RNA–Protein interactions for RNA: ENST00000616579.4

TMPRSS4-219, Transcript of transmembrane serine protease 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TMPRSS4, Length 3,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-219ENST00000616579 GNAT3A8MTJ3 354 aa10.53□□□□□ -0.72
TMPRSS4-219ENST00000616579 MSNP26038 577 aaKnown RBP10.53□□□□□ -0.72
TMPRSS4-219ENST00000616579 HDGFL1Q5TGJ6 251 aa10.53□□□□□ -0.72
TMPRSS4-219ENST00000616579 PLEKHG3A1L390 1219 aa10.53□□□□□ -0.72
TMPRSS4-219ENST00000616579 SURF6O75683 361 aaKnown RBP10.53□□□□□ -0.72
TMPRSS4-219ENST00000616579 LTKP29376 864 aa10.53□□□□□ -0.72
TMPRSS4-219ENST00000616579 MX1P20591 662 aa10.52□□□□□ -0.72
TMPRSS4-219ENST00000616579 KLHL40Q2TBA0 621 aa10.52□□□□□ -0.72
TMPRSS4-219ENST00000616579 CHMP4AQ9BY43 222 aa10.52□□□□□ -0.72
TMPRSS4-219ENST00000616579 TAOK2Q9UL54 1235 aa10.52□□□□□ -0.72
TMPRSS4-219ENST00000616579 LRRFIP2Q9Y608 721 aaKnown RBP10.52□□□□□ -0.72
TMPRSS4-219ENST00000616579 DLC1Q96QB1 1528 aa10.52□□□□□ -0.72
TMPRSS4-219ENST00000616579 KIF20BQ96Q89 1820 aa10.52□□□□□ -0.72
TMPRSS4-219ENST00000616579 KIAA0232Q92628 1395 aa10.52□□□□□ -0.73
TMPRSS4-219ENST00000616579 TMEM2Q9UHN6 1383 aa10.52□□□□□ -0.73
TMPRSS4-219ENST00000616579 USHBP1Q8N6Y0 703 aa10.52□□□□□ -0.73
TMPRSS4-219ENST00000616579 DDIT3P35638 169 aa10.51□□□□□ -0.73
TMPRSS4-219ENST00000616579 PKP1Q13835 747 aa10.51□□□□□ -0.73
TMPRSS4-219ENST00000616579 KIAA1211Q6ZU35 1233 aa10.51□□□□□ -0.73
TMPRSS4-219ENST00000616579 MAP4K4O95819 1239 aaPredicted RBP10.51□□□□□ -0.73
TMPRSS4-219ENST00000616579 UPF3BQ9BZI7 483 aaKnown RBP10.51□□□□□ -0.73
TMPRSS4-219ENST00000616579 FLT4P35916 1363 aa10.51□□□□□ -0.73
TMPRSS4-219ENST00000616579 ANKRD26Q9UPS8 1709 aa10.51□□□□□ -0.73
TMPRSS4-219ENST00000616579 CLCN1P35523 988 aa10.5□□□□□ -0.73
TMPRSS4-219ENST00000616579 NUTM1Q86Y26 1132 aa10.5□□□□□ -0.73
TMPRSS4-219ENST00000616579 CLTCQ00610 1675 aaKnown RBP10.5□□□□□ -0.73
TMPRSS4-219ENST00000616579 TTC21AQ8NDW8 1320 aa10.5□□□□□ -0.73
TMPRSS4-219ENST00000616579 TEFQ10587 303 aa10.5□□□□□ -0.73
TMPRSS4-219ENST00000616579 TAF7Q15545 349 aaPredicted RBP10.5□□□□□ -0.73
TMPRSS4-219ENST00000616579 NCOA3Q9Y6Q9 1424 aa10.5□□□□□ -0.73
TMPRSS4-219ENST00000616579 PNMA6EA0A0J9YXQ4 647 aa10.49□□□□□ -0.73
TMPRSS4-219ENST00000616579 PTMAP06454 111 aaKnown RBP10.49□□□□□ -0.73
TMPRSS4-219ENST00000616579 CCDC173Q0VFZ6 552 aa10.49□□□□□ -0.73
TMPRSS4-219ENST00000616579 MCM2P49736 904 aa10.49□□□□□ -0.73
TMPRSS4-219ENST00000616579 DDX17Q92841 729 aaKnown RBP10.49□□□□□ -0.73
TMPRSS4-219ENST00000616579 CDC42BPGQ6DT37 1551 aa10.49□□□□□ -0.73
TMPRSS4-219ENST00000616579 TMX3Q96JJ7 454 aa10.49□□□□□ -0.73
TMPRSS4-219ENST00000616579 ESYT1Q9BSJ8 1104 aa10.49□□□□□ -0.73
TMPRSS4-219ENST00000616579 SRCIN1Q9C0H9 1055 aa10.49□□□□□ -0.73
TMPRSS4-219ENST00000616579 RBM27Q9P2N5 1060 aaKnown RBP10.49□□□□□ -0.73
TMPRSS4-219ENST00000616579 USP6P35125 1406 aa10.49□□□□□ -0.73
TMPRSS4-219ENST00000616579 SRGAP3O43295 1099 aa10.48□□□□□ -0.73
TMPRSS4-219ENST00000616579 ATP8B2P98198 1209 aa10.48□□□□□ -0.73
TMPRSS4-219ENST00000616579 RNF214Q8ND24 703 aa10.48□□□□□ -0.73
TMPRSS4-219ENST00000616579 KCNJ4P48050 445 aa10.48□□□□□ -0.73
TMPRSS4-219ENST00000616579 THEMISQ8N1K5 641 aaPredicted RBP10.48□□□□□ -0.73
TMPRSS4-219ENST00000616579 CHAMP1Q96JM3 812 aa10.48□□□□□ -0.73
TMPRSS4-219ENST00000616579 ATP10DQ9P241 1426 aa10.48□□□□□ -0.73
TMPRSS4-219ENST00000616579 SBNO1A3KN83 1393 aa10.47□□□□□ -0.73
TMPRSS4-219ENST00000616579 ZSCAN23Q3MJ62 389 aa10.47□□□□□ -0.73
TMPRSS4-219ENST00000616579 ARHGEF10O15013 1369 aa10.47□□□□□ -0.73
TMPRSS4-219ENST00000616579 DIP2BQ9P265 1576 aa10.47□□□□□ -0.73
TMPRSS4-219ENST00000616579 SYCE3A1L190 88 aa10.46□□□□□ -0.73
TMPRSS4-219ENST00000616579 ANXA1P04083 346 aa10.46□□□□□ -0.73
TMPRSS4-219ENST00000616579 PPP1R42Q7Z4L9 355 aa10.46□□□□□ -0.73
TMPRSS4-219ENST00000616579 PHAXQ9H814 394 aaKnown RBP10.46□□□□□ -0.73
TMPRSS4-219ENST00000616579 C9orf78Q9NZ63 289 aaPredicted RBP10.46□□□□□ -0.73
TMPRSS4-219ENST00000616579 HOXC9P31274 260 aa10.46□□□□□ -0.73
TMPRSS4-219ENST00000616579 PSME1Q06323 249 aa10.46□□□□□ -0.73
TMPRSS4-219ENST00000616579 SYAP1Q96A49 352 aaPredicted RBP10.46□□□□□ -0.73
TMPRSS4-219ENST00000616579 CCDC9Q9Y3X0 531 aaKnown RBP10.46□□□□□ -0.73
TMPRSS4-219ENST00000616579 CHMLP26374 656 aa10.46□□□□□ -0.74
TMPRSS4-219ENST00000616579 PLCB2Q00722 1185 aa10.46□□□□□ -0.74
TMPRSS4-219ENST00000616579 LMBRD1Q9NUN5 540 aa10.46□□□□□ -0.74
TMPRSS4-219ENST00000616579 KAT6BQ8WYB5 2073 aa10.45□□□□□ -0.74
TMPRSS4-219ENST00000616579 IL17REQ8NFR9 667 aa10.45□□□□□ -0.74
TMPRSS4-219ENST00000616579 DIAPH3Q9NSV4 1193 aa10.45□□□□□ -0.74
TMPRSS4-219ENST00000616579 SPATA31D1Q6ZQQ2 1576 aa10.45□□□□□ -0.74
TMPRSS4-219ENST00000616579 HTATSF1O43719 755 aaKnown RBP10.45□□□□□ -0.74
TMPRSS4-219ENST00000616579 MBD3O95983 291 aa10.45□□□□□ -0.74
TMPRSS4-219ENST00000616579 SAMD1Q6SPF0 538 aaPredicted RBP10.45□□□□□ -0.74
TMPRSS4-219ENST00000616579 ZNF330Q9Y3S2 320 aaPredicted RBP10.45□□□□□ -0.74
TMPRSS4-219ENST00000616579 AGLP35573 1532 aa10.45□□□□□ -0.74
TMPRSS4-219ENST00000616579 PRIM1P49642 420 aaKnown RBP10.45□□□□□ -0.74
TMPRSS4-219ENST00000616579 TAF7LQ5H9L4 462 aa10.45□□□□□ -0.74
TMPRSS4-219ENST00000616579 CNTROBQ8N137 903 aa10.45□□□□□ -0.74
TMPRSS4-219ENST00000616579 OSBPL3Q9H4L5 887 aa10.45□□□□□ -0.74
TMPRSS4-219ENST00000616579 GDPD2Q9HCC8 539 aa10.45□□□□□ -0.74
TMPRSS4-219ENST00000616579 PALD1Q9ULE6 856 aa10.45□□□□□ -0.74
TMPRSS4-219ENST00000616579 PI4KAP2A4QPH2 592 aa10.44□□□□□ -0.74
TMPRSS4-219ENST00000616579 CRB1P82279 1406 aa10.44□□□□□ -0.74
TMPRSS4-219ENST00000616579 C1orf141Q5JVX7 400 aa10.44□□□□□ -0.74
TMPRSS4-219ENST00000616579 CWC27Q6UX04 472 aaKnown RBP10.44□□□□□ -0.74
TMPRSS4-219ENST00000616579 IGSF1Q8N6C5 1336 aa10.44□□□□□ -0.74
TMPRSS4-219ENST00000616579 PI4KAP1Q8N8J0 262 aa10.44□□□□□ -0.74
TMPRSS4-219ENST00000616579 LARP6Q9BRS8 491 aaKnown RBP10.44□□□□□ -0.74
TMPRSS4-219ENST00000616579 TBX22Q9Y458 520 aa10.44□□□□□ -0.74
TMPRSS4-219ENST00000616579 OVOS2A0A0J9YW53 1432 aa10.44□□□□□ -0.74
TMPRSS4-219ENST00000616579 OVOS2Q6IE36 1432 aa10.44□□□□□ -0.74
TMPRSS4-219ENST00000616579 ZNF530Q6P9A1 599 aaPredicted RBP10.44□□□□□ -0.74
TMPRSS4-219ENST00000616579 KIF1BPQ96EK5 621 aa10.44□□□□□ -0.74
TMPRSS4-219ENST00000616579 USP44Q9H0E7 712 aa10.44□□□□□ -0.74
TMPRSS4-219ENST00000616579 KCNA6P17658 529 aa10.43□□□□□ -0.74
TMPRSS4-219ENST00000616579 HSP90AB4PQ58FF6 505 aa10.43□□□□□ -0.74
TMPRSS4-219ENST00000616579 ESCO1Q5FWF5 840 aa10.43□□□□□ -0.74
TMPRSS4-219ENST00000616579 ZSCAN30Q86W11 494 aa10.43□□□□□ -0.74
TMPRSS4-219ENST00000616579 CLASRPQ8N2M8 674 aaKnown RBP10.43□□□□□ -0.74
TMPRSS4-219ENST00000616579 RHPN1Q8TCX5 695 aa10.43□□□□□ -0.74
TMPRSS4-219ENST00000616579 MAP3K5Q99683 1374 aa10.43□□□□□ -0.74
TMPRSS4-219ENST00000616579 IFIT2P09913 472 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms