RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 AATKQ6ZMQ8 1374 aa17.14■□□□□ 0.33
COL6A1-207ENST00000612273 RGS12O14924 1447 aa17.14■□□□□ 0.33
COL6A1-207ENST00000612273 PLCB2Q00722 1185 aa17.14■□□□□ 0.33
COL6A1-207ENST00000612273 ESYT1Q9BSJ8 1104 aa17.13■□□□□ 0.33
COL6A1-207ENST00000612273 CPA1P15085 419 aa17.13■□□□□ 0.33
COL6A1-207ENST00000612273 PTMSP20962 102 aa17.13■□□□□ 0.33
COL6A1-207ENST00000612273 CCT4P50991 539 aaKnown RBP17.13■□□□□ 0.33
COL6A1-207ENST00000612273 HDGFP51858 240 aaKnown RBP17.13■□□□□ 0.33
COL6A1-207ENST00000612273 ISY1Q9ULR0 285 aaKnown RBP17.13■□□□□ 0.33
COL6A1-207ENST00000612273 R3HCC1Q9Y3T6 440 aaKnown RBP17.12■□□□□ 0.33
COL6A1-207ENST00000612273 TSPOAP1O95153 1857 aa17.12■□□□□ 0.33
COL6A1-207ENST00000612273 UBTFL1P0CB47 393 aaPredicted RBP17.11■□□□□ 0.33
COL6A1-207ENST00000612273 OS9Q13438 667 aaPredicted RBP17.11■□□□□ 0.33
COL6A1-207ENST00000612273 AMOTL2Q9Y2J4 779 aa17.11■□□□□ 0.33
COL6A1-207ENST00000612273 KNDC1Q76NI1 1749 aa17.11■□□□□ 0.33
COL6A1-207ENST00000612273 PTMAP06454 111 aaKnown RBP17.11■□□□□ 0.33
COL6A1-207ENST00000612273 ZSCAN30Q86W11 494 aa17.11■□□□□ 0.33
COL6A1-207ENST00000612273 HDGFL1Q5TGJ6 251 aa17.1■□□□□ 0.33
COL6A1-207ENST00000612273 CWC22Q9HCG8 908 aaKnown RBP17.1■□□□□ 0.33
COL6A1-207ENST00000612273 KIF20BQ96Q89 1820 aa17.1■□□□□ 0.33
COL6A1-207ENST00000612273 CYP2E1P05181 493 aaPredicted RBP17.1■□□□□ 0.33
COL6A1-207ENST00000612273 MCCP23508 829 aa17.1■□□□□ 0.33
COL6A1-207ENST00000612273 CHMLP26374 656 aa17.1■□□□□ 0.33
COL6A1-207ENST00000612273 SPG7Q9UQ90 795 aa17.1■□□□□ 0.33
COL6A1-207ENST00000612273 GADD45BO75293 160 aaPredicted RBP17.09■□□□□ 0.33
COL6A1-207ENST00000612273 CCDC30Q5VVM6 783 aa17.09■□□□□ 0.33
COL6A1-207ENST00000612273 LMOD2Q6P5Q4 547 aa17.09■□□□□ 0.33
COL6A1-207ENST00000612273 VSIG10Q8N0Z9 540 aa17.09■□□□□ 0.33
COL6A1-207ENST00000612273 CWC27Q6UX04 472 aaKnown RBP17.09■□□□□ 0.33
COL6A1-207ENST00000612273 ABTB2Q8N961 1025 aa17.09■□□□□ 0.33
COL6A1-207ENST00000612273 UBE2Q2Q8WVN8 375 aa17.09■□□□□ 0.33
COL6A1-207ENST00000612273 SRGAP3O43295 1099 aa17.08■□□□□ 0.33
COL6A1-207ENST00000612273 IL17REQ8NFR9 667 aa17.08■□□□□ 0.33
COL6A1-207ENST00000612273 PPP1R42Q7Z4L9 355 aa17.08■□□□□ 0.32
COL6A1-207ENST00000612273 GNAT3A8MTJ3 354 aa17.08■□□□□ 0.32
COL6A1-207ENST00000612273 GNAI3P08754 354 aa17.08■□□□□ 0.32
COL6A1-207ENST00000612273 CHMP3Q9Y3E7 222 aa17.08■□□□□ 0.32
COL6A1-207ENST00000612273 USP44Q9H0E7 712 aa17.07■□□□□ 0.32
COL6A1-207ENST00000612273 ANKRD26Q9UPS8 1709 aa17.06■□□□□ 0.32
COL6A1-207ENST00000612273 KCNQ3O43525 872 aa17.06■□□□□ 0.32
COL6A1-207ENST00000612273 NBPF7P0C2Y1 421 aaPredicted RBP17.06■□□□□ 0.32
COL6A1-207ENST00000612273 DLG5Q8TDM6 1919 aa17.06■□□□□ 0.32
COL6A1-207ENST00000612273 ZNF830Q96NB3 372 aaPredicted RBP17.06■□□□□ 0.32
COL6A1-207ENST00000612273 FAM13BQ9NYF5 915 aa17.06■□□□□ 0.32
COL6A1-207ENST00000612273 CRB1P82279 1406 aa17.06■□□□□ 0.32
COL6A1-207ENST00000612273 ZNF445P59923 1031 aa17.06■□□□□ 0.32
COL6A1-207ENST00000612273 ATP8B2P98198 1209 aa17.06■□□□□ 0.32
COL6A1-207ENST00000612273 KIAA0232Q92628 1395 aa17.05■□□□□ 0.32
COL6A1-207ENST00000612273 RICTORQ6R327 1708 aa17.05■□□□□ 0.32
COL6A1-207ENST00000612273 TAF7Q15545 349 aaPredicted RBP17.05■□□□□ 0.32
COL6A1-207ENST00000612273 CDC42BPGQ6DT37 1551 aa17.05■□□□□ 0.32
COL6A1-207ENST00000612273 PPP1R9BQ96SB3 815 aa17.05■□□□□ 0.32
COL6A1-207ENST00000612273 LGR6Q9HBX8 967 aa17.04■□□□□ 0.32
COL6A1-207ENST00000612273 PI4KAP2A4QPH2 592 aa17.04■□□□□ 0.32
COL6A1-207ENST00000612273 FIBPO43427 364 aa17.04■□□□□ 0.32
COL6A1-207ENST00000612273 CLEC17AQ6ZS10 378 aa17.04■□□□□ 0.32
COL6A1-207ENST00000612273 PI4KAP1Q8N8J0 262 aa17.04■□□□□ 0.32
COL6A1-207ENST00000612273 CLTCQ00610 1675 aaKnown RBP17.03■□□□□ 0.32
COL6A1-207ENST00000612273 KIF24Q5T7B8 1368 aa17.02■□□□□ 0.32
COL6A1-207ENST00000612273 PLEKHG3A1L390 1219 aa17.02■□□□□ 0.32
COL6A1-207ENST00000612273 CHPF2Q9P2E5 772 aa17.02■□□□□ 0.32
COL6A1-207ENST00000612273 EID1Q9Y6B2 187 aa17.02■□□□□ 0.32
COL6A1-207ENST00000612273 TNRQ92752 1358 aa17.02■□□□□ 0.32
COL6A1-207ENST00000612273 LRSAM1Q6UWE0 723 aa17.02■□□□□ 0.32
COL6A1-207ENST00000612273 USP48Q86UV5 1035 aa17.02■□□□□ 0.32
COL6A1-207ENST00000612273 PA2G4Q9UQ80 394 aaKnown RBP17.02■□□□□ 0.32
COL6A1-207ENST00000612273 USP6P35125 1406 aa17.02■□□□□ 0.32
COL6A1-207ENST00000612273 DNTTIP2Q5QJE6 756 aaKnown RBP17.02■□□□□ 0.31
COL6A1-207ENST00000612273 MPRIPQ6WCQ1 1025 aa17.02■□□□□ 0.31
COL6A1-207ENST00000612273 RASEFQ8IZ41 740 aa17.02■□□□□ 0.31
COL6A1-207ENST00000612273 CNPY2Q9Y2B0 182 aa17.02■□□□□ 0.31
COL6A1-207ENST00000612273 DLC1Q96QB1 1528 aa17.02■□□□□ 0.31
COL6A1-207ENST00000612273 TCEANC2Q96MN5 208 aa17.01■□□□□ 0.31
COL6A1-207ENST00000612273 SRCIN1Q9C0H9 1055 aa17.01■□□□□ 0.31
COL6A1-207ENST00000612273 AIMP1Q12904 312 aaKnown RBP17.01■□□□□ 0.31
COL6A1-207ENST00000612273 OSBPL3Q9H4L5 887 aa17.01■□□□□ 0.31
COL6A1-207ENST00000612273 BRD1O95696 1058 aa17.01■□□□□ 0.31
COL6A1-207ENST00000612273 RHPN1Q8TCX5 695 aa17.01■□□□□ 0.31
COL6A1-207ENST00000612273 LRRC59Q96AG4 307 aaKnown RBP17.01■□□□□ 0.31
COL6A1-207ENST00000612273 CCDC9Q9Y3X0 531 aaKnown RBP17.01■□□□□ 0.31
COL6A1-207ENST00000612273 SOS1Q07889 1333 aaPredicted RBP17■□□□□ 0.31
COL6A1-207ENST00000612273 TMEM2Q9UHN6 1383 aa17■□□□□ 0.31
COL6A1-207ENST00000612273 FLT4P35916 1363 aa17■□□□□ 0.31
COL6A1-207ENST00000612273 HOXC9P31274 260 aa17■□□□□ 0.31
COL6A1-207ENST00000612273 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.99■□□□□ 0.31
COL6A1-207ENST00000612273 KCNJ4P48050 445 aa16.99■□□□□ 0.31
COL6A1-207ENST00000612273 C17orf53Q8N3J3 647 aaPredicted RBP16.99■□□□□ 0.31
COL6A1-207ENST00000612273 USP25Q9UHP3 1055 aa16.99■□□□□ 0.31
COL6A1-207ENST00000612273 SIL1Q9H173 461 aa16.99■□□□□ 0.31
COL6A1-207ENST00000612273 CASTP20810 708 aaKnown RBP16.98■□□□□ 0.31
COL6A1-207ENST00000612273 CCDC83Q8IWF9 413 aa16.98■□□□□ 0.31
COL6A1-207ENST00000612273 JARID2Q92833 1246 aaPredicted RBP16.98■□□□□ 0.31
COL6A1-207ENST00000612273 IBTKQ9P2D0 1353 aaPredicted RBP16.98■□□□□ 0.31
COL6A1-207ENST00000612273 RIMS1Q86UR5 1692 aaKnown RBP16.98■□□□□ 0.31
COL6A1-207ENST00000612273 VPS37CA5D8V6 355 aaPredicted RBP16.98■□□□□ 0.31
COL6A1-207ENST00000612273 AK2P54819 239 aa16.98■□□□□ 0.31
COL6A1-207ENST00000612273 FERMT3Q86UX7 667 aa16.98■□□□□ 0.31
COL6A1-207ENST00000612273 TSPY26PQ9H489 355 aa16.98■□□□□ 0.31
COL6A1-207ENST00000612273 PRAMEF22A3QJZ6 481 aa16.97■□□□□ 0.31
COL6A1-207ENST00000612273 OVOS2A0A0J9YW53 1432 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms