RNA–Protein interactions for RNA: ENST00000609429.5

LINC00635-222, long intergenic non-protein coding RNA 635, human

TSL 5

Gene LINC00635, Length 743 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00635-222	ENST00000609429	SULT6B1	Q6IMI4	303 aa		11.93	□□□□□ -0.5
LINC00635-222	ENST00000609429	BRWD3	Q6RI45	1802 aa		11.93	□□□□□ -0.5
LINC00635-222	ENST00000609429	SHANK3	Q9BYB0	1731 aa		11.92	□□□□□ -0.5
LINC00635-222	ENST00000609429	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.92	□□□□□ -0.5
LINC00635-222	ENST00000609429	MRS2	Q9HD23	443 aa		11.92	□□□□□ -0.5
LINC00635-222	ENST00000609429	KRT27	Q7Z3Y8	459 aa		11.91	□□□□□ -0.5
LINC00635-222	ENST00000609429	PROM2	Q8N271	834 aa		11.91	□□□□□ -0.5
LINC00635-222	ENST00000609429	USHBP1	Q8N6Y0	703 aa		11.91	□□□□□ -0.5
LINC00635-222	ENST00000609429	ZCRB1	Q8TBF4	217 aa	Known RBP	11.91	□□□□□ -0.5
LINC00635-222	ENST00000609429	MAPK8IP3	Q9UPT6	1336 aa		11.9	□□□□□ -0.5
LINC00635-222	ENST00000609429	HSP90AB1	P08238	724 aa	Known RBP	11.9	□□□□□ -0.5
LINC00635-222	ENST00000609429	GAS2L2	Q8NHY3	880 aa		11.9	□□□□□ -0.5
LINC00635-222	ENST00000609429	RSPH6A	Q9H0K4	717 aa		11.9	□□□□□ -0.5
LINC00635-222	ENST00000609429	EP400	Q96L91	3159 aa		11.89	□□□□□ -0.51
LINC00635-222	ENST00000609429	NHS	Q6T4R5	1651 aa		11.88	□□□□□ -0.51
LINC00635-222	ENST00000609429	HMOX1	P09601	288 aa		11.88	□□□□□ -0.51
LINC00635-222	ENST00000609429	C1orf141	Q5JVX7	400 aa		11.88	□□□□□ -0.51
LINC00635-222	ENST00000609429	FAM196A	Q6ZSG2	479 aa		11.88	□□□□□ -0.51
LINC00635-222	ENST00000609429	AEBP1	Q8IUX7	1158 aa		11.88	□□□□□ -0.51
LINC00635-222	ENST00000609429	IFNL2	Q8IZJ0	200 aa		11.88	□□□□□ -0.51
LINC00635-222	ENST00000609429	MAP3K13	O43283	966 aa		11.87	□□□□□ -0.51
LINC00635-222	ENST00000609429	PRKAR2B	P31323	418 aa		11.87	□□□□□ -0.51
LINC00635-222	ENST00000609429	TIE1	P35590	1138 aa		11.87	□□□□□ -0.51
LINC00635-222	ENST00000609429	COLQ	Q9Y215	455 aa	Predicted RBP	11.87	□□□□□ -0.51
LINC00635-222	ENST00000609429	ADAMTS7	Q9UKP4	1686 aa		11.87	□□□□□ -0.51
LINC00635-222	ENST00000609429	DOT1L	Q8TEK3	1739 aa		11.86	□□□□□ -0.51
LINC00635-222	ENST00000609429	AKAP4	Q5JQC9	854 aa		11.86	□□□□□ -0.51
LINC00635-222	ENST00000609429	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.86	□□□□□ -0.51
LINC00635-222	ENST00000609429	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.86	□□□□□ -0.51
LINC00635-222	ENST00000609429	RGPD4	Q7Z3J3	1758 aa		11.86	□□□□□ -0.51
LINC00635-222	ENST00000609429	MAP3K5	Q99683	1374 aa		11.85	□□□□□ -0.51
LINC00635-222	ENST00000609429	HTATSF1	O43719	755 aa	Known RBP	11.85	□□□□□ -0.51
LINC00635-222	ENST00000609429	PHKG2	P15735	406 aa		11.85	□□□□□ -0.51
LINC00635-222	ENST00000609429	LMOD3	Q0VAK6	560 aa		11.85	□□□□□ -0.51
LINC00635-222	ENST00000609429	NKX1-1	Q15270	411 aa	Predicted RBP	11.85	□□□□□ -0.51
LINC00635-222	ENST00000609429	CCDC125	Q86Z20	511 aa		11.85	□□□□□ -0.51
LINC00635-222	ENST00000609429	NGEF	Q8N5V2	710 aa		11.85	□□□□□ -0.51
LINC00635-222	ENST00000609429	PNISR	Q8TF01	805 aa	Known RBP	11.85	□□□□□ -0.51
LINC00635-222	ENST00000609429	RUNDC1	Q96C34	613 aa		11.85	□□□□□ -0.51
LINC00635-222	ENST00000609429	DCAF5	Q96JK2	942 aa		11.85	□□□□□ -0.51
LINC00635-222	ENST00000609429	SBF2	Q86WG5	1849 aa		11.85	□□□□□ -0.51
LINC00635-222	ENST00000609429	SCN11A	Q9UI33	1791 aa		11.84	□□□□□ -0.51
LINC00635-222	ENST00000609429	MARCH10	Q8NA82	808 aa	Predicted RBP	11.84	□□□□□ -0.51
LINC00635-222	ENST00000609429	MRC1	P22897	1456 aa		11.83	□□□□□ -0.52
LINC00635-222	ENST00000609429	GNAT3	A8MTJ3	354 aa		11.83	□□□□□ -0.52
LINC00635-222	ENST00000609429	CYP27B1	O15528	508 aa		11.83	□□□□□ -0.52
LINC00635-222	ENST00000609429	HMGB2	P26583	209 aa	Known RBP	11.83	□□□□□ -0.52
LINC00635-222	ENST00000609429	DDX54	Q8TDD1	881 aa	Known RBP	11.83	□□□□□ -0.52
LINC00635-222	ENST00000609429	PLEKHF1	Q96S99	279 aa		11.83	□□□□□ -0.52
LINC00635-222	ENST00000609429	ADAMTS8	Q9UP79	889 aa		11.83	□□□□□ -0.52
LINC00635-222	ENST00000609429	VIRMA	Q69YN4	1812 aa	Known RBP	11.83	□□□□□ -0.52
LINC00635-222	ENST00000609429	TNS1	Q9HBL0	1735 aa	Known RBP	11.83	□□□□□ -0.52
LINC00635-222	ENST00000609429	ERVV-2	B6SEH9	535 aa		11.82	□□□□□ -0.52
LINC00635-222	ENST00000609429	NFE2L2	Q16236	605 aa		11.82	□□□□□ -0.52
LINC00635-222	ENST00000609429	MTHFSD	Q2M296	383 aa	Known RBP	11.82	□□□□□ -0.52
LINC00635-222	ENST00000609429	RTF1	Q92541	710 aa	Known RBP	11.82	□□□□□ -0.52
LINC00635-222	ENST00000609429	TOGARAM1	Q9Y4F4	1720 aa		11.82	□□□□□ -0.52
LINC00635-222	ENST00000609429	DLG5	Q8TDM6	1919 aa		11.82	□□□□□ -0.52
LINC00635-222	ENST00000609429	TTLL13P	A6NNM8	815 aa		11.81	□□□□□ -0.52
LINC00635-222	ENST00000609429	SF3B2	Q13435	895 aa	Known RBP	11.81	□□□□□ -0.52
LINC00635-222	ENST00000609429	CDAN1	Q8IWY9	1227 aa		11.81	□□□□□ -0.52
LINC00635-222	ENST00000609429	CALD1	Q05682	793 aa	Known RBP	11.8	□□□□□ -0.52
LINC00635-222	ENST00000609429	RASEF	Q8IZ41	740 aa		11.8	□□□□□ -0.52
LINC00635-222	ENST00000609429	MIER1	Q8N108	512 aa		11.8	□□□□□ -0.52
LINC00635-222	ENST00000609429	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.8	□□□□□ -0.52
LINC00635-222	ENST00000609429	ITGB4	P16144	1822 aa		11.8	□□□□□ -0.52
LINC00635-222	ENST00000609429	CEMIP	Q8WUJ3	1361 aa		11.79	□□□□□ -0.52
LINC00635-222	ENST00000609429	KDM6A	O15550	1401 aa	Predicted RBP	11.79	□□□□□ -0.52
LINC00635-222	ENST00000609429	CCDC184	Q52MB2	194 aa		11.79	□□□□□ -0.52
LINC00635-222	ENST00000609429	PHACTR3	Q96KR7	559 aa		11.79	□□□□□ -0.52
LINC00635-222	ENST00000609429	SIPA1L3	O60292	1781 aa	Predicted RBP	11.79	□□□□□ -0.52
LINC00635-222	ENST00000609429	BTAF1	O14981	1849 aa		11.79	□□□□□ -0.52
LINC00635-222	ENST00000609429	TMPO	P42166	694 aa	Known RBP	11.78	□□□□□ -0.52
LINC00635-222	ENST00000609429	TEF	Q10587	303 aa		11.78	□□□□□ -0.52
LINC00635-222	ENST00000609429	FAM9B	Q8IZU0	186 aa		11.78	□□□□□ -0.52
LINC00635-222	ENST00000609429	TMOD3	Q9NYL9	352 aa		11.78	□□□□□ -0.52
LINC00635-222	ENST00000609429	PAPPA	Q13219	1627 aa		11.78	□□□□□ -0.52
LINC00635-222	ENST00000609429	ZNF831	Q5JPB2	1677 aa		11.78	□□□□□ -0.52
LINC00635-222	ENST00000609429	RNMT	O43148	476 aa	Known RBP	11.77	□□□□□ -0.53
LINC00635-222	ENST00000609429	BAG6	P46379	1132 aa		11.77	□□□□□ -0.53
LINC00635-222	ENST00000609429	CCDC27	Q2M243	656 aa		11.77	□□□□□ -0.53
LINC00635-222	ENST00000609429	SMARCC1	Q92922	1105 aa	Predicted RBP	11.77	□□□□□ -0.53
LINC00635-222	ENST00000609429	CIC	Q96RK0	1608 aa	Predicted RBP	11.77	□□□□□ -0.53
LINC00635-222	ENST00000609429	SEC24B	O95487	1268 aa		11.76	□□□□□ -0.53
LINC00635-222	ENST00000609429	RIPK4	P57078	832 aa		11.76	□□□□□ -0.53
LINC00635-222	ENST00000609429	CABP4	P57796	275 aa		11.76	□□□□□ -0.53
LINC00635-222	ENST00000609429	ILDR2	Q71H61	639 aa		11.76	□□□□□ -0.53
LINC00635-222	ENST00000609429	CCDC146	Q8IYE0	955 aa		11.76	□□□□□ -0.53
LINC00635-222	ENST00000609429	SLC52A2	Q9HAB3	445 aa		11.76	□□□□□ -0.53
LINC00635-222	ENST00000609429	BABAM1	Q9NWV8	329 aa		11.76	□□□□□ -0.53
LINC00635-222	ENST00000609429	LY75	O60449	1722 aa		11.75	□□□□□ -0.53
LINC00635-222	ENST00000609429	PLSCR1	O15162	318 aa		11.75	□□□□□ -0.53
LINC00635-222	ENST00000609429	MPRIP	Q6WCQ1	1025 aa		11.75	□□□□□ -0.53
LINC00635-222	ENST00000609429	SYTL4	Q96C24	671 aa	Predicted RBP	11.75	□□□□□ -0.53
LINC00635-222	ENST00000609429	UBR2	Q8IWV8	1755 aa		11.74	□□□□□ -0.53
LINC00635-222	ENST00000609429	APAF1	O14727	1248 aa		11.74	□□□□□ -0.53
LINC00635-222	ENST00000609429	TRIM37	O94972	964 aa		11.74	□□□□□ -0.53
LINC00635-222	ENST00000609429	PRIM1	P49642	420 aa	Known RBP	11.74	□□□□□ -0.53
LINC00635-222	ENST00000609429	FAM182B	Q5T319	152 aa		11.74	□□□□□ -0.53
LINC00635-222	ENST00000609429	RREB1	Q92766	1687 aa		11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms