RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 CRACR2BQ8N4Y2 399 aaPredicted RBP15.94■□□□□ 0.14
CX3CL1-204ENST00000565912 PLB1Q6P1J6 1458 aa15.94■□□□□ 0.14
CX3CL1-204ENST00000565912 MINDY4BA8MYZ0 360 aa15.93■□□□□ 0.14
CX3CL1-204ENST00000565912 SCLT1Q96NL6 688 aa15.93■□□□□ 0.14
CX3CL1-204ENST00000565912 PCF11O94913 1555 aaKnown RBP15.93■□□□□ 0.14
CX3CL1-204ENST00000565912 MAGI1Q96QZ7 1491 aaPredicted RBP15.93■□□□□ 0.14
CX3CL1-204ENST00000565912 ERBINQ96RT1 1412 aa15.93■□□□□ 0.14
CX3CL1-204ENST00000565912 SMTNL1A8MU46 457 aa15.93■□□□□ 0.14
CX3CL1-204ENST00000565912 GNAT3A8MTJ3 354 aa15.93■□□□□ 0.14
CX3CL1-204ENST00000565912 SEC63Q9UGP8 760 aaKnown RBP15.93■□□□□ 0.14
CX3CL1-204ENST00000565912 CEP131Q9UPN4 1083 aa15.93■□□□□ 0.14
CX3CL1-204ENST00000565912 JAKMIP3Q5VZ66 844 aa15.93■□□□□ 0.14
CX3CL1-204ENST00000565912 EXOC6BQ9Y2D4 811 aa15.93■□□□□ 0.14
CX3CL1-204ENST00000565912 GRIN2AQ12879 1464 aa15.93■□□□□ 0.14
CX3CL1-204ENST00000565912 TAF3Q5VWG9 929 aa15.92■□□□□ 0.14
CX3CL1-204ENST00000565912 POTEJP0CG39 1038 aa15.92■□□□□ 0.14
CX3CL1-204ENST00000565912 GRPEL1Q9HAV7 217 aa15.92■□□□□ 0.14
CX3CL1-204ENST00000565912 MKNK2Q9HBH9 465 aa15.92■□□□□ 0.14
CX3CL1-204ENST00000565912 TNIP1Q15025 636 aa15.92■□□□□ 0.14
CX3CL1-204ENST00000565912 RPAP2Q8IXW5 612 aaPredicted RBP15.92■□□□□ 0.14
CX3CL1-204ENST00000565912 TRIM21P19474 475 aaKnown RBP15.92■□□□□ 0.14
CX3CL1-204ENST00000565912 CFAP100Q494V2 611 aa15.92■□□□□ 0.14
CX3CL1-204ENST00000565912 PPP1R12BO60237 982 aaPredicted RBP15.91■□□□□ 0.14
CX3CL1-204ENST00000565912 ARHGAP29Q52LW3 1261 aa15.91■□□□□ 0.14
CX3CL1-204ENST00000565912 CAVIN4Q5BKX8 364 aa15.91■□□□□ 0.14
CX3CL1-204ENST00000565912 ZNF287Q9HBT7 754 aa15.91■□□□□ 0.14
CX3CL1-204ENST00000565912 AKNAQ7Z591 1439 aa15.91■□□□□ 0.14
CX3CL1-204ENST00000565912 CAMK4Q16566 473 aa15.91■□□□□ 0.14
CX3CL1-204ENST00000565912 ZPR1O75312 459 aa15.9■□□□□ 0.14
CX3CL1-204ENST00000565912 FERMT3Q86UX7 667 aa15.9■□□□□ 0.14
CX3CL1-204ENST00000565912 ZNF397Q8NF99 534 aaPredicted RBP15.9■□□□□ 0.14
CX3CL1-204ENST00000565912 URB2Q14146 1524 aaKnown RBP15.9■□□□□ 0.14
CX3CL1-204ENST00000565912 FCHSD2O94868 740 aa15.9■□□□□ 0.14
CX3CL1-204ENST00000565912 CCDC102AQ96A19 550 aa15.9■□□□□ 0.14
CX3CL1-204ENST00000565912 AKAP2Q9Y2D5 859 aa15.9■□□□□ 0.14
CX3CL1-204ENST00000565912 ZNF652Q9Y2D9 606 aa15.9■□□□□ 0.14
CX3CL1-204ENST00000565912 ANKIB1Q9P2G1 1089 aa15.9■□□□□ 0.14
CX3CL1-204ENST00000565912 NFE2L2Q16236 605 aa15.89■□□□□ 0.13
CX3CL1-204ENST00000565912 TMOD3Q9NYL9 352 aa15.89■□□□□ 0.13
CX3CL1-204ENST00000565912 ANKRD30BQ9BXX2 1392 aa15.89■□□□□ 0.13
CX3CL1-204ENST00000565912 IFIT1P09914 478 aaKnown RBP15.89■□□□□ 0.13
CX3CL1-204ENST00000565912 CCDC83Q8IWF9 413 aa15.89■□□□□ 0.13
CX3CL1-204ENST00000565912 U3KPZ7 1027 aaPredicted RBP15.89■□□□□ 0.13
CX3CL1-204ENST00000565912 TMEM57Q8N5G2 664 aa15.89■□□□□ 0.13
CX3CL1-204ENST00000565912 UBA5Q9GZZ9 404 aa15.89■□□□□ 0.13
CX3CL1-204ENST00000565912 CD109Q6YHK3 1445 aa15.89■□□□□ 0.13
CX3CL1-204ENST00000565912 PRPF40BQ6NWY9 871 aaKnown RBP15.89■□□□□ 0.13
CX3CL1-204ENST00000565912 MCM10Q7L590 875 aa15.89■□□□□ 0.13
CX3CL1-204ENST00000565912 MYD88Q99836 296 aa15.89■□□□□ 0.13
CX3CL1-204ENST00000565912 CETN2P41208 172 aa15.88■□□□□ 0.13
CX3CL1-204ENST00000565912 MAP3K11Q16584 847 aa15.88■□□□□ 0.13
CX3CL1-204ENST00000565912 DUSP27Q5VZP5 1158 aa15.88■□□□□ 0.13
CX3CL1-204ENST00000565912 BACH2Q9BYV9 841 aa15.88■□□□□ 0.13
CX3CL1-204ENST00000565912 PPP4R3AQ6IN85 833 aa15.88■□□□□ 0.13
CX3CL1-204ENST00000565912 BOLA2Q9H3K6 86 aa15.88■□□□□ 0.13
CX3CL1-204ENST00000565912 CCDC141Q6ZP82 1450 aa15.88■□□□□ 0.13
CX3CL1-204ENST00000565912 DZIP1Q86YF9 867 aaKnown RBP15.88■□□□□ 0.13
CX3CL1-204ENST00000565912 KIF1BPQ96EK5 621 aa15.88■□□□□ 0.13
CX3CL1-204ENST00000565912 KLHL10Q6JEL2 608 aa15.87■□□□□ 0.13
CX3CL1-204ENST00000565912 CCDC148Q8NFR7 591 aa15.87■□□□□ 0.13
CX3CL1-204ENST00000565912 NAPBQ9H115 298 aa15.87■□□□□ 0.13
CX3CL1-204ENST00000565912 NUDT16Q96DE0 195 aaKnown RBP15.87■□□□□ 0.13
CX3CL1-204ENST00000565912 THUMPD2Q9BTF0 503 aaKnown RBP15.87■□□□□ 0.13
CX3CL1-204ENST00000565912 RPGRIP1LQ68CZ1 1315 aa15.87■□□□□ 0.13
CX3CL1-204ENST00000565912 SMARCA5O60264 1052 aaPredicted RBP15.87■□□□□ 0.13
CX3CL1-204ENST00000565912 WDR78Q5VTH9 848 aa15.87■□□□□ 0.13
CX3CL1-204ENST00000565912 CAMSAP2Q08AD1 1489 aa15.87■□□□□ 0.13
CX3CL1-204ENST00000565912 POGZQ7Z3K3 1410 aa15.87■□□□□ 0.13
CX3CL1-204ENST00000565912 CCDC96Q2M329 555 aa15.87■□□□□ 0.13
CX3CL1-204ENST00000565912 CCDC82Q8N4S0 544 aa15.87■□□□□ 0.13
CX3CL1-204ENST00000565912 SPA17Q15506 151 aa15.87■□□□□ 0.13
CX3CL1-204ENST00000565912 KCNH5Q8NCM2 988 aa15.86■□□□□ 0.13
CX3CL1-204ENST00000565912 ATAD2Q6PL18 1390 aa15.86■□□□□ 0.13
CX3CL1-204ENST00000565912 MX1P20591 662 aa15.86■□□□□ 0.13
CX3CL1-204ENST00000565912 UQCRHLA0A096LP55 91 aa15.86■□□□□ 0.13
CX3CL1-204ENST00000565912 RANBP6O60518 1105 aaKnown RBP15.86■□□□□ 0.13
CX3CL1-204ENST00000565912 MYCNP04198 464 aaPredicted RBP15.86■□□□□ 0.13
CX3CL1-204ENST00000565912 UQCRHP07919 91 aa15.86■□□□□ 0.13
CX3CL1-204ENST00000565912 TMPOP42166 694 aaKnown RBP15.86■□□□□ 0.13
CX3CL1-204ENST00000565912 ANAPC15P60006 121 aa15.86■□□□□ 0.13
CX3CL1-204ENST00000565912 LARP1Q6PKG0 1096 aaKnown RBP15.86■□□□□ 0.13
CX3CL1-204ENST00000565912 TSG101Q99816 390 aa15.86■□□□□ 0.13
CX3CL1-204ENST00000565912 ZNF608Q9ULD9 1512 aaPredicted RBP15.86■□□□□ 0.13
CX3CL1-204ENST00000565912 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.86■□□□□ 0.13
CX3CL1-204ENST00000565912 NAIPQ13075 1403 aa15.85■□□□□ 0.13
CX3CL1-204ENST00000565912 GLRX3O76003 335 aaKnown RBP15.85■□□□□ 0.13
CX3CL1-204ENST00000565912 FKBP15Q5T1M5 1219 aa15.85■□□□□ 0.13
CX3CL1-204ENST00000565912 DNAI2Q9GZS0 605 aa15.85■□□□□ 0.13
CX3CL1-204ENST00000565912 PPM1FP49593 454 aaPredicted RBP15.85■□□□□ 0.13
CX3CL1-204ENST00000565912 ZNF444Q8N0Y2 327 aaPredicted RBP15.85■□□□□ 0.13
CX3CL1-204ENST00000565912 CTCFLQ8NI51 663 aaPredicted RBP15.85■□□□□ 0.13
CX3CL1-204ENST00000565912 TTLL12Q14166 644 aaPredicted RBP15.85■□□□□ 0.13
CX3CL1-204ENST00000565912 CACNA2D4Q7Z3S7 1137 aa15.85■□□□□ 0.13
CX3CL1-204ENST00000565912 ZNF219Q9P2Y4 722 aaPredicted RBP15.85■□□□□ 0.13
CX3CL1-204ENST00000565912 SYCE3A1L190 88 aa15.85■□□□□ 0.13
CX3CL1-204ENST00000565912 KIF14Q15058 1648 aa15.85■□□□□ 0.13
CX3CL1-204ENST00000565912 WDHD1O75717 1129 aaPredicted RBP15.84■□□□□ 0.13
CX3CL1-204ENST00000565912 USHBP1Q8N6Y0 703 aa15.84■□□□□ 0.13
CX3CL1-204ENST00000565912 CCDC113Q9H0I3 377 aa15.84■□□□□ 0.13
CX3CL1-204ENST00000565912 CIZ1Q9ULV3 898 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms