RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 PLEKHF1Q96S99 279 aa11.64□□□□□ -0.55
SMAD4-217ENST00000611848 GNAT3A8MTJ3 354 aa11.64□□□□□ -0.55
SMAD4-217ENST00000611848 RNMTO43148 476 aaKnown RBP11.64□□□□□ -0.55
SMAD4-217ENST00000611848 CABP4P57796 275 aa11.64□□□□□ -0.55
SMAD4-217ENST00000611848 SMARCC1Q92922 1105 aaPredicted RBP11.64□□□□□ -0.55
SMAD4-217ENST00000611848 RREB1Q92766 1687 aa11.63□□□□□ -0.55
SMAD4-217ENST00000611848 MAP3K5Q99683 1374 aa11.63□□□□□ -0.55
SMAD4-217ENST00000611848 TXNRD1Q16881 649 aa11.63□□□□□ -0.55
SMAD4-217ENST00000611848 FAM9BQ8IZU0 186 aa11.63□□□□□ -0.55
SMAD4-217ENST00000611848 PROM2Q8N271 834 aa11.63□□□□□ -0.55
SMAD4-217ENST00000611848 ADAMTS8Q9UP79 889 aa11.63□□□□□ -0.55
SMAD4-217ENST00000611848 ZBED9Q6R2W3 1325 aa11.63□□□□□ -0.55
SMAD4-217ENST00000611848 MAPK8IP3Q9UPT6 1336 aa11.63□□□□□ -0.55
SMAD4-217ENST00000611848 ADAMTS7Q9UKP4 1686 aa11.62□□□□□ -0.55
SMAD4-217ENST00000611848 LY75O60449 1722 aa11.62□□□□□ -0.55
SMAD4-217ENST00000611848 HMGB2P26583 209 aaKnown RBP11.62□□□□□ -0.55
SMAD4-217ENST00000611848 SLC27A3Q5K4L6 730 aa11.62□□□□□ -0.55
SMAD4-217ENST00000611848 LGR6Q9HBX8 967 aa11.62□□□□□ -0.55
SMAD4-217ENST00000611848 HTATSF1O43719 755 aaKnown RBP11.61□□□□□ -0.55
SMAD4-217ENST00000611848 NBPF14Q5TI25 921 aa11.61□□□□□ -0.55
SMAD4-217ENST00000611848 NFATC2IPQ8NCF5 419 aa11.61□□□□□ -0.55
SMAD4-217ENST00000611848 RTF1Q92541 710 aaKnown RBP11.61□□□□□ -0.55
SMAD4-217ENST00000611848 SLC52A2Q9HAB3 445 aa11.61□□□□□ -0.55
SMAD4-217ENST00000611848 NUP188Q5SRE5 1749 aa11.61□□□□□ -0.55
SMAD4-217ENST00000611848 DLG5Q8TDM6 1919 aa11.61□□□□□ -0.55
SMAD4-217ENST00000611848 FKBP8Q14318 412 aa11.6□□□□□ -0.55
SMAD4-217ENST00000611848 NFE2L2Q16236 605 aa11.6□□□□□ -0.55
SMAD4-217ENST00000611848 IL17REQ8NFR9 667 aa11.6□□□□□ -0.55
SMAD4-217ENST00000611848 PNISRQ8TF01 805 aaKnown RBP11.6□□□□□ -0.55
SMAD4-217ENST00000611848 PALLDQ8WX93 1383 aa11.6□□□□□ -0.55
SMAD4-217ENST00000611848 RUNDC1Q96C34 613 aa11.6□□□□□ -0.55
SMAD4-217ENST00000611848 MRC1P22897 1456 aa11.6□□□□□ -0.55
SMAD4-217ENST00000611848 ATXN8OSP0DMR3 200 aa11.6□□□□□ -0.55
SMAD4-217ENST00000611848 ATG3Q9NT62 314 aa11.6□□□□□ -0.55
SMAD4-217ENST00000611848 CEMIPQ8WUJ3 1361 aa11.59□□□□□ -0.55
SMAD4-217ENST00000611848 NEFLP07196 543 aa11.59□□□□□ -0.55
SMAD4-217ENST00000611848 TEFQ10587 303 aa11.59□□□□□ -0.55
SMAD4-217ENST00000611848 CCNL1Q9UK58 526 aaPredicted RBP11.59□□□□□ -0.55
SMAD4-217ENST00000611848 ASAP1Q9ULH1 1129 aa11.59□□□□□ -0.55
SMAD4-217ENST00000611848 CCDC146Q8IYE0 955 aa11.58□□□□□ -0.56
SMAD4-217ENST00000611848 LRRC4BQ9NT99 713 aa11.58□□□□□ -0.56
SMAD4-217ENST00000611848 LOC102724428A0A0B4J2F2 783 aa11.57□□□□□ -0.56
SMAD4-217ENST00000611848 TMPOP42166 694 aaKnown RBP11.57□□□□□ -0.56
SMAD4-217ENST00000611848 SIK1P57059 783 aa11.57□□□□□ -0.56
SMAD4-217ENST00000611848 RIPK4P57078 832 aa11.57□□□□□ -0.56
SMAD4-217ENST00000611848 LMOD3Q0VAK6 560 aa11.57□□□□□ -0.56
SMAD4-217ENST00000611848 MCM10Q7L590 875 aa11.57□□□□□ -0.56
SMAD4-217ENST00000611848 STK32BQ9NY57 414 aa11.57□□□□□ -0.56
SMAD4-217ENST00000611848 SIPA1L3O60292 1781 aaPredicted RBP11.57□□□□□ -0.56
SMAD4-217ENST00000611848 TAF1LQ8IZX4 1826 aa11.56□□□□□ -0.56
SMAD4-217ENST00000611848 PAPPAQ13219 1627 aa11.56□□□□□ -0.56
SMAD4-217ENST00000611848 ZNF831Q5JPB2 1677 aa11.55□□□□□ -0.56
SMAD4-217ENST00000611848 ATP6V1AP38606 617 aa11.55□□□□□ -0.56
SMAD4-217ENST00000611848 DCTN1Q14203 1278 aa11.55□□□□□ -0.56
SMAD4-217ENST00000611848 SLC15A2Q16348 729 aa11.55□□□□□ -0.56
SMAD4-217ENST00000611848 RBM42Q9BTD8 480 aaKnown RBP11.55□□□□□ -0.56
SMAD4-217ENST00000611848 ANO8Q9HCE9 1232 aaPredicted RBP11.55□□□□□ -0.56
SMAD4-217ENST00000611848 BTBD11A6QL63 1104 aa11.54□□□□□ -0.56
SMAD4-217ENST00000611848 KCNQ4P56696 695 aa11.54□□□□□ -0.56
SMAD4-217ENST00000611848 SLC39A6Q13433 755 aa11.54□□□□□ -0.56
SMAD4-217ENST00000611848 R3HDM1Q15032 1099 aaKnown RBP11.54□□□□□ -0.56
SMAD4-217ENST00000611848 TAF7Q15545 349 aaPredicted RBP11.54□□□□□ -0.56
SMAD4-217ENST00000611848 TTC5Q8N0Z6 440 aa11.54□□□□□ -0.56
SMAD4-217ENST00000611848 C5P01031 1676 aa11.54□□□□□ -0.56
SMAD4-217ENST00000611848 APAF1O14727 1248 aa11.53□□□□□ -0.56
SMAD4-217ENST00000611848 PTCD1O75127 700 aaKnown RBP11.53□□□□□ -0.56
SMAD4-217ENST00000611848 NEUROD2Q15784 382 aa11.53□□□□□ -0.56
SMAD4-217ENST00000611848 ZNF790Q6PG37 636 aa11.53□□□□□ -0.56
SMAD4-217ENST00000611848 AKT1S1Q96B36 256 aa11.53□□□□□ -0.56
SMAD4-217ENST00000611848 RRP7AQ9Y3A4 280 aaKnown RBP11.53□□□□□ -0.56
SMAD4-217ENST00000611848 PSDA5PKW4 1024 aaPredicted RBP11.53□□□□□ -0.56
SMAD4-217ENST00000611848 ERICH6BQ5W0A0 696 aa11.53□□□□□ -0.56
SMAD4-217ENST00000611848 SLC4A9Q96Q91 983 aa11.53□□□□□ -0.56
SMAD4-217ENST00000611848 UBR2Q8IWV8 1755 aa11.52□□□□□ -0.57
SMAD4-217ENST00000611848 ITPK1Q13572 414 aa11.52□□□□□ -0.57
SMAD4-217ENST00000611848 ZNF827Q17R98 1081 aa11.52□□□□□ -0.57
SMAD4-217ENST00000611848 VSIG10Q8N0Z9 540 aa11.52□□□□□ -0.57
SMAD4-217ENST00000611848 KCPQ6ZWJ8 1503 aa11.51□□□□□ -0.57
SMAD4-217ENST00000611848 C4BP0C0L5 1744 aa11.51□□□□□ -0.57
SMAD4-217ENST00000611848 QSER1Q2KHR3 1735 aa11.51□□□□□ -0.57
SMAD4-217ENST00000611848 SLC4A2P04920 1241 aa11.51□□□□□ -0.57
SMAD4-217ENST00000611848 LINC00116Q8NCU8 138 aa11.51□□□□□ -0.57
SMAD4-217ENST00000611848 FMNL2Q96PY5 1086 aa11.51□□□□□ -0.57
SMAD4-217ENST00000611848 THUMPD2Q9BTF0 503 aaKnown RBP11.51□□□□□ -0.57
SMAD4-217ENST00000611848 TFCP2L1Q9NZI6 479 aa11.51□□□□□ -0.57
SMAD4-217ENST00000611848 TRIM35Q9UPQ4 493 aa11.51□□□□□ -0.57
SMAD4-217ENST00000611848 CICQ96RK0 1608 aaPredicted RBP11.51□□□□□ -0.57
SMAD4-217ENST00000611848 MYCNP04198 464 aaPredicted RBP11.5□□□□□ -0.57
SMAD4-217ENST00000611848 RC3H1Q5TC82 1133 aaKnown RBP11.5□□□□□ -0.57
SMAD4-217ENST00000611848 AK7Q96M32 723 aa11.5□□□□□ -0.57
SMAD4-217ENST00000611848 BABAM1Q9NWV8 329 aa11.5□□□□□ -0.57
SMAD4-217ENST00000611848 COL5A3P25940 1745 aaPredicted RBP11.5□□□□□ -0.57
SMAD4-217ENST00000611848 MYH14Q7Z406 1995 aaKnown RBP11.5□□□□□ -0.57
SMAD4-217ENST00000611848 FLAD1Q8NFF5 587 aa11.49□□□□□ -0.57
SMAD4-217ENST00000611848 ZNF496Q96IT1 587 aaPredicted RBP11.49□□□□□ -0.57
SMAD4-217ENST00000611848 TEX13AQ9BXU3 409 aaPredicted RBP11.49□□□□□ -0.57
SMAD4-217ENST00000611848 CNTNAP4Q9C0A0 1308 aa11.49□□□□□ -0.57
SMAD4-217ENST00000611848 TUBGCP6Q96RT7 1819 aa11.49□□□□□ -0.57
SMAD4-217ENST00000611848 TJP1Q07157 1748 aa11.49□□□□□ -0.57
SMAD4-217ENST00000611848 HEG1Q9ULI3 1381 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms