RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 KCNQ4P56696 695 aa21.99■■□□□ 1.11
CNEP1R1-210ENST00000568890 ATG3Q9NT62 314 aa21.99■■□□□ 1.11
CNEP1R1-210ENST00000568890 HTATSF1O43719 755 aaKnown RBP21.98■■□□□ 1.11
CNEP1R1-210ENST00000568890 LRRC4BQ9NT99 713 aa21.98■■□□□ 1.11
CNEP1R1-210ENST00000568890 SLC39A6Q13433 755 aa21.97■■□□□ 1.11
CNEP1R1-210ENST00000568890 RTF1Q92541 710 aaKnown RBP21.96■■□□□ 1.11
CNEP1R1-210ENST00000568890 ADAMTS7Q9UKP4 1686 aa21.96■■□□□ 1.11
CNEP1R1-210ENST00000568890 TXNRD1Q16881 649 aa21.96■■□□□ 1.11
CNEP1R1-210ENST00000568890 BTAF1O14981 1849 aa21.95■■□□□ 1.1
CNEP1R1-210ENST00000568890 ITGB4P16144 1822 aa21.95■■□□□ 1.1
CNEP1R1-210ENST00000568890 SRCAPQ6ZRS2 3230 aa21.95■■□□□ 1.1
CNEP1R1-210ENST00000568890 SLC4A9Q96Q91 983 aa21.94■■□□□ 1.1
CNEP1R1-210ENST00000568890 KCNQ3O43525 872 aa21.94■■□□□ 1.1
CNEP1R1-210ENST00000568890 MIS18AQ9NYP9 233 aa21.94■■□□□ 1.1
CNEP1R1-210ENST00000568890 SCN11AQ9UI33 1791 aa21.93■■□□□ 1.1
CNEP1R1-210ENST00000568890 TEFQ10587 303 aa21.93■■□□□ 1.1
CNEP1R1-210ENST00000568890 PALLDQ8WX93 1383 aa21.92■■□□□ 1.1
CNEP1R1-210ENST00000568890 MRC1P22897 1456 aa21.92■■□□□ 1.1
CNEP1R1-210ENST00000568890 SALL2Q9Y467 1007 aaPredicted RBP21.91■■□□□ 1.1
CNEP1R1-210ENST00000568890 DLG5Q8TDM6 1919 aa21.91■■□□□ 1.1
CNEP1R1-210ENST00000568890 PTCD1O75127 700 aaKnown RBP21.9■■□□□ 1.1
CNEP1R1-210ENST00000568890 TAF7Q15545 349 aaPredicted RBP21.89■■□□□ 1.09
CNEP1R1-210ENST00000568890 LOC102724428A0A0B4J2F2 783 aa21.88■■□□□ 1.09
CNEP1R1-210ENST00000568890 BTBD11A6QL63 1104 aa21.88■■□□□ 1.09
CNEP1R1-210ENST00000568890 SIK1P57059 783 aa21.88■■□□□ 1.09
CNEP1R1-210ENST00000568890 ZNF790Q6PG37 636 aa21.88■■□□□ 1.09
CNEP1R1-210ENST00000568890 SMARCC1Q92922 1105 aaPredicted RBP21.88■■□□□ 1.09
CNEP1R1-210ENST00000568890 ITPK1Q13572 414 aa21.87■■□□□ 1.09
CNEP1R1-210ENST00000568890 RBM42Q9BTD8 480 aaKnown RBP21.87■■□□□ 1.09
CNEP1R1-210ENST00000568890 CCNL1Q9UK58 526 aaPredicted RBP21.87■■□□□ 1.09
CNEP1R1-210ENST00000568890 WWC1Q8IX03 1113 aa21.87■■□□□ 1.09
CNEP1R1-210ENST00000568890 ZNF496Q96IT1 587 aaPredicted RBP21.86■■□□□ 1.09
CNEP1R1-210ENST00000568890 ANO8Q9HCE9 1232 aaPredicted RBP21.86■■□□□ 1.09
CNEP1R1-210ENST00000568890 SLC27A3Q5K4L6 730 aa21.85■■□□□ 1.09
CNEP1R1-210ENST00000568890 LMOD3Q0VAK6 560 aa21.85■■□□□ 1.09
CNEP1R1-210ENST00000568890 VIRMAQ69YN4 1812 aaKnown RBP21.84■■□□□ 1.09
CNEP1R1-210ENST00000568890 ATP6V1AP38606 617 aa21.84■■□□□ 1.09
CNEP1R1-210ENST00000568890 CCDC27Q2M243 656 aa21.83■■□□□ 1.09
CNEP1R1-210ENST00000568890 LINC00116Q8NCU8 138 aa21.82■■□□□ 1.08
CNEP1R1-210ENST00000568890 SIPA1L3O60292 1781 aaPredicted RBP21.82■■□□□ 1.08
CNEP1R1-210ENST00000568890 PRAMEF22A3QJZ6 481 aa21.81■■□□□ 1.08
CNEP1R1-210ENST00000568890 CHL1O00533 1208 aa21.81■■□□□ 1.08
CNEP1R1-210ENST00000568890 ZNF827Q17R98 1081 aa21.81■■□□□ 1.08
CNEP1R1-210ENST00000568890 LY75O60449 1722 aa21.81■■□□□ 1.08
CNEP1R1-210ENST00000568890 ZNF853P0CG23 659 aa21.81■■□□□ 1.08
CNEP1R1-210ENST00000568890 NCBP3Q53F19 620 aaKnown RBP21.81■■□□□ 1.08
CNEP1R1-210ENST00000568890 KCPQ6ZWJ8 1503 aa21.81■■□□□ 1.08
CNEP1R1-210ENST00000568890 SMIM5Q71RC9 77 aa21.8■■□□□ 1.08
CNEP1R1-210ENST00000568890 AMIGO3Q86WK7 504 aa21.8■■□□□ 1.08
CNEP1R1-210ENST00000568890 LAS1LQ9Y4W2 734 aaKnown RBP21.8■■□□□ 1.08
CNEP1R1-210ENST00000568890 DNAJC10Q8IXB1 793 aa21.79■■□□□ 1.08
CNEP1R1-210ENST00000568890 TTC5Q8N0Z6 440 aa21.79■■□□□ 1.08
CNEP1R1-210ENST00000568890 AKT1S1Q96B36 256 aa21.79■■□□□ 1.08
CNEP1R1-210ENST00000568890 SPINK5Q9NQ38 1064 aaPredicted RBP21.79■■□□□ 1.08
CNEP1R1-210ENST00000568890 RGPD3A6NKT7 1758 aaPredicted RBP21.79■■□□□ 1.08
CNEP1R1-210ENST00000568890 RGPD4Q7Z3J3 1758 aa21.79■■□□□ 1.08
CNEP1R1-210ENST00000568890 EIF4A1P60842 406 aaKnown RBP21.78■■□□□ 1.08
CNEP1R1-210ENST00000568890 CFAP44Q96MT7 982 aa21.78■■□□□ 1.08
CNEP1R1-210ENST00000568890 PDGFDQ9GZP0 370 aaPredicted RBP21.78■■□□□ 1.08
CNEP1R1-210ENST00000568890 TSPYL4Q9UJ04 414 aa21.78■■□□□ 1.08
CNEP1R1-210ENST00000568890 RREB1Q92766 1687 aa21.78■■□□□ 1.08
CNEP1R1-210ENST00000568890 ZNF521Q96K83 1311 aa21.77■■□□□ 1.08
CNEP1R1-210ENST00000568890 KRT24Q2M2I5 525 aa21.77■■□□□ 1.08
CNEP1R1-210ENST00000568890 PAPPAQ13219 1627 aa21.77■■□□□ 1.07
CNEP1R1-210ENST00000568890 R3HDM1Q15032 1099 aaKnown RBP21.76■■□□□ 1.07
CNEP1R1-210ENST00000568890 SLC15A2Q16348 729 aa21.76■■□□□ 1.07
CNEP1R1-210ENST00000568890 FMNL2Q96PY5 1086 aa21.76■■□□□ 1.07
CNEP1R1-210ENST00000568890 MBIPQ9NS73 344 aa21.76■■□□□ 1.07
CNEP1R1-210ENST00000568890 USP16Q9Y5T5 823 aa21.76■■□□□ 1.07
CNEP1R1-210ENST00000568890 HEG1Q9ULI3 1381 aa21.76■■□□□ 1.07
CNEP1R1-210ENST00000568890 PSDA5PKW4 1024 aaPredicted RBP21.76■■□□□ 1.07
CNEP1R1-210ENST00000568890 NUP188Q5SRE5 1749 aa21.75■■□□□ 1.07
CNEP1R1-210ENST00000568890 VSIG10Q8N0Z9 540 aa21.75■■□□□ 1.07
CNEP1R1-210ENST00000568890 BABAM1Q9NWV8 329 aa21.75■■□□□ 1.07
CNEP1R1-210ENST00000568890 CYP19A1P11511 503 aaPredicted RBP21.74■■□□□ 1.07
CNEP1R1-210ENST00000568890 IFT57Q9NWB7 429 aa21.74■■□□□ 1.07
CNEP1R1-210ENST00000568890 GIGYF1O75420 1035 aaPredicted RBP21.73■■□□□ 1.07
CNEP1R1-210ENST00000568890 NBPF14Q5TI25 921 aa21.73■■□□□ 1.07
CNEP1R1-210ENST00000568890 INTS5Q6P9B9 1019 aaKnown RBP21.73■■□□□ 1.07
CNEP1R1-210ENST00000568890 WDR63Q8IWG1 891 aa21.72■■□□□ 1.07
CNEP1R1-210ENST00000568890 TSR2Q969E8 191 aaKnown RBP21.72■■□□□ 1.07
CNEP1R1-210ENST00000568890 CRKLP46109 303 aaKnown RBP21.72■■□□□ 1.07
CNEP1R1-210ENST00000568890 NGEFQ8N5V2 710 aa21.72■■□□□ 1.07
CNEP1R1-210ENST00000568890 UBR2Q8IWV8 1755 aa21.72■■□□□ 1.07
CNEP1R1-210ENST00000568890 SNRPA1P09661 255 aaKnown RBP21.71■■□□□ 1.07
CNEP1R1-210ENST00000568890 GNAI1P63096 354 aa21.71■■□□□ 1.07
CNEP1R1-210ENST00000568890 STK32BQ9NY57 414 aa21.7■■□□□ 1.07
CNEP1R1-210ENST00000568890 TFCP2L1Q9NZI6 479 aa21.7■■□□□ 1.07
CNEP1R1-210ENST00000568890 A1BGP04217 495 aa21.7■■□□□ 1.06
CNEP1R1-210ENST00000568890 CALD1Q05682 793 aaKnown RBP21.7■■□□□ 1.06
CNEP1R1-210ENST00000568890 RC3H1Q5TC82 1133 aaKnown RBP21.69■■□□□ 1.06
CNEP1R1-210ENST00000568890 IL16Q14005 1332 aa21.69■■□□□ 1.06
CNEP1R1-210ENST00000568890 PIP4K2AP48426 406 aaPredicted RBP21.68■■□□□ 1.06
CNEP1R1-210ENST00000568890 CDCA7LQ96GN5 454 aa21.68■■□□□ 1.06
CNEP1R1-210ENST00000568890 KDM3BQ7LBC6 1761 aa21.68■■□□□ 1.06
CNEP1R1-210ENST00000568890 PNPLA7Q6ZV29 1317 aa21.68■■□□□ 1.06
CNEP1R1-210ENST00000568890 GNPATO15228 680 aa21.68■■□□□ 1.06
CNEP1R1-210ENST00000568890 C8orf58Q8NAV2 365 aa21.68■■□□□ 1.06
CNEP1R1-210ENST00000568890 TAF1LQ8IZX4 1826 aa21.68■■□□□ 1.06
CNEP1R1-210ENST00000568890 TJP1Q07157 1748 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms