RNA–Protein interactions for RNA: ENST00000563003.1

AC040174.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC040174.1, Length 2,571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040174.1-201ENST00000563003 CHAMP1Q96JM3 812 aa16.73■□□□□ 0.27
AC040174.1-201ENST00000563003 CWC22Q9HCG8 908 aaKnown RBP16.73■□□□□ 0.27
AC040174.1-201ENST00000563003 ADGRL3Q9HAR2 1447 aa16.72■□□□□ 0.27
AC040174.1-201ENST00000563003 KIAA2012Q0VF49 1180 aa16.72■□□□□ 0.27
AC040174.1-201ENST00000563003 ZGPATQ8N5A5 531 aaKnown RBP16.72■□□□□ 0.27
AC040174.1-201ENST00000563003 C1orf115Q9H7X2 142 aa16.72■□□□□ 0.27
AC040174.1-201ENST00000563003 ZDHHC9Q9Y397 364 aa16.72■□□□□ 0.27
AC040174.1-201ENST00000563003 ZBTB7CA1YPR0 619 aa16.72■□□□□ 0.27
AC040174.1-201ENST00000563003 NFE2L2Q16236 605 aa16.72■□□□□ 0.27
AC040174.1-201ENST00000563003 TSC1Q92574 1164 aa16.72■□□□□ 0.27
AC040174.1-201ENST00000563003 ZBTB7BO15156 539 aaPredicted RBP16.71■□□□□ 0.27
AC040174.1-201ENST00000563003 PIK3C2AO00443 1686 aa16.71■□□□□ 0.27
AC040174.1-201ENST00000563003 PTMAP06454 111 aaKnown RBP16.71■□□□□ 0.26
AC040174.1-201ENST00000563003 ZNF710Q8N1W2 664 aa16.71■□□□□ 0.26
AC040174.1-201ENST00000563003 PHACTR3Q96KR7 559 aa16.71■□□□□ 0.26
AC040174.1-201ENST00000563003 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.71■□□□□ 0.26
AC040174.1-201ENST00000563003 GSPT1P15170 499 aaKnown RBP16.7■□□□□ 0.26
AC040174.1-201ENST00000563003 DNTTIP2Q5QJE6 756 aaKnown RBP16.7■□□□□ 0.26
AC040174.1-201ENST00000563003 EIF4A2Q14240 407 aaKnown RBP16.7■□□□□ 0.26
AC040174.1-201ENST00000563003 PHF8Q9UPP1 1060 aa16.7■□□□□ 0.26
AC040174.1-201ENST00000563003 PEAK1Q9H792 1746 aa16.7■□□□□ 0.26
AC040174.1-201ENST00000563003 SIRT2Q8IXJ6 389 aa16.69■□□□□ 0.26
AC040174.1-201ENST00000563003 NWD1Q149M9 1564 aa16.69■□□□□ 0.26
AC040174.1-201ENST00000563003 CBX1P83916 185 aa16.69■□□□□ 0.26
AC040174.1-201ENST00000563003 FGD1P98174 961 aa16.69■□□□□ 0.26
AC040174.1-201ENST00000563003 USP26Q9BXU7 913 aa16.69■□□□□ 0.26
AC040174.1-201ENST00000563003 ALDH1L2Q3SY69 923 aa16.68■□□□□ 0.26
AC040174.1-201ENST00000563003 RBM33Q96EV2 1170 aaKnown RBP16.68■□□□□ 0.26
AC040174.1-201ENST00000563003 USP54Q70EL1 1684 aa16.68■□□□□ 0.26
AC040174.1-201ENST00000563003 NLRP6P59044 892 aa16.68■□□□□ 0.26
AC040174.1-201ENST00000563003 PRIMPOLQ96LW4 560 aa16.67■□□□□ 0.26
AC040174.1-201ENST00000563003 SBNO1A3KN83 1393 aa16.67■□□□□ 0.26
AC040174.1-201ENST00000563003 MAP3K19Q56UN5 1328 aa16.67■□□□□ 0.26
AC040174.1-201ENST00000563003 HSP90AB2PQ58FF8 381 aa16.67■□□□□ 0.26
AC040174.1-201ENST00000563003 SOX12O15370 315 aa16.66■□□□□ 0.26
AC040174.1-201ENST00000563003 GTPBP4Q9BZE4 634 aaKnown RBP16.66■□□□□ 0.26
AC040174.1-201ENST00000563003 FLT4P35916 1363 aa16.66■□□□□ 0.26
AC040174.1-201ENST00000563003 DLG5Q8TDM6 1919 aa16.66■□□□□ 0.26
AC040174.1-201ENST00000563003 LMOD3Q0VAK6 560 aa16.66■□□□□ 0.26
AC040174.1-201ENST00000563003 C14orf37Q86TY3 774 aa16.66■□□□□ 0.26
AC040174.1-201ENST00000563003 RGPD1P0DJD0 1748 aa16.65■□□□□ 0.26
AC040174.1-201ENST00000563003 GTF2F1P35269 517 aaKnown RBP eCLIP16.65■□□□□ 0.26
AC040174.1-201ENST00000563003 FOXD4L5Q5VV16 416 aaPredicted RBP16.65■□□□□ 0.26
AC040174.1-201ENST00000563003 PLEKHM2Q8IWE5 1019 aa16.65■□□□□ 0.26
AC040174.1-201ENST00000563003 ABTB2Q8N961 1025 aa16.65■□□□□ 0.26
AC040174.1-201ENST00000563003 FOXD4L4Q8WXT5 416 aaPredicted RBP16.65■□□□□ 0.26
AC040174.1-201ENST00000563003 ST18O60284 1047 aa16.65■□□□□ 0.26
AC040174.1-201ENST00000563003 MBD3O95983 291 aa16.65■□□□□ 0.26
AC040174.1-201ENST00000563003 HMGN5P82970 282 aaKnown RBP16.65■□□□□ 0.26
AC040174.1-201ENST00000563003 ATP2B3Q16720 1220 aa16.65■□□□□ 0.26
AC040174.1-201ENST00000563003 SULT6B1Q6IMI4 303 aa16.65■□□□□ 0.26
AC040174.1-201ENST00000563003 MPNDQ8N594 471 aa16.65■□□□□ 0.26
AC040174.1-201ENST00000563003 MARF1Q9Y4F3 1742 aaKnown RBP16.64■□□□□ 0.26
AC040174.1-201ENST00000563003 PPP4R3BQ5MIZ7 849 aa16.64■□□□□ 0.25
AC040174.1-201ENST00000563003 TSPY26PQ9H489 355 aa16.64■□□□□ 0.25
AC040174.1-201ENST00000563003 KIF24Q5T7B8 1368 aa16.64■□□□□ 0.25
AC040174.1-201ENST00000563003 ESCO1Q5FWF5 840 aa16.64■□□□□ 0.25
AC040174.1-201ENST00000563003 PIBF1Q8WXW3 757 aa16.64■□□□□ 0.25
AC040174.1-201ENST00000563003 ZNF830Q96NB3 372 aaPredicted RBP16.64■□□□□ 0.25
AC040174.1-201ENST00000563003 CHMP4BQ9H444 224 aaKnown RBP16.64■□□□□ 0.25
AC040174.1-201ENST00000563003 KIF20AO95235 890 aa16.63■□□□□ 0.25
AC040174.1-201ENST00000563003 AMPHP49418 695 aa16.63■□□□□ 0.25
AC040174.1-201ENST00000563003 NOLC1Q14978 699 aaKnown RBP eCLIP16.63■□□□□ 0.25
AC040174.1-201ENST00000563003 ZNF335Q9H4Z2 1342 aaPredicted RBP16.63■□□□□ 0.25
AC040174.1-201ENST00000563003 FAM177BA6PVY3 158 aa16.63■□□□□ 0.25
AC040174.1-201ENST00000563003 PROSER2Q86WR7 435 aaPredicted RBP16.63■□□□□ 0.25
AC040174.1-201ENST00000563003 BRPF1P55201 1214 aaPredicted RBP16.62■□□□□ 0.25
AC040174.1-201ENST00000563003 AEBP1Q8IUX7 1158 aa16.62■□□□□ 0.25
AC040174.1-201ENST00000563003 CFAP44Q96MT7 982 aa16.62■□□□□ 0.25
AC040174.1-201ENST00000563003 ARHGEF10O15013 1369 aa16.62■□□□□ 0.25
AC040174.1-201ENST00000563003 PSME1Q06323 249 aa16.62■□□□□ 0.25
AC040174.1-201ENST00000563003 TTC22Q5TAA0 569 aa16.62■□□□□ 0.25
AC040174.1-201ENST00000563003 IFT57Q9NWB7 429 aa16.62■□□□□ 0.25
AC040174.1-201ENST00000563003 GNAI1P63096 354 aa16.61■□□□□ 0.25
AC040174.1-201ENST00000563003 KIF3AQ9Y496 699 aa16.61■□□□□ 0.25
AC040174.1-201ENST00000563003 NUTM2GQ5VZR2 741 aa16.61■□□□□ 0.25
AC040174.1-201ENST00000563003 INTS3Q68E01 1043 aaKnown RBP16.61■□□□□ 0.25
AC040174.1-201ENST00000563003 C17orf53Q8N3J3 647 aaPredicted RBP16.6■□□□□ 0.25
AC040174.1-201ENST00000563003 LETM1O95202 739 aaPredicted RBP16.6■□□□□ 0.25
AC040174.1-201ENST00000563003 C16orf71Q8IYS4 520 aaPredicted RBP16.6■□□□□ 0.25
AC040174.1-201ENST00000563003 MRPL50Q8N5N7 158 aaKnown RBP16.59■□□□□ 0.25
AC040174.1-201ENST00000563003 ZNF428Q96B54 188 aa16.59■□□□□ 0.25
AC040174.1-201ENST00000563003 TTC12Q9H892 705 aaPredicted RBP16.59■□□□□ 0.25
AC040174.1-201ENST00000563003 ZNF853P0CG23 659 aa16.59■□□□□ 0.25
AC040174.1-201ENST00000563003 ARHGAP45Q92619 1136 aa16.59■□□□□ 0.25
AC040174.1-201ENST00000563003 THUMPD2Q9BTF0 503 aaKnown RBP16.59■□□□□ 0.25
AC040174.1-201ENST00000563003 C19orf44Q9H6X5 657 aa16.58■□□□□ 0.25
AC040174.1-201ENST00000563003 BCL2L12Q9HB09 334 aa16.58■□□□□ 0.25
AC040174.1-201ENST00000563003 HOXC9P31274 260 aa16.58■□□□□ 0.24
AC040174.1-201ENST00000563003 LTBP4Q8N2S1 1624 aa16.58■□□□□ 0.24
AC040174.1-201ENST00000563003 SPDYE4A6NLX3 237 aa16.57■□□□□ 0.24
AC040174.1-201ENST00000563003 KDRP35968 1356 aa16.57■□□□□ 0.24
AC040174.1-201ENST00000563003 VAMP4O75379 141 aa16.57■□□□□ 0.24
AC040174.1-201ENST00000563003 BRD1O95696 1058 aa16.57■□□□□ 0.24
AC040174.1-201ENST00000563003 FKBP5Q13451 457 aaPredicted RBP16.57■□□□□ 0.24
AC040174.1-201ENST00000563003 SYAP1Q96A49 352 aaPredicted RBP16.57■□□□□ 0.24
AC040174.1-201ENST00000563003 USP25Q9UHP3 1055 aa16.57■□□□□ 0.24
AC040174.1-201ENST00000563003 IGSF1Q8N6C5 1336 aa16.57■□□□□ 0.24
AC040174.1-201ENST00000563003 SDSP20132 328 aa16.56■□□□□ 0.24
AC040174.1-201ENST00000563003 ORAI2Q96SN7 254 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms