RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 RSPH6AQ9H0K4 717 aa15.48■□□□□ 0.07
CHMP2A-207ENST00000600804 TFCP2L1Q9NZI6 479 aa15.48■□□□□ 0.07
CHMP2A-207ENST00000600804 KIAA1551Q9HCM1 1747 aa15.48■□□□□ 0.07
CHMP2A-207ENST00000600804 POLD1P28340 1107 aa15.47■□□□□ 0.07
CHMP2A-207ENST00000600804 SULT6B1Q6IMI4 303 aa15.47■□□□□ 0.07
CHMP2A-207ENST00000600804 ADAMTS8Q9UP79 889 aa15.47■□□□□ 0.07
CHMP2A-207ENST00000600804 PELP1Q8IZL8 1130 aaKnown RBP15.46■□□□□ 0.07
CHMP2A-207ENST00000600804 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.46■□□□□ 0.07
CHMP2A-207ENST00000600804 CCNL1Q9UK58 526 aaPredicted RBP15.46■□□□□ 0.07
CHMP2A-207ENST00000600804 AMIGO3Q86WK7 504 aa15.45■□□□□ 0.06
CHMP2A-207ENST00000600804 AEBP1Q8IUX7 1158 aa15.45■□□□□ 0.06
CHMP2A-207ENST00000600804 PLEKHF1Q96S99 279 aa15.45■□□□□ 0.06
CHMP2A-207ENST00000600804 MSL1Q68DK7 614 aa15.44■□□□□ 0.06
CHMP2A-207ENST00000600804 KIF13BQ9NQT8 1826 aa15.44■□□□□ 0.06
CHMP2A-207ENST00000600804 GIGYF1O75420 1035 aaPredicted RBP15.43■□□□□ 0.06
CHMP2A-207ENST00000600804 NCBP3Q53F19 620 aaKnown RBP15.43■□□□□ 0.06
CHMP2A-207ENST00000600804 RAPGEF4Q8WZA2 1011 aa15.43■□□□□ 0.06
CHMP2A-207ENST00000600804 N4BP2Q86UW6 1770 aaPredicted RBP15.42■□□□□ 0.06
CHMP2A-207ENST00000600804 HMOX1P09601 288 aa15.42■□□□□ 0.06
CHMP2A-207ENST00000600804 TATP17735 454 aaPredicted RBP15.42■□□□□ 0.06
CHMP2A-207ENST00000600804 PRKAR2BP31323 418 aa15.42■□□□□ 0.06
CHMP2A-207ENST00000600804 AMOTQ4VCS5 1084 aa15.42■□□□□ 0.06
CHMP2A-207ENST00000600804 RUNDC1Q96C34 613 aa15.42■□□□□ 0.06
CHMP2A-207ENST00000600804 ATP10DQ9P241 1426 aa15.42■□□□□ 0.06
CHMP2A-207ENST00000600804 BRCA1P38398 1863 aaKnown RBP15.41■□□□□ 0.06
CHMP2A-207ENST00000600804 ADCY9O60503 1353 aa15.4■□□□□ 0.06
CHMP2A-207ENST00000600804 PALLDQ8WX93 1383 aa15.4■□□□□ 0.06
CHMP2A-207ENST00000600804 SMIM5Q71RC9 77 aa15.4■□□□□ 0.06
CHMP2A-207ENST00000600804 FAM9BQ8IZU0 186 aa15.4■□□□□ 0.06
CHMP2A-207ENST00000600804 COL5A3P25940 1745 aaPredicted RBP15.4■□□□□ 0.06
CHMP2A-207ENST00000600804 CYP27B1O15528 508 aa15.39■□□□□ 0.05
CHMP2A-207ENST00000600804 MSH5O43196 834 aa15.39■□□□□ 0.05
CHMP2A-207ENST00000600804 NEFMP07197 916 aa15.39■□□□□ 0.05
CHMP2A-207ENST00000600804 PLEKHO1Q53GL0 409 aaPredicted RBP15.39■□□□□ 0.05
CHMP2A-207ENST00000600804 NGEFQ8N5V2 710 aa15.39■□□□□ 0.05
CHMP2A-207ENST00000600804 GAS2L2Q8NHY3 880 aa15.38■□□□□ 0.05
CHMP2A-207ENST00000600804 SPG7Q9UQ90 795 aa15.38■□□□□ 0.05
CHMP2A-207ENST00000600804 CICQ96RK0 1608 aaPredicted RBP15.38■□□□□ 0.05
CHMP2A-207ENST00000600804 MAPK8IP3Q9UPT6 1336 aa15.38■□□□□ 0.05
CHMP2A-207ENST00000600804 PHACTR3Q96KR7 559 aa15.37■□□□□ 0.05
CHMP2A-207ENST00000600804 PCDH11XQ9BZA7 1347 aa15.37■□□□□ 0.05
CHMP2A-207ENST00000600804 PCDH11YQ9BZA8 1340 aa15.37■□□□□ 0.05
CHMP2A-207ENST00000600804 C4AP0C0L4 1744 aa15.37■□□□□ 0.05
CHMP2A-207ENST00000600804 MYH14Q7Z406 1995 aaKnown RBP15.36■□□□□ 0.05
CHMP2A-207ENST00000600804 GRIN3BO60391 1043 aa15.36■□□□□ 0.05
CHMP2A-207ENST00000600804 MPRIPQ6WCQ1 1025 aa15.36■□□□□ 0.05
CHMP2A-207ENST00000600804 DLG5Q8TDM6 1919 aa15.36■□□□□ 0.05
CHMP2A-207ENST00000600804 HTATSF1O43719 755 aaKnown RBP15.35■□□□□ 0.05
CHMP2A-207ENST00000600804 NFE2L2Q16236 605 aa15.35■□□□□ 0.05
CHMP2A-207ENST00000600804 MTHFSDQ2M296 383 aaKnown RBP15.35■□□□□ 0.05
CHMP2A-207ENST00000600804 ZNF831Q5JPB2 1677 aa15.35■□□□□ 0.05
CHMP2A-207ENST00000600804 VIRMAQ69YN4 1812 aaKnown RBP15.34■□□□□ 0.05
CHMP2A-207ENST00000600804 TMPOP42166 694 aaKnown RBP15.34■□□□□ 0.05
CHMP2A-207ENST00000600804 NKX1-1Q15270 411 aaPredicted RBP15.34■□□□□ 0.05
CHMP2A-207ENST00000600804 AKAP4Q5JQC9 854 aa15.34■□□□□ 0.05
CHMP2A-207ENST00000600804 CCDC146Q8IYE0 955 aa15.34■□□□□ 0.05
CHMP2A-207ENST00000600804 CD2APQ9Y5K6 639 aa15.34■□□□□ 0.05
CHMP2A-207ENST00000600804 ADAMTS7Q9UKP4 1686 aa15.34■□□□□ 0.05
CHMP2A-207ENST00000600804 APAF1O14727 1248 aa15.33■□□□□ 0.04
CHMP2A-207ENST00000600804 HSP90AB1P08238 724 aaKnown RBP15.33■□□□□ 0.04
CHMP2A-207ENST00000600804 CCDC27Q2M243 656 aa15.33■□□□□ 0.04
CHMP2A-207ENST00000600804 IFNL2Q8IZJ0 200 aa15.33■□□□□ 0.04
CHMP2A-207ENST00000600804 WWC3Q9ULE0 1092 aa15.33■□□□□ 0.04
CHMP2A-207ENST00000600804 PHKG2P15735 406 aa15.32■□□□□ 0.04
CHMP2A-207ENST00000600804 ZNF530Q6P9A1 599 aaPredicted RBP15.32■□□□□ 0.04
CHMP2A-207ENST00000600804 LINC00116Q8NCU8 138 aa15.32■□□□□ 0.04
CHMP2A-207ENST00000600804 PIGBQ92521 554 aa15.32■□□□□ 0.04
CHMP2A-207ENST00000600804 ARFGEF1Q9Y6D6 1849 aa15.31■□□□□ 0.04
CHMP2A-207ENST00000600804 LMOD3Q0VAK6 560 aa15.31■□□□□ 0.04
CHMP2A-207ENST00000600804 C1orf141Q5JVX7 400 aa15.31■□□□□ 0.04
CHMP2A-207ENST00000600804 SCN11AQ9UI33 1791 aa15.31■□□□□ 0.04
CHMP2A-207ENST00000600804 GNAT3A8MTJ3 354 aa15.3■□□□□ 0.04
CHMP2A-207ENST00000600804 PHF14O94880 888 aa15.3■□□□□ 0.04
CHMP2A-207ENST00000600804 ITPK1Q13572 414 aa15.3■□□□□ 0.04
CHMP2A-207ENST00000600804 IFFO2Q5TF58 517 aa15.3■□□□□ 0.04
CHMP2A-207ENST00000600804 FLAD1Q8NFF5 587 aa15.3■□□□□ 0.04
CHMP2A-207ENST00000600804 CEMIPQ8WUJ3 1361 aa15.29■□□□□ 0.04
CHMP2A-207ENST00000600804 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.29■□□□□ 0.04
CHMP2A-207ENST00000600804 RIPK4P57078 832 aa15.29■□□□□ 0.04
CHMP2A-207ENST00000600804 DCAF5Q96JK2 942 aa15.29■□□□□ 0.04
CHMP2A-207ENST00000600804 TJP1Q07157 1748 aa15.29■□□□□ 0.04
CHMP2A-207ENST00000600804 PXDNLA1KZ92 1463 aa15.28■□□□□ 0.04
CHMP2A-207ENST00000600804 ZNF526Q8TF50 670 aaPredicted RBP15.28■□□□□ 0.04
CHMP2A-207ENST00000600804 AK7Q96M32 723 aa15.28■□□□□ 0.04
CHMP2A-207ENST00000600804 TRIM35Q9UPQ4 493 aa15.28■□□□□ 0.04
CHMP2A-207ENST00000600804 MRC1P22897 1456 aa15.27■□□□□ 0.04
CHMP2A-207ENST00000600804 SBF1O95248 1867 aa15.27■□□□□ 0.04
CHMP2A-207ENST00000600804 SMARCC1Q92922 1105 aaPredicted RBP15.27■□□□□ 0.04
CHMP2A-207ENST00000600804 GPBP1L1Q9HC44 474 aaPredicted RBP15.27■□□□□ 0.04
CHMP2A-207ENST00000600804 KDM6AO15550 1401 aaPredicted RBP15.26■□□□□ 0.03
CHMP2A-207ENST00000600804 ZNF521Q96K83 1311 aa15.26■□□□□ 0.03
CHMP2A-207ENST00000600804 LOC102724428A0A0B4J2F2 783 aa15.26■□□□□ 0.03
CHMP2A-207ENST00000600804 ERVV-2B6SEH9 535 aa15.26■□□□□ 0.03
CHMP2A-207ENST00000600804 SSFA2P28290 1259 aa15.26■□□□□ 0.03
CHMP2A-207ENST00000600804 SIK1P57059 783 aa15.26■□□□□ 0.03
CHMP2A-207ENST00000600804 RTF1Q92541 710 aaKnown RBP15.26■□□□□ 0.03
CHMP2A-207ENST00000600804 ASAP1Q9ULH1 1129 aa15.26■□□□□ 0.03
CHMP2A-207ENST00000600804 PCNTO95613 3336 aa15.25■□□□□ 0.03
CHMP2A-207ENST00000600804 KIF3CO14782 793 aa15.25■□□□□ 0.03
CHMP2A-207ENST00000600804 RNMTO43148 476 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms