RNA–Protein interactions for RNA: ENST00000602897.1

PPFIA3-212, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 1,615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-212ENST00000602897 THUMPD2Q9BTF0 503 aaKnown RBP28.72■■■□□ 2.19
PPFIA3-212ENST00000602897 PTF1AQ7RTS3 328 aa28.71■■■□□ 2.19
PPFIA3-212ENST00000602897 MEGF6O75095 1541 aa28.71■■■□□ 2.19
PPFIA3-212ENST00000602897 LAS1LQ9Y4W2 734 aaKnown RBP28.7■■■□□ 2.19
PPFIA3-212ENST00000602897 GNAT3A8MTJ3 354 aa28.69■■■□□ 2.18
PPFIA3-212ENST00000602897 ALDH1L2Q3SY69 923 aa28.69■■■□□ 2.18
PPFIA3-212ENST00000602897 ZCRB1Q8TBF4 217 aaKnown RBP28.69■■■□□ 2.18
PPFIA3-212ENST00000602897 MBIPQ9NS73 344 aa28.69■■■□□ 2.18
PPFIA3-212ENST00000602897 CHL1O00533 1208 aa28.69■■■□□ 2.18
PPFIA3-212ENST00000602897 PLEKHG2Q9H7P9 1386 aa28.68■■■□□ 2.18
PPFIA3-212ENST00000602897 SBF2Q86WG5 1849 aa28.68■■■□□ 2.18
PPFIA3-212ENST00000602897 AMOTQ4VCS5 1084 aa28.68■■■□□ 2.18
PPFIA3-212ENST00000602897 CCDC136Q96JN2 1154 aa28.68■■■□□ 2.18
PPFIA3-212ENST00000602897 CRBNQ96SW2 442 aa28.68■■■□□ 2.18
PPFIA3-212ENST00000602897 TATP17735 454 aaPredicted RBP28.67■■■□□ 2.18
PPFIA3-212ENST00000602897 MS4A1P11836 297 aa28.66■■■□□ 2.18
PPFIA3-212ENST00000602897 DCTN1Q14203 1278 aa28.66■■■□□ 2.18
PPFIA3-212ENST00000602897 PLEKHO1Q53GL0 409 aaPredicted RBP28.66■■■□□ 2.18
PPFIA3-212ENST00000602897 ACSBG1Q96GR2 724 aa28.66■■■□□ 2.18
PPFIA3-212ENST00000602897 MAP3K5Q99683 1374 aa28.66■■■□□ 2.18
PPFIA3-212ENST00000602897 KCNQ2O43526 872 aa28.65■■■□□ 2.18
PPFIA3-212ENST00000602897 CANXP27824 592 aaKnown RBP28.65■■■□□ 2.18
PPFIA3-212ENST00000602897 BRPF1P55201 1214 aaPredicted RBP28.65■■■□□ 2.18
PPFIA3-212ENST00000602897 MCM10Q7L590 875 aa28.65■■■□□ 2.18
PPFIA3-212ENST00000602897 BABAM1Q9NWV8 329 aa28.65■■■□□ 2.18
PPFIA3-212ENST00000602897 C20orf194Q5TEA3 1177 aa28.65■■■□□ 2.18
PPFIA3-212ENST00000602897 B4GALNT3Q6L9W6 998 aa28.65■■■□□ 2.18
PPFIA3-212ENST00000602897 PLSCR1O15162 318 aa28.63■■■□□ 2.17
PPFIA3-212ENST00000602897 VAMP4O75379 141 aa28.61■■■□□ 2.17
PPFIA3-212ENST00000602897 AAMPQ13685 434 aa28.61■■■□□ 2.17
PPFIA3-212ENST00000602897 SMC4Q9NTJ3 1288 aa28.61■■■□□ 2.17
PPFIA3-212ENST00000602897 SSH1Q8WYL5 1049 aa28.61■■■□□ 2.17
PPFIA3-212ENST00000602897 ZKSCAN2Q63HK3 967 aa28.6■■■□□ 2.17
PPFIA3-212ENST00000602897 KIF16BQ96L93 1317 aa28.59■■■□□ 2.17
PPFIA3-212ENST00000602897 FRAT1Q92837 279 aaPredicted RBP28.59■■■□□ 2.17
PPFIA3-212ENST00000602897 PSDA5PKW4 1024 aaPredicted RBP28.58■■■□□ 2.17
PPFIA3-212ENST00000602897 IPO8O15397 1037 aaKnown RBP28.58■■■□□ 2.17
PPFIA3-212ENST00000602897 TWISTNBQ3B726 338 aaPredicted RBP28.58■■■□□ 2.17
PPFIA3-212ENST00000602897 AKAP4Q5JQC9 854 aa28.58■■■□□ 2.17
PPFIA3-212ENST00000602897 NHSQ6T4R5 1651 aa28.57■■■□□ 2.16
PPFIA3-212ENST00000602897 PCDH11XQ9BZA7 1347 aa28.56■■■□□ 2.16
PPFIA3-212ENST00000602897 PCDH11YQ9BZA8 1340 aa28.56■■■□□ 2.16
PPFIA3-212ENST00000602897 R3HDM1Q15032 1099 aaKnown RBP28.55■■■□□ 2.16
PPFIA3-212ENST00000602897 BCL2L13Q9BXK5 485 aa28.55■■■□□ 2.16
PPFIA3-212ENST00000602897 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.55■■■□□ 2.16
PPFIA3-212ENST00000602897 SHANK3Q9BYB0 1731 aa28.55■■■□□ 2.16
PPFIA3-212ENST00000602897 RREB1Q92766 1687 aa28.55■■■□□ 2.16
PPFIA3-212ENST00000602897 IL17REQ8NFR9 667 aa28.54■■■□□ 2.16
PPFIA3-212ENST00000602897 SYTL4Q96C24 671 aaPredicted RBP28.54■■■□□ 2.16
PPFIA3-212ENST00000602897 CEMIPQ8WUJ3 1361 aa28.54■■■□□ 2.16
PPFIA3-212ENST00000602897 SOS1Q07889 1333 aaPredicted RBP28.54■■■□□ 2.16
PPFIA3-212ENST00000602897 NBPF14Q5TI25 921 aa28.54■■■□□ 2.16
PPFIA3-212ENST00000602897 C8orf58Q8NAV2 365 aa28.54■■■□□ 2.16
PPFIA3-212ENST00000602897 TAF7Q15545 349 aaPredicted RBP28.53■■■□□ 2.16
PPFIA3-212ENST00000602897 ZNF530Q6P9A1 599 aaPredicted RBP28.53■■■□□ 2.16
PPFIA3-212ENST00000602897 RGPD3A6NKT7 1758 aaPredicted RBP28.52■■■□□ 2.16
PPFIA3-212ENST00000602897 RGPD4Q7Z3J3 1758 aa28.52■■■□□ 2.16
PPFIA3-212ENST00000602897 PRIM1P49642 420 aaKnown RBP28.52■■■□□ 2.16
PPFIA3-212ENST00000602897 PROM2Q8N271 834 aa28.52■■■□□ 2.16
PPFIA3-212ENST00000602897 TSPYL6Q8N831 410 aa28.52■■■□□ 2.16
PPFIA3-212ENST00000602897 ARHGAP45Q92619 1136 aa28.52■■■□□ 2.16
PPFIA3-212ENST00000602897 TSPYL4Q9UJ04 414 aa28.52■■■□□ 2.16
PPFIA3-212ENST00000602897 SPG7Q9UQ90 795 aa28.52■■■□□ 2.16
PPFIA3-212ENST00000602897 KAT6BQ8WYB5 2073 aa28.52■■■□□ 2.16
PPFIA3-212ENST00000602897 C1orf141Q5JVX7 400 aa28.51■■■□□ 2.15
PPFIA3-212ENST00000602897 SRCAPQ6ZRS2 3230 aa28.51■■■□□ 2.15
PPFIA3-212ENST00000602897 NUP188Q5SRE5 1749 aa28.51■■■□□ 2.15
PPFIA3-212ENST00000602897 CYP27B1O15528 508 aa28.51■■■□□ 2.15
PPFIA3-212ENST00000602897 TXNRD1Q16881 649 aa28.51■■■□□ 2.15
PPFIA3-212ENST00000602897 ATF7IPQ6VMQ6 1270 aa28.51■■■□□ 2.15
PPFIA3-212ENST00000602897 DZIP1LQ8IYY4 767 aaKnown RBP28.51■■■□□ 2.15
PPFIA3-212ENST00000602897 MRPL50Q8N5N7 158 aaKnown RBP28.49■■■□□ 2.15
PPFIA3-212ENST00000602897 PANK1Q8TE04 598 aa28.49■■■□□ 2.15
PPFIA3-212ENST00000602897 NOB1Q9ULX3 412 aaKnown RBP28.48■■■□□ 2.15
PPFIA3-212ENST00000602897 BTAF1O14981 1849 aa28.47■■■□□ 2.15
PPFIA3-212ENST00000602897 PKD1L3Q7Z443 1732 aa28.46■■■□□ 2.15
PPFIA3-212ENST00000602897 FTSJ3Q8IY81 847 aaKnown RBP28.46■■■□□ 2.15
PPFIA3-212ENST00000602897 DOT1LQ8TEK3 1739 aa28.46■■■□□ 2.15
PPFIA3-212ENST00000602897 ELL2O00472 640 aaPredicted RBP28.45■■■□□ 2.14
PPFIA3-212ENST00000602897 TRIM27P14373 513 aa28.45■■■□□ 2.14
PPFIA3-212ENST00000602897 COG6Q9Y2V7 657 aa28.45■■■□□ 2.14
PPFIA3-212ENST00000602897 MVPQ14764 893 aaKnown RBP28.43■■■□□ 2.14
PPFIA3-212ENST00000602897 RNMTO43148 476 aaKnown RBP28.43■■■□□ 2.14
PPFIA3-212ENST00000602897 RLBP1P12271 317 aa28.43■■■□□ 2.14
PPFIA3-212ENST00000602897 CHMP4AQ9BY43 222 aa28.43■■■□□ 2.14
PPFIA3-212ENST00000602897 ANO8Q9HCE9 1232 aaPredicted RBP28.42■■■□□ 2.14
PPFIA3-212ENST00000602897 ADAMTS7Q9UKP4 1686 aa28.42■■■□□ 2.14
PPFIA3-212ENST00000602897 TEFQ10587 303 aa28.41■■■□□ 2.14
PPFIA3-212ENST00000602897 IFNL2Q8IZJ0 200 aa28.41■■■□□ 2.14
PPFIA3-212ENST00000602897 CLUAP1Q96AJ1 413 aa28.41■■■□□ 2.14
PPFIA3-212ENST00000602897 MIS18AQ9NYP9 233 aa28.41■■■□□ 2.14
PPFIA3-212ENST00000602897 NKX1-1Q15270 411 aaPredicted RBP28.4■■■□□ 2.14
PPFIA3-212ENST00000602897 LGR6Q9HBX8 967 aa28.4■■■□□ 2.14
PPFIA3-212ENST00000602897 PHKG2P15735 406 aa28.4■■■□□ 2.14
PPFIA3-212ENST00000602897 API5Q9BZZ5 524 aaKnown RBP28.4■■■□□ 2.14
PPFIA3-212ENST00000602897 DDX19BQ9UMR2 479 aa28.4■■■□□ 2.14
PPFIA3-212ENST00000602897 CENPQQ7L2Z9 268 aaPredicted RBP28.39■■■□□ 2.13
PPFIA3-212ENST00000602897 CHMP4BQ9H444 224 aaKnown RBP28.39■■■□□ 2.13
PPFIA3-212ENST00000602897 MPRIPQ6WCQ1 1025 aa28.38■■■□□ 2.13
PPFIA3-212ENST00000602897 HSP90AB1P08238 724 aaKnown RBP28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms