RNA–Protein interactions for RNA: ENST00000582583.4

CCDC144NL-AS1-216, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene CCDC144NL-AS1, Length 1,670 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-216ENST00000582583 TMOD3Q9NYL9 352 aa16.31■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 U3KPZ7 1027 aaPredicted RBP16.31■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 MYCNP04198 464 aaPredicted RBP16.3■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 VIRMAQ69YN4 1812 aaKnown RBP16.3■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 ADAMTS7Q9UKP4 1686 aa16.3■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 CABP4P57796 275 aa16.3■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 EN1Q05925 392 aaPredicted RBP16.3■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 PIGBQ92521 554 aa16.3■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 RTF1Q92541 710 aaKnown RBP16.3■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 PLSCR1O15162 318 aa16.29■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 FAM9BQ8IZU0 186 aa16.29■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 DLG5Q8TDM6 1919 aa16.28■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 TMPOP42166 694 aaKnown RBP16.28■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 IL17REQ8NFR9 667 aa16.28■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 RNF39Q9H2S5 420 aa16.28■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 MRC1P22897 1456 aa16.28■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 HTATSF1O43719 755 aaKnown RBP16.27■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 EZH2Q15910 746 aaKnown RBP16.27■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 NFATC2IPQ8NCF5 419 aa16.27■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 CAMKK2Q96RR4 588 aa16.27■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 SLC52A2Q9HAB3 445 aa16.27■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 RGPD3A6NKT7 1758 aaPredicted RBP16.27■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 RGPD4Q7Z3J3 1758 aa16.27■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 CEMIPQ8WUJ3 1361 aa16.27■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 RIPK4P57078 832 aa16.27■□□□□ 0.19
CCDC144NL-AS1-216ENST00000582583 MCM10Q7L590 875 aa16.27■□□□□ 0.19
CCDC144NL-AS1-216ENST00000582583 RRP7AQ9Y3A4 280 aaKnown RBP16.27■□□□□ 0.19
CCDC144NL-AS1-216ENST00000582583 TEFQ10587 303 aa16.26■□□□□ 0.19
CCDC144NL-AS1-216ENST00000582583 DCTN1Q14203 1278 aa16.26■□□□□ 0.19
CCDC144NL-AS1-216ENST00000582583 NEUROD2Q15784 382 aa16.26■□□□□ 0.19
CCDC144NL-AS1-216ENST00000582583 APAF1O14727 1248 aa16.25■□□□□ 0.19
CCDC144NL-AS1-216ENST00000582583 LMOD3Q0VAK6 560 aa16.24■□□□□ 0.19
CCDC144NL-AS1-216ENST00000582583 SMARCC1Q92922 1105 aaPredicted RBP16.24■□□□□ 0.19
CCDC144NL-AS1-216ENST00000582583 ASAP1Q9ULH1 1129 aa16.24■□□□□ 0.19
CCDC144NL-AS1-216ENST00000582583 PALLDQ8WX93 1383 aa16.24■□□□□ 0.19
CCDC144NL-AS1-216ENST00000582583 ATG3Q9NT62 314 aa16.24■□□□□ 0.19
CCDC144NL-AS1-216ENST00000582583 TXNRD1Q16881 649 aa16.23■□□□□ 0.19
CCDC144NL-AS1-216ENST00000582583 LY75O60449 1722 aa16.23■□□□□ 0.19
CCDC144NL-AS1-216ENST00000582583 RREB1Q92766 1687 aa16.22■□□□□ 0.19
CCDC144NL-AS1-216ENST00000582583 PROM2Q8N271 834 aa16.22■□□□□ 0.19
CCDC144NL-AS1-216ENST00000582583 SIPA1L3O60292 1781 aaPredicted RBP16.22■□□□□ 0.19
CCDC144NL-AS1-216ENST00000582583 HNRNPUQ00839 825 aaKnown RBP eCLIP16.21■□□□□ 0.19
CCDC144NL-AS1-216ENST00000582583 THUMPD2Q9BTF0 503 aaKnown RBP16.21■□□□□ 0.19
CCDC144NL-AS1-216ENST00000582583 NEFLP07196 543 aa16.21■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 TRIM35Q9UPQ4 493 aa16.21■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 SLC39A6Q13433 755 aa16.2■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 SLC27A3Q5K4L6 730 aa16.2■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 CCNL1Q9UK58 526 aaPredicted RBP16.2■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 NUP188Q5SRE5 1749 aa16.2■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 PAPPAQ13219 1627 aa16.2■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 SENP3-EIF4A1A0A087X0R7 540 aa16.19■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 BTBD11A6QL63 1104 aa16.19■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 LOC102724428A0A0B4J2F2 783 aa16.18■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 KCNQ4P56696 695 aa16.18■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 SIK1P57059 783 aa16.18■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 FKBP8Q14318 412 aa16.18■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 TAF7Q15545 349 aaPredicted RBP16.18■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 RBM42Q9BTD8 480 aaKnown RBP16.18■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 LRRC4BQ9NT99 713 aa16.18■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 PTCD1O75127 700 aaKnown RBP16.18■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 TTC5Q8N0Z6 440 aa16.18■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 ZNF790Q6PG37 636 aa16.17■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 ATP6V1AP38606 617 aa16.16■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 KCPQ6ZWJ8 1503 aa16.15■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 ZBED9Q6R2W3 1325 aa16.15■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 UBR2Q8IWV8 1755 aa16.15■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 CCDC27Q2M243 656 aa16.14■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 NBPF14Q5TI25 921 aa16.14■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 SLC4A9Q96Q91 983 aa16.14■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 MIS18AQ9NYP9 233 aa16.14■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 SALL2Q9Y467 1007 aaPredicted RBP16.14■□□□□ 0.18
CCDC144NL-AS1-216ENST00000582583 ZNF831Q5JPB2 1677 aa16.14■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 KCNQ3O43525 872 aa16.14■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 C5P01031 1676 aa16.14■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 HMGB2P26583 209 aaKnown RBP16.13■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 CALD1Q05682 793 aaKnown RBP16.13■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 ITPK1Q13572 414 aa16.13■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 WWC1Q8IX03 1113 aa16.13■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 NGEFQ8N5V2 710 aa16.13■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 ZNF496Q96IT1 587 aaPredicted RBP16.13■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 ANO8Q9HCE9 1232 aaPredicted RBP16.13■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 TSPYL4Q9UJ04 414 aa16.13■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 TAF1LQ8IZX4 1826 aa16.13■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 KDM3BQ7LBC6 1761 aa16.12■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 FMNL2Q96PY5 1086 aa16.12■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 BABAM1Q9NWV8 329 aa16.12■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 LAS1LQ9Y4W2 734 aaKnown RBP16.12■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 VSIG10Q8N0Z9 540 aa16.11■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 STK32BQ9NY57 414 aa16.11■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 TJP1Q07157 1748 aa16.11■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 CICQ96RK0 1608 aaPredicted RBP16.11■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 HEG1Q9ULI3 1381 aa16.11■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 C1QBPQ07021 282 aaKnown RBP16.11■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 LINC00116Q8NCU8 138 aa16.11■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 C4BP0C0L5 1744 aa16.1■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 CHL1O00533 1208 aa16.1■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 SLC15A2Q16348 729 aa16.1■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 ZNF827Q17R98 1081 aa16.1■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 SAMD1Q6SPF0 538 aaPredicted RBP16.1■□□□□ 0.17
CCDC144NL-AS1-216ENST00000582583 DNAJC10Q8IXB1 793 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms