 NSRP1Q9H0G5 558 aaKnown RBP13.42□□□□□ -0.26
CLTC-215ENST00000621829 TAOK3Q9H2K8 898 aa13.42□□□□□ -0.26
CLTC-215ENST00000621829 KIF3CO14782 793 aa13.42□□□□□ -0.26
CLTC-215ENST00000621829 TDRD12Q587J7 1177 aaKnown RBP13.42□□□□□ -0.26
CLTC-215ENST00000621829 U2AF2P26368 475 aaKnown RBP eCLIP13.42□□□□□ -0.262e-7■■■■□ 26.7
CLTC-215ENST00000621829 YEATS4O95619 227 aa13.42□□□□□ -0.26
CLTC-215ENST00000621829 HOOK3Q86VS8 718 aa13.42□□□□□ -0.26
CLTC-215ENST00000621829 TCP11L2Q8N4U5 519 aa13.42□□□□□ -0.26
CLTC-215ENST00000621829 ANKRD18BA2A2Z9 1011 aa13.42□□□□□ -0.26
CLTC-215ENST00000621829 FSD2A1L4K1 749 aa13.41□□□□□ -0.26
CLTC-215ENST00000621829 KIF20AO95235 890 aa13.41□□□□□ -0.26
CLTC-215ENST00000621829 PDE1CQ14123 709 aaPredicted RBP13.41□□□□□ -0.26
CLTC-215ENST00000621829 WWC2Q6AWC2 1192 aa13.41□□□□□ -0.26
CLTC-215ENST00000621829 GOLGA6L9A6NEM1 432 aa13.41□□□□□ -0.26
CLTC-215ENST00000621829 ZFYP08048 801 aaPredicted RBP13.41□□□□□ -0.26
CLTC-215ENST00000621829 DDX46Q7L014 1031 aaKnown RBP13.41□□□□□ -0.26
CLTC-215ENST00000621829 HOMER2Q9NSB8 354 aa13.41□□□□□ -0.26
CLTC-215ENST00000621829 ZKSCAN5Q9Y2L8 839 aa13.41□□□□□ -0.26
CLTC-215ENST00000621829 DDX54Q8TDD1 881 aaKnown RBP13.41□□□□□ -0.26
CLTC-215ENST00000621829 SETSIPP0DME0 302 aa13.41□□□□□ -0.26
CLTC-215ENST00000621829 LRCH2Q5VUJ6 765 aa13.41□□□□□ -0.26
CLTC-215ENST00000621829 ATP2B2Q01814 1243 aa13.4□□□□□ -0.26
CLTC-215ENST00000621829 SLU7O95391 586 aaKnown RBP13.4□□□□□ -0.26
CLTC-215ENST00000621829 BUB1BO60566 1050 aaPredicted RBP13.4□□□□□ -0.26
CLTC-215ENST00000621829 CCDC150Q8NCX0 1101 aa13.4□□□□□ -0.26
CLTC-215ENST00000621829 ZNF165P49910 485 aa13.4□□□□□ -0.26
CLTC-215ENST00000621829 WDR63Q8IWG1 891 aa13.4□□□□□ -0.26
CLTC-215ENST00000621829 CUX2O14529 1486 aa13.4□□□□□ -0.26
CLTC-215ENST00000621829 SKILP12757 684 aa13.4□□□□□ -0.26
CLTC-215ENST00000621829 RRAGDQ9NQL2 400 aaPredicted RBP13.4□□□□□ -0.26
CLTC-215ENST00000621829 CDKL5O76039 1030 aa13.4□□□□□ -0.26
CLTC-215ENST00000621829 FAM114A2Q9NRY5 505 aa13.4□□□□□ -0.26
CLTC-215ENST00000621829 UVSSAQ2YD98 709 aa13.4□□□□□ -0.27
CLTC-215ENST00000621829 SELENOSQ9BQE4 189 aa13.4□□□□□ -0.27
CLTC-215ENST00000621829 CTAGE5O15320 804 aa13.39□□□□□ -0.27
CLTC-215ENST00000621829 SLC3A2P08195 630 aaKnown RBP13.39□□□□□ -0.27
CLTC-215ENST00000621829 NOP2P46087 812 aaKnown RBP13.39□□□□□ -0.27
CLTC-215ENST00000621829 SOGA3Q5TF21 947 aa13.39□□□□□ -0.27
CLTC-215ENST00000621829 SCAND2PQ9GZW5 306 aaPredicted RBP13.39□□□□□ -0.27
CLTC-215ENST00000621829 CETN2P41208 172 aa13.39□□□□□ -0.27
CLTC-215ENST00000621829 OPA1O60313 960 aa13.39□□□□□ -0.27
CLTC-215ENST00000621829 GOLGA1Q92805 767 aa13.39□□□□□ -0.27
CLTC-215ENST00000621829 BMP2KQ9NSY1 1161 aaPredicted RBP13.39□□□□□ -0.27
CLTC-215ENST00000621829 TFIP11Q9UBB9 837 aaKnown RBP13.39□□□□□ -0.27
CLTC-215ENST00000621829 CCDC155Q8N6L0 562 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms