RNA–Protein interactions for RNA: ENST00000557592.5

APEX1-220, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-220ENST00000557592 SLC52A2Q9HAB3 445 aa14.94□□□□□ -0.02
APEX1-220ENST00000557592 EN1Q05925 392 aaPredicted RBP14.93□□□□□ -0.02
APEX1-220ENST00000557592 LMOD3Q0VAK6 560 aa14.93□□□□□ -0.02
APEX1-220ENST00000557592 CEMIPQ8WUJ3 1361 aa14.93□□□□□ -0.02
APEX1-220ENST00000557592 THUMPD2Q9BTF0 503 aaKnown RBP14.92□□□□□ -0.02
APEX1-220ENST00000557592 RGPD3A6NKT7 1758 aaPredicted RBP14.91□□□□□ -0.02
APEX1-220ENST00000557592 SIPA1L3O60292 1781 aaPredicted RBP14.91□□□□□ -0.02
APEX1-220ENST00000557592 RGPD4Q7Z3J3 1758 aa14.91□□□□□ -0.02
APEX1-220ENST00000557592 PLSCR1O15162 318 aa14.91□□□□□ -0.02
APEX1-220ENST00000557592 ASAP1Q9ULH1 1129 aa14.91□□□□□ -0.02
APEX1-220ENST00000557592 PALLDQ8WX93 1383 aa14.9□□□□□ -0.02
APEX1-220ENST00000557592 EZH2Q15910 746 aaKnown RBP14.9□□□□□ -0.02
APEX1-220ENST00000557592 SMARCC1Q92922 1105 aaPredicted RBP14.9□□□□□ -0.02
APEX1-220ENST00000557592 TRIM35Q9UPQ4 493 aa14.9□□□□□ -0.02
APEX1-220ENST00000557592 CAMKK2Q96RR4 588 aa14.89□□□□□ -0.03
APEX1-220ENST00000557592 ATG3Q9NT62 314 aa14.89□□□□□ -0.03
APEX1-220ENST00000557592 PAPPAQ13219 1627 aa14.88□□□□□ -0.03
APEX1-220ENST00000557592 SLC39A6Q13433 755 aa14.88□□□□□ -0.03
APEX1-220ENST00000557592 SALL2Q9Y467 1007 aaPredicted RBP14.88□□□□□ -0.03
APEX1-220ENST00000557592 LY75O60449 1722 aa14.88□□□□□ -0.03
APEX1-220ENST00000557592 BTBD11A6QL63 1104 aa14.87□□□□□ -0.03
APEX1-220ENST00000557592 TAF7Q15545 349 aaPredicted RBP14.87□□□□□ -0.03
APEX1-220ENST00000557592 TXNRD1Q16881 649 aa14.87□□□□□ -0.03
APEX1-220ENST00000557592 RREB1Q92766 1687 aa14.87□□□□□ -0.03
APEX1-220ENST00000557592 PTCD1O75127 700 aaKnown RBP14.86□□□□□ -0.03
APEX1-220ENST00000557592 TTC5Q8N0Z6 440 aa14.86□□□□□ -0.03
APEX1-220ENST00000557592 RBM42Q9BTD8 480 aaKnown RBP14.86□□□□□ -0.03
APEX1-220ENST00000557592 CCNL1Q9UK58 526 aaPredicted RBP14.86□□□□□ -0.03
APEX1-220ENST00000557592 KCNQ4P56696 695 aa14.85□□□□□ -0.03
APEX1-220ENST00000557592 CCDC27Q2M243 656 aa14.85□□□□□ -0.03
APEX1-220ENST00000557592 PROM2Q8N271 834 aa14.85□□□□□ -0.03
APEX1-220ENST00000557592 MIS18AQ9NYP9 233 aa14.85□□□□□ -0.03
APEX1-220ENST00000557592 LAS1LQ9Y4W2 734 aaKnown RBP14.85□□□□□ -0.03
APEX1-220ENST00000557592 NUP188Q5SRE5 1749 aa14.85□□□□□ -0.03
APEX1-220ENST00000557592 UBR2Q8IWV8 1755 aa14.84□□□□□ -0.03
APEX1-220ENST00000557592 LOC102724428A0A0B4J2F2 783 aa14.84□□□□□ -0.03
APEX1-220ENST00000557592 SIK1P57059 783 aa14.84□□□□□ -0.03
APEX1-220ENST00000557592 CALD1Q05682 793 aaKnown RBP14.84□□□□□ -0.03
APEX1-220ENST00000557592 NCBP3Q53F19 620 aaKnown RBP14.84□□□□□ -0.03
APEX1-220ENST00000557592 SLC27A3Q5K4L6 730 aa14.84□□□□□ -0.03
APEX1-220ENST00000557592 ZNF790Q6PG37 636 aa14.84□□□□□ -0.03
APEX1-220ENST00000557592 WWC1Q8IX03 1113 aa14.84□□□□□ -0.03
APEX1-220ENST00000557592 NGEFQ8N5V2 710 aa14.84□□□□□ -0.03
APEX1-220ENST00000557592 KDM3BQ7LBC6 1761 aa14.83□□□□□ -0.03
APEX1-220ENST00000557592 KCPQ6ZWJ8 1503 aa14.83□□□□□ -0.04
APEX1-220ENST00000557592 KCNQ3O43525 872 aa14.83□□□□□ -0.04
APEX1-220ENST00000557592 LRRC4BQ9NT99 713 aa14.83□□□□□ -0.04
APEX1-220ENST00000557592 TSPYL4Q9UJ04 414 aa14.83□□□□□ -0.04
APEX1-220ENST00000557592 ATP6V1AP38606 617 aa14.82□□□□□ -0.04
APEX1-220ENST00000557592 ZNF496Q96IT1 587 aaPredicted RBP14.82□□□□□ -0.04
APEX1-220ENST00000557592 TAF1LQ8IZX4 1826 aa14.82□□□□□ -0.04
APEX1-220ENST00000557592 C5P01031 1676 aa14.81□□□□□ -0.04
APEX1-220ENST00000557592 FMNL2Q96PY5 1086 aa14.81□□□□□ -0.04
APEX1-220ENST00000557592 SLC4A9Q96Q91 983 aa14.81□□□□□ -0.04
APEX1-220ENST00000557592 ZNF831Q5JPB2 1677 aa14.81□□□□□ -0.04
APEX1-220ENST00000557592 ITPK1Q13572 414 aa14.8□□□□□ -0.04
APEX1-220ENST00000557592 CFAP44Q96MT7 982 aa14.8□□□□□ -0.04
APEX1-220ENST00000557592 IFT57Q9NWB7 429 aa14.8□□□□□ -0.04
APEX1-220ENST00000557592 BABAM1Q9NWV8 329 aa14.8□□□□□ -0.04
APEX1-220ENST00000557592 TJP1Q07157 1748 aa14.8□□□□□ -0.04
APEX1-220ENST00000557592 CHL1O00533 1208 aa14.79□□□□□ -0.04
APEX1-220ENST00000557592 GNAI1P63096 354 aa14.79□□□□□ -0.04
APEX1-220ENST00000557592 HEG1Q9ULI3 1381 aa14.79□□□□□ -0.04
APEX1-220ENST00000557592 COL5A3P25940 1745 aaPredicted RBP14.78□□□□□ -0.04
APEX1-220ENST00000557592 IL16Q14005 1332 aa14.78□□□□□ -0.04
APEX1-220ENST00000557592 ZNF853P0CG23 659 aa14.78□□□□□ -0.04
APEX1-220ENST00000557592 HNRNPUQ00839 825 aaKnown RBP eCLIP14.78□□□□□ -0.04
APEX1-220ENST00000557592 NBPF14Q5TI25 921 aa14.78□□□□□ -0.04
APEX1-220ENST00000557592 WDR63Q8IWG1 891 aa14.78□□□□□ -0.04
APEX1-220ENST00000557592 LINC00116Q8NCU8 138 aa14.78□□□□□ -0.04
APEX1-220ENST00000557592 ANO8Q9HCE9 1232 aaPredicted RBP14.78□□□□□ -0.04
APEX1-220ENST00000557592 MBIPQ9NS73 344 aa14.78□□□□□ -0.04
APEX1-220ENST00000557592 C4BP0C0L5 1744 aa14.78□□□□□ -0.04
APEX1-220ENST00000557592 CICQ96RK0 1608 aaPredicted RBP14.77□□□□□ -0.04
APEX1-220ENST00000557592 HMGB2P26583 209 aaKnown RBP14.77□□□□□ -0.05
APEX1-220ENST00000557592 EIF4A1P60842 406 aaKnown RBP14.77□□□□□ -0.05
APEX1-220ENST00000557592 DNAJC10Q8IXB1 793 aa14.77□□□□□ -0.05
APEX1-220ENST00000557592 VSIG10Q8N0Z9 540 aa14.77□□□□□ -0.05
APEX1-220ENST00000557592 STK32BQ9NY57 414 aa14.77□□□□□ -0.05
APEX1-220ENST00000557592 ZNF521Q96K83 1311 aa14.76□□□□□ -0.05
APEX1-220ENST00000557592 SNRPA1P09661 255 aaKnown RBP14.76□□□□□ -0.05
APEX1-220ENST00000557592 TSR2Q969E8 191 aaKnown RBP14.76□□□□□ -0.05
APEX1-220ENST00000557592 ZNF827Q17R98 1081 aa14.75□□□□□ -0.05
APEX1-220ENST00000557592 AKT1S1Q96B36 256 aa14.75□□□□□ -0.05
APEX1-220ENST00000557592 AK7Q96M32 723 aa14.75□□□□□ -0.05
APEX1-220ENST00000557592 TEX13AQ9BXU3 409 aaPredicted RBP14.75□□□□□ -0.05
APEX1-220ENST00000557592 PRAMEF22A3QJZ6 481 aa14.74□□□□□ -0.05
APEX1-220ENST00000557592 CRKLP46109 303 aaKnown RBP14.74□□□□□ -0.05
APEX1-220ENST00000557592 GOLGA2Q08379 1002 aa14.74□□□□□ -0.05
APEX1-220ENST00000557592 SLC15A2Q16348 729 aa14.74□□□□□ -0.05
APEX1-220ENST00000557592 TFCP2L1Q9NZI6 479 aa14.74□□□□□ -0.05
APEX1-220ENST00000557592 MYH14Q7Z406 1995 aaKnown RBP14.74□□□□□ -0.05
APEX1-220ENST00000557592 TUBGCP6Q96RT7 1819 aa14.73□□□□□ -0.05
APEX1-220ENST00000557592 LAMB4A4D0S4 1761 aa14.73□□□□□ -0.05
APEX1-220ENST00000557592 CNTNAP4Q9C0A0 1308 aa14.73□□□□□ -0.05
APEX1-220ENST00000557592 GIGYF1O75420 1035 aaPredicted RBP14.73□□□□□ -0.05
APEX1-220ENST00000557592 STARD3NLO95772 234 aa14.73□□□□□ -0.05
APEX1-220ENST00000557592 CYP19A1P11511 503 aaPredicted RBP14.73□□□□□ -0.05
APEX1-220ENST00000557592 R3HDM1Q15032 1099 aaKnown RBP14.73□□□□□ -0.05
APEX1-220ENST00000557592 KRT24Q2M2I5 525 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms