RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 LTV1Q96GA3 475 aaPredicted RBP15.11■□□□□ 0.01
SLIRP-212ENST00000613856 RSPH6AQ9H0K4 717 aa15.11■□□□□ 0.01
SLIRP-212ENST00000613856 WWC3Q9ULE0 1092 aa15.11■□□□□ 0.01
SLIRP-212ENST00000613856 C5P01031 1676 aa15.1■□□□□ 0.01
SLIRP-212ENST00000613856 NCBP3Q53F19 620 aaKnown RBP15.1■□□□□ 0.01
SLIRP-212ENST00000613856 PLEKHF1Q96S99 279 aa15.1■□□□□ 0.01
SLIRP-212ENST00000613856 MEGF6O75095 1541 aa15.1■□□□□ 0.01
SLIRP-212ENST00000613856 TAF1LQ8IZX4 1826 aa15.1■□□□□ 0.01
SLIRP-212ENST00000613856 TOGARAM1Q9Y4F4 1720 aa15.09■□□□□ 0.01
SLIRP-212ENST00000613856 CCDC146Q8IYE0 955 aa15.09■□□□□ 0.01
SLIRP-212ENST00000613856 DLG5Q8TDM6 1919 aa15.09■□□□□ 0.01
SLIRP-212ENST00000613856 ADCY9O60503 1353 aa15.09■□□□□ 0.01
SLIRP-212ENST00000613856 MSH5O43196 834 aa15.08■□□□□ 0
SLIRP-212ENST00000613856 CENPBP07199 599 aaPredicted RBP15.08■□□□□ 0
SLIRP-212ENST00000613856 SMIM5Q71RC9 77 aa15.08■□□□□ 0
SLIRP-212ENST00000613856 EYA1Q99502 592 aa15.08■□□□□ 0
SLIRP-212ENST00000613856 PRKAR2BP31323 418 aa15.07■□□□□ 0
SLIRP-212ENST00000613856 AMIGO3Q86WK7 504 aa15.07■□□□□ 0
SLIRP-212ENST00000613856 CCNL1Q9UK58 526 aaPredicted RBP15.07■□□□□ 0
SLIRP-212ENST00000613856 MAPK8IP3Q9UPT6 1336 aa15.07■□□□□ 0
SLIRP-212ENST00000613856 PLEKHG2Q9H7P9 1386 aa15.07■□□□□ 0
SLIRP-212ENST00000613856 APAF1O14727 1248 aa15.06■□□□□ 0
SLIRP-212ENST00000613856 HMOX1P09601 288 aa15.06■□□□□ 0
SLIRP-212ENST00000613856 SULT6B1Q6IMI4 303 aa15.06■□□□□ 0
SLIRP-212ENST00000613856 AEBP1Q8IUX7 1158 aa15.05■□□□□ -0
SLIRP-212ENST00000613856 ZNF521Q96K83 1311 aa15.05■□□□□ -0
SLIRP-212ENST00000613856 GRIN3BO60391 1043 aa15.04■□□□□ -0
SLIRP-212ENST00000613856 NEFMP07197 916 aa15.04■□□□□ -0
SLIRP-212ENST00000613856 HSPA6P17066 643 aa15.04■□□□□ -0
SLIRP-212ENST00000613856 CCDC27Q2M243 656 aa15.04■□□□□ -0
SLIRP-212ENST00000613856 GPBP1L1Q9HC44 474 aaPredicted RBP15.04■□□□□ -0
SLIRP-212ENST00000613856 NBPF6Q5VWK0 638 aa15.03■□□□□ -0
SLIRP-212ENST00000613856 NBPF4Q96M43 638 aa15.03■□□□□ -0
SLIRP-212ENST00000613856 UBR3Q6ZT12 1888 aa15.03■□□□□ -0
SLIRP-212ENST00000613856 ITGB4P16144 1822 aa15.02■□□□□ -0
SLIRP-212ENST00000613856 TMPOP42166 694 aaKnown RBP15.02■□□□□ -0
SLIRP-212ENST00000613856 USHBP1Q8N6Y0 703 aa15.02■□□□□ -0
SLIRP-212ENST00000613856 C4BP0C0L5 1744 aa15.02□□□□□ -0.01
SLIRP-212ENST00000613856 PKD1L3Q7Z443 1732 aa15.02□□□□□ -0.01
SLIRP-212ENST00000613856 NFE2L2Q16236 605 aa15.01□□□□□ -0.01
SLIRP-212ENST00000613856 ZCRB1Q8TBF4 217 aaKnown RBP15□□□□□ -0.01
SLIRP-212ENST00000613856 PHACTR3Q96KR7 559 aa15□□□□□ -0.01
SLIRP-212ENST00000613856 KIF3CO14782 793 aa14.99□□□□□ -0.01
SLIRP-212ENST00000613856 VIRMAQ69YN4 1812 aaKnown RBP14.99□□□□□ -0.01
SLIRP-212ENST00000613856 KIAA1551Q9HCM1 1747 aa14.98□□□□□ -0.01
SLIRP-212ENST00000613856 WWC1Q8IX03 1113 aa14.98□□□□□ -0.01
SLIRP-212ENST00000613856 CD2APQ9Y5K6 639 aa14.98□□□□□ -0.01
SLIRP-212ENST00000613856 LMOD3Q0VAK6 560 aa14.97□□□□□ -0.01
SLIRP-212ENST00000613856 GAS2L2Q8NHY3 880 aa14.97□□□□□ -0.01
SLIRP-212ENST00000613856 RRP7AQ9Y3A4 280 aaKnown RBP14.97□□□□□ -0.01
SLIRP-212ENST00000613856 SALL2Q9Y467 1007 aaPredicted RBP14.97□□□□□ -0.01
SLIRP-212ENST00000613856 N4BP2Q86UW6 1770 aaPredicted RBP14.97□□□□□ -0.01
SLIRP-212ENST00000613856 PALLDQ8WX93 1383 aa14.97□□□□□ -0.01
SLIRP-212ENST00000613856 ADAMTS7Q9UKP4 1686 aa14.97□□□□□ -0.01
SLIRP-212ENST00000613856 RIPK4P57078 832 aa14.96□□□□□ -0.01
SLIRP-212ENST00000613856 WDR63Q8IWG1 891 aa14.96□□□□□ -0.01
SLIRP-212ENST00000613856 TRIM35Q9UPQ4 493 aa14.96□□□□□ -0.01
SLIRP-212ENST00000613856 PHF14O94880 888 aa14.95□□□□□ -0.02
SLIRP-212ENST00000613856 GOLGA2Q08379 1002 aa14.95□□□□□ -0.02
SLIRP-212ENST00000613856 CICQ96RK0 1608 aaPredicted RBP14.95□□□□□ -0.02
SLIRP-212ENST00000613856 IL16Q14005 1332 aa14.94□□□□□ -0.02
SLIRP-212ENST00000613856 NEUROD2Q15784 382 aa14.94□□□□□ -0.02
SLIRP-212ENST00000613856 MTHFSDQ2M296 383 aaKnown RBP14.94□□□□□ -0.02
SLIRP-212ENST00000613856 AMOTQ4VCS5 1084 aa14.94□□□□□ -0.02
SLIRP-212ENST00000613856 MPRIPQ6WCQ1 1025 aa14.93□□□□□ -0.02
SLIRP-212ENST00000613856 RAPGEF4Q8WZA2 1011 aa14.93□□□□□ -0.02
SLIRP-212ENST00000613856 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.93□□□□□ -0.02
SLIRP-212ENST00000613856 E9PSI1 815 aa14.92□□□□□ -0.02
SLIRP-212ENST00000613856 HTATSF1O43719 755 aaKnown RBP14.92□□□□□ -0.02
SLIRP-212ENST00000613856 TATP17735 454 aaPredicted RBP14.92□□□□□ -0.02
SLIRP-212ENST00000613856 HTRA3P83110 453 aa14.92□□□□□ -0.02
SLIRP-212ENST00000613856 CALD1Q05682 793 aaKnown RBP14.92□□□□□ -0.02
SLIRP-212ENST00000613856 PLEKHO1Q53GL0 409 aaPredicted RBP14.92□□□□□ -0.02
SLIRP-212ENST00000613856 TRMT2AQ8IZ69 625 aaKnown RBP14.92□□□□□ -0.02
SLIRP-212ENST00000613856 DNAJC5GQ8N7S2 189 aa14.92□□□□□ -0.02
SLIRP-212ENST00000613856 SCN11AQ9UI33 1791 aa14.92□□□□□ -0.02
SLIRP-212ENST00000613856 KIF13BQ9NQT8 1826 aa14.92□□□□□ -0.02
SLIRP-212ENST00000613856 WDR90Q96KV7 1748 aa14.92□□□□□ -0.02
SLIRP-212ENST00000613856 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.91□□□□□ -0.02
SLIRP-212ENST00000613856 CYP27B1O15528 508 aa14.91□□□□□ -0.02
SLIRP-212ENST00000613856 SLFN5Q08AF3 891 aa14.91□□□□□ -0.02
SLIRP-212ENST00000613856 LINC00116Q8NCU8 138 aa14.9□□□□□ -0.02
SLIRP-212ENST00000613856 CDCA7LQ96GN5 454 aa14.9□□□□□ -0.02
SLIRP-212ENST00000613856 SIPA1L3O60292 1781 aaPredicted RBP14.9□□□□□ -0.02
SLIRP-212ENST00000613856 PXDNLA1KZ92 1463 aa14.89□□□□□ -0.03
SLIRP-212ENST00000613856 BRCA1P38398 1863 aaKnown RBP14.89□□□□□ -0.03
SLIRP-212ENST00000613856 GNAT3A8MTJ3 354 aa14.89□□□□□ -0.03
SLIRP-212ENST00000613856 DUSP27Q5VZP5 1158 aa14.89□□□□□ -0.03
SLIRP-212ENST00000613856 AK7Q96M32 723 aa14.89□□□□□ -0.03
SLIRP-212ENST00000613856 CEMIPQ8WUJ3 1361 aa14.88□□□□□ -0.03
SLIRP-212ENST00000613856 AKAP4Q5JQC9 854 aa14.88□□□□□ -0.03
SLIRP-212ENST00000613856 ZNF530Q6P9A1 599 aaPredicted RBP14.88□□□□□ -0.03
SLIRP-212ENST00000613856 PIGBQ92521 554 aa14.88□□□□□ -0.03
SLIRP-212ENST00000613856 MYH16Q9H6N6 1097 aa14.88□□□□□ -0.03
SLIRP-212ENST00000613856 NMRK2Q9NPI5 230 aa14.88□□□□□ -0.03
SLIRP-212ENST00000613856 SPINK5Q9NQ38 1064 aaPredicted RBP14.88□□□□□ -0.03
SLIRP-212ENST00000613856 SPG7Q9UQ90 795 aa14.88□□□□□ -0.03
SLIRP-212ENST00000613856 ITPK1Q13572 414 aa14.87□□□□□ -0.03
SLIRP-212ENST00000613856 FLAD1Q8NFF5 587 aa14.87□□□□□ -0.03
SLIRP-212ENST00000613856 RTF1Q92541 710 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms