RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 NOL7Q9UMY1 257 aaKnown RBP21.28■■□□□ 1
SCARF1-205ENST00000571272 XPCQ01831 940 aaPredicted RBP21.27■■□□□ 1
SCARF1-205ENST00000571272 FKBP5Q13451 457 aaPredicted RBP21.27■■□□□ 1
SCARF1-205ENST00000571272 UPF3BQ9BZI7 483 aaKnown RBP21.27■■□□□ 1
SCARF1-205ENST00000571272 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.27■■□□□ 1
SCARF1-205ENST00000571272 CYB5RLQ6IPT4 315 aa21.27■■□□□ 1
SCARF1-205ENST00000571272 STK31Q9BXU1 1019 aa21.27■■□□□ 1
SCARF1-205ENST00000571272 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.26■□□□□ 0.99
SCARF1-205ENST00000571272 R3HCC1Q9Y3T6 440 aaKnown RBP21.26■□□□□ 0.99
SCARF1-205ENST00000571272 SPATA31D1Q6ZQQ2 1576 aa21.26■□□□□ 0.99
SCARF1-205ENST00000571272 NRKQ7Z2Y5 1582 aa21.26■□□□□ 0.99
SCARF1-205ENST00000571272 ROBO2Q9HCK4 1378 aa21.26■□□□□ 0.99
SCARF1-205ENST00000571272 ITSN1Q15811 1721 aa21.26■□□□□ 0.99
SCARF1-205ENST00000571272 BRD1O95696 1058 aa21.26■□□□□ 0.99
SCARF1-205ENST00000571272 MCCP23508 829 aa21.26■□□□□ 0.99
SCARF1-205ENST00000571272 CHMLP26374 656 aa21.26■□□□□ 0.99
SCARF1-205ENST00000571272 HS1BP3Q53T59 392 aa21.26■□□□□ 0.99
SCARF1-205ENST00000571272 PPP6R1Q9UPN7 881 aa21.26■□□□□ 0.99
SCARF1-205ENST00000571272 SALL3Q9BXA9 1300 aa21.25■□□□□ 0.99
SCARF1-205ENST00000571272 UNC5CLQ8IV45 518 aa21.25■□□□□ 0.99
SCARF1-205ENST00000571272 AKAP12Q02952 1782 aa21.25■□□□□ 0.99
SCARF1-205ENST00000571272 GDPD2Q9HCC8 539 aa21.25■□□□□ 0.99
SCARF1-205ENST00000571272 FLIIQ13045 1269 aa21.24■□□□□ 0.99
SCARF1-205ENST00000571272 MCM2P49736 904 aa21.24■□□□□ 0.99
SCARF1-205ENST00000571272 OVOS2A0A0J9YW53 1432 aa21.24■□□□□ 0.99
SCARF1-205ENST00000571272 OVOS2Q6IE36 1432 aa21.24■□□□□ 0.99
SCARF1-205ENST00000571272 SIRT1Q96EB6 747 aa21.23■□□□□ 0.99
SCARF1-205ENST00000571272 MBD3O95983 291 aa21.23■□□□□ 0.99
SCARF1-205ENST00000571272 CUL4AQ13619 759 aa21.23■□□□□ 0.99
SCARF1-205ENST00000571272 IL1RAPL2Q9NP60 686 aa21.22■□□□□ 0.99
SCARF1-205ENST00000571272 LRRFIP2Q9Y608 721 aaKnown RBP21.22■□□□□ 0.99
SCARF1-205ENST00000571272 PEAK1Q9H792 1746 aa21.22■□□□□ 0.99
SCARF1-205ENST00000571272 RBM10P98175 930 aaKnown RBP21.22■□□□□ 0.99
SCARF1-205ENST00000571272 ESF1Q9H501 851 aaKnown RBP21.22■□□□□ 0.99
SCARF1-205ENST00000571272 GNAI3P08754 354 aa21.22■□□□□ 0.99
SCARF1-205ENST00000571272 ATP8B2P98198 1209 aa21.22■□□□□ 0.99
SCARF1-205ENST00000571272 IL25Q9H293 177 aa21.22■□□□□ 0.99
SCARF1-205ENST00000571272 TPRNQ4KMQ1 711 aa21.21■□□□□ 0.99
SCARF1-205ENST00000571272 ZKSCAN5Q9Y2L8 839 aa21.21■□□□□ 0.99
SCARF1-205ENST00000571272 ZNF500O60304 480 aaPredicted RBP21.2■□□□□ 0.98
SCARF1-205ENST00000571272 TECPR2O15040 1411 aa21.2■□□□□ 0.98
SCARF1-205ENST00000571272 RIMS1Q86UR5 1692 aaKnown RBP21.2■□□□□ 0.98
SCARF1-205ENST00000571272 MAP4K4O95819 1239 aaPredicted RBP21.2■□□□□ 0.98
SCARF1-205ENST00000571272 HDGFP51858 240 aaKnown RBP21.2■□□□□ 0.98
SCARF1-205ENST00000571272 EYA1Q99502 592 aa21.2■□□□□ 0.98
SCARF1-205ENST00000571272 GADD45BO75293 160 aaPredicted RBP21.19■□□□□ 0.98
SCARF1-205ENST00000571272 USP6P35125 1406 aa21.19■□□□□ 0.98
SCARF1-205ENST00000571272 PLEKHG3A1L390 1219 aa21.19■□□□□ 0.98
SCARF1-205ENST00000571272 AMPHP49418 695 aa21.19■□□□□ 0.98
SCARF1-205ENST00000571272 NUTM1Q86Y26 1132 aa21.19■□□□□ 0.98
SCARF1-205ENST00000571272 ANAPC15P60006 121 aa21.19■□□□□ 0.98
SCARF1-205ENST00000571272 CCDC30Q5VVM6 783 aa21.19■□□□□ 0.98
SCARF1-205ENST00000571272 INTS4Q96HW7 963 aaKnown RBP21.18■□□□□ 0.98
SCARF1-205ENST00000571272 ARHGEF10O15013 1369 aa21.17■□□□□ 0.98
SCARF1-205ENST00000571272 TSPY26PQ9H489 355 aa21.17■□□□□ 0.98
SCARF1-205ENST00000571272 TSPOAP1O95153 1857 aa21.17■□□□□ 0.98
SCARF1-205ENST00000571272 PDCL3Q9H2J4 239 aa21.16■□□□□ 0.98
SCARF1-205ENST00000571272 MPNDQ8N594 471 aa21.16■□□□□ 0.98
SCARF1-205ENST00000571272 CCDC39Q9UFE4 941 aa21.16■□□□□ 0.98
SCARF1-205ENST00000571272 STAP2Q9UGK3 403 aa21.16■□□□□ 0.98
SCARF1-205ENST00000571272 USP31Q70CQ4 1352 aa21.16■□□□□ 0.98
SCARF1-205ENST00000571272 USP48Q86UV5 1035 aa21.15■□□□□ 0.98
SCARF1-205ENST00000571272 LARP6Q9BRS8 491 aaKnown RBP21.15■□□□□ 0.98
SCARF1-205ENST00000571272 USP44Q9H0E7 712 aa21.15■□□□□ 0.98
SCARF1-205ENST00000571272 FAM13BQ9NYF5 915 aa21.15■□□□□ 0.98
SCARF1-205ENST00000571272 AGLP35573 1532 aa21.15■□□□□ 0.98
SCARF1-205ENST00000571272 RGPD1P0DJD0 1748 aa21.15■□□□□ 0.98
SCARF1-205ENST00000571272 ZBTB7CA1YPR0 619 aa21.15■□□□□ 0.98
SCARF1-205ENST00000571272 PTMAP06454 111 aaKnown RBP21.15■□□□□ 0.98
SCARF1-205ENST00000571272 ZMYND15Q9H091 742 aa21.15■□□□□ 0.98
SCARF1-205ENST00000571272 UBTFL1P0CB47 393 aaPredicted RBP21.14■□□□□ 0.97
SCARF1-205ENST00000571272 SRCIN1Q9C0H9 1055 aa21.14■□□□□ 0.97
SCARF1-205ENST00000571272 SYAP1Q96A49 352 aaPredicted RBP21.14■□□□□ 0.97
SCARF1-205ENST00000571272 SLC26A8Q96RN1 970 aa21.14■□□□□ 0.97
SCARF1-205ENST00000571272 FLT4P35916 1363 aa21.13■□□□□ 0.97
SCARF1-205ENST00000571272 CEP170BQ9Y4F5 1589 aaPredicted RBP21.12■□□□□ 0.97
SCARF1-205ENST00000571272 UQCRHLA0A096LP55 91 aa21.12■□□□□ 0.97
SCARF1-205ENST00000571272 SURF6O75683 361 aaKnown RBP21.12■□□□□ 0.97
SCARF1-205ENST00000571272 UQCRHP07919 91 aa21.12■□□□□ 0.97
SCARF1-205ENST00000571272 TERF1P54274 439 aa21.12■□□□□ 0.97
SCARF1-205ENST00000571272 NGDNQ8NEJ9 315 aaKnown RBP21.12■□□□□ 0.97
SCARF1-205ENST00000571272 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.12■□□□□ 0.97
SCARF1-205ENST00000571272 GNAT3A8MTJ3 354 aa21.12■□□□□ 0.97
SCARF1-205ENST00000571272 PHAXQ9H814 394 aaKnown RBP21.12■□□□□ 0.97
SCARF1-205ENST00000571272 WDR33Q9C0J8 1336 aaKnown RBP21.12■□□□□ 0.97
SCARF1-205ENST00000571272 HSPA4P34932 840 aa21.11■□□□□ 0.97
SCARF1-205ENST00000571272 NUTM2GQ5VZR2 741 aa21.11■□□□□ 0.97
SCARF1-205ENST00000571272 SBNO1A3KN83 1393 aa21.11■□□□□ 0.97
SCARF1-205ENST00000571272 KDRP35968 1356 aa21.11■□□□□ 0.97
SCARF1-205ENST00000571272 IGSF1Q8N6C5 1336 aa21.11■□□□□ 0.97
SCARF1-205ENST00000571272 LTV1Q96GA3 475 aaPredicted RBP21.11■□□□□ 0.97
SCARF1-205ENST00000571272 SSH2Q76I76 1423 aa21.11■□□□□ 0.97
SCARF1-205ENST00000571272 DTNBO60941 627 aa21.11■□□□□ 0.97
SCARF1-205ENST00000571272 PPP1R42Q7Z4L9 355 aa21.11■□□□□ 0.97
SCARF1-205ENST00000571272 IL17REQ8NFR9 667 aa21.11■□□□□ 0.97
SCARF1-205ENST00000571272 TMEM2Q9UHN6 1383 aa21.1■□□□□ 0.97
SCARF1-205ENST00000571272 SOS1Q07889 1333 aaPredicted RBP21.1■□□□□ 0.97
SCARF1-205ENST00000571272 TCHHQ07283 1943 aa21.1■□□□□ 0.97
SCARF1-205ENST00000571272 MCM5P33992 734 aa21.1■□□□□ 0.97
SCARF1-205ENST00000571272 LTKP29376 864 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms