RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 SYTL4Q96C24 671 aaPredicted RBP14.08□□□□□ -0.16
TMEM260-206ENST00000555046 RGPD5Q99666 1765 aa14.07□□□□□ -0.16
TMEM260-206ENST00000555046 MEGF6O75095 1541 aa14.07□□□□□ -0.16
TMEM260-206ENST00000555046 WDR43Q15061 677 aaKnown RBP eCLIP14.07□□□□□ -0.16
TMEM260-206ENST00000555046 AKAP4Q5JQC9 854 aa14.07□□□□□ -0.16
TMEM260-206ENST00000555046 ACSBG1Q96GR2 724 aa14.07□□□□□ -0.16
TMEM260-206ENST00000555046 ERVV-2B6SEH9 535 aa14.06□□□□□ -0.16
TMEM260-206ENST00000555046 PAPPAQ13219 1627 aa14.05□□□□□ -0.16
TMEM260-206ENST00000555046 PRKAR2BP31323 418 aa14.05□□□□□ -0.16
TMEM260-206ENST00000555046 PROM2Q8N271 834 aa14.05□□□□□ -0.16
TMEM260-206ENST00000555046 ZNF526Q8TF50 670 aaPredicted RBP14.05□□□□□ -0.16
TMEM260-206ENST00000555046 LRRC37A3O60309 1634 aa14.04□□□□□ -0.16
TMEM260-206ENST00000555046 YBX3P16989 372 aaKnown RBP eCLIP14.04□□□□□ -0.16
TMEM260-206ENST00000555046 SMARCC1Q92922 1105 aaPredicted RBP14.04□□□□□ -0.16
TMEM260-206ENST00000555046 RSPH6AQ9H0K4 717 aa14.04□□□□□ -0.16
TMEM260-206ENST00000555046 CABP4P57796 275 aa14.03□□□□□ -0.16
TMEM260-206ENST00000555046 MTHFSDQ2M296 383 aaKnown RBP14.03□□□□□ -0.16
TMEM260-206ENST00000555046 MPRIPQ6WCQ1 1025 aa14.03□□□□□ -0.16
TMEM260-206ENST00000555046 JMYQ8N9B5 988 aa14.03□□□□□ -0.16
TMEM260-206ENST00000555046 STK32BQ9NY57 414 aa14.03□□□□□ -0.16
TMEM260-206ENST00000555046 TMOD3Q9NYL9 352 aa14.03□□□□□ -0.16
TMEM260-206ENST00000555046 GNAT3A8MTJ3 354 aa14.02□□□□□ -0.17
TMEM260-206ENST00000555046 HTATSF1O43719 755 aaKnown RBP14.02□□□□□ -0.17
TMEM260-206ENST00000555046 SLC15A2Q16348 729 aa14.02□□□□□ -0.17
TMEM260-206ENST00000555046 PTF1AQ7RTS3 328 aa14.02□□□□□ -0.17
TMEM260-206ENST00000555046 NLGN2Q8NFZ4 835 aa14.02□□□□□ -0.17
TMEM260-206ENST00000555046 RTF1Q92541 710 aaKnown RBP14.02□□□□□ -0.17
TMEM260-206ENST00000555046 WWC3Q9ULE0 1092 aa14.02□□□□□ -0.17
TMEM260-206ENST00000555046 COL3A1P02461 1466 aaPredicted RBP14.01□□□□□ -0.17
TMEM260-206ENST00000555046 MAPK8IP3Q9UPT6 1336 aa14.01□□□□□ -0.17
TMEM260-206ENST00000555046 KIF3CO14782 793 aa14.01□□□□□ -0.17
TMEM260-206ENST00000555046 SLC27A3Q5K4L6 730 aa14.01□□□□□ -0.17
TMEM260-206ENST00000555046 KLHL34Q8N239 644 aa14.01□□□□□ -0.17
TMEM260-206ENST00000555046 PHACTR3Q96KR7 559 aa14□□□□□ -0.17
TMEM260-206ENST00000555046 RNMTO43148 476 aaKnown RBP13.99□□□□□ -0.17
TMEM260-206ENST00000555046 TXNRD1Q16881 649 aa13.99□□□□□ -0.17
TMEM260-206ENST00000555046 PIGBQ92521 554 aa13.99□□□□□ -0.17
TMEM260-206ENST00000555046 KLRG1Q96E93 195 aa13.99□□□□□ -0.17
TMEM260-206ENST00000555046 QSER1Q2KHR3 1735 aa13.98□□□□□ -0.17
TMEM260-206ENST00000555046 GRIN3BO60391 1043 aa13.98□□□□□ -0.17
TMEM260-206ENST00000555046 NFATC2IPQ8NCF5 419 aa13.98□□□□□ -0.17
TMEM260-206ENST00000555046 RUNDC1Q96C34 613 aa13.98□□□□□ -0.17
TMEM260-206ENST00000555046 PLEKHF1Q96S99 279 aa13.98□□□□□ -0.17
TMEM260-206ENST00000555046 MRS2Q9HD23 443 aa13.98□□□□□ -0.17
TMEM260-206ENST00000555046 ADAMTS8Q9UP79 889 aa13.98□□□□□ -0.17
TMEM260-206ENST00000555046 WNK3Q9BYP7 1800 aa13.98□□□□□ -0.17
TMEM260-206ENST00000555046 LMOD3Q0VAK6 560 aa13.97□□□□□ -0.17
TMEM260-206ENST00000555046 TEFQ10587 303 aa13.97□□□□□ -0.17
TMEM260-206ENST00000555046 SLC52A2Q9HAB3 445 aa13.97□□□□□ -0.17
TMEM260-206ENST00000555046 TUBGCP6Q96RT7 1819 aa13.97□□□□□ -0.17
TMEM260-206ENST00000555046 NFE2L2Q16236 605 aa13.96□□□□□ -0.17
TMEM260-206ENST00000555046 LGR6Q9HBX8 967 aa13.96□□□□□ -0.17
TMEM260-206ENST00000555046 HTRA3P83110 453 aa13.95□□□□□ -0.18
TMEM260-206ENST00000555046 DIEXFQ68CQ4 756 aaKnown RBP13.95□□□□□ -0.18
TMEM260-206ENST00000555046 RIPK4P57078 832 aa13.94□□□□□ -0.18
TMEM260-206ENST00000555046 IL17REQ8NFR9 667 aa13.94□□□□□ -0.18
TMEM260-206ENST00000555046 PNISRQ8TF01 805 aaKnown RBP13.94□□□□□ -0.18
TMEM260-206ENST00000555046 ATG3Q9NT62 314 aa13.94□□□□□ -0.18
TMEM260-206ENST00000555046 CCNL1Q9UK58 526 aaPredicted RBP13.94□□□□□ -0.18
TMEM260-206ENST00000555046 RGPD2P0DJD1 1756 aa13.94□□□□□ -0.18
TMEM260-206ENST00000555046 HOXD11P31277 338 aaPredicted RBP13.93□□□□□ -0.18
TMEM260-206ENST00000555046 ASAP1Q9ULH1 1129 aa13.93□□□□□ -0.18
TMEM260-206ENST00000555046 LOC102724428A0A0B4J2F2 783 aa13.92□□□□□ -0.18
TMEM260-206ENST00000555046 TMPOP42166 694 aaKnown RBP13.92□□□□□ -0.18
TMEM260-206ENST00000555046 SIK1P57059 783 aa13.92□□□□□ -0.18
TMEM260-206ENST00000555046 C1QBPQ07021 282 aaKnown RBP13.92□□□□□ -0.18
TMEM260-206ENST00000555046 TTC5Q8N0Z6 440 aa13.92□□□□□ -0.18
TMEM260-206ENST00000555046 PALLDQ8WX93 1383 aa13.92□□□□□ -0.18
TMEM260-206ENST00000555046 CCER2I3L3R5 266 aa13.91□□□□□ -0.18
TMEM260-206ENST00000555046 TAF7Q15545 349 aaPredicted RBP13.91□□□□□ -0.18
TMEM260-206ENST00000555046 BTBD11A6QL63 1104 aa13.9□□□□□ -0.18
TMEM260-206ENST00000555046 ATP6V1AP38606 617 aa13.9□□□□□ -0.18
TMEM260-206ENST00000555046 CALD1Q05682 793 aaKnown RBP13.9□□□□□ -0.18
TMEM260-206ENST00000555046 CCDC146Q8IYE0 955 aa13.9□□□□□ -0.18
TMEM260-206ENST00000555046 RBM42Q9BTD8 480 aaKnown RBP13.9□□□□□ -0.18
TMEM260-206ENST00000555046 TEX13AQ9BXU3 409 aaPredicted RBP13.9□□□□□ -0.18
TMEM260-206ENST00000555046 KAT6BQ8WYB5 2073 aa13.9□□□□□ -0.18
TMEM260-206ENST00000555046 NCBP3Q53F19 620 aaKnown RBP13.89□□□□□ -0.19
TMEM260-206ENST00000555046 MCM10Q7L590 875 aa13.89□□□□□ -0.19
TMEM260-206ENST00000555046 NGEFQ8N5V2 710 aa13.89□□□□□ -0.19
TMEM260-206ENST00000555046 FLAD1Q8NFF5 587 aa13.89□□□□□ -0.19
TMEM260-206ENST00000555046 LRRC4BQ9NT99 713 aa13.89□□□□□ -0.19
TMEM260-206ENST00000555046 BABAM1Q9NWV8 329 aa13.89□□□□□ -0.19
TMEM260-206ENST00000555046 PKD1L3Q7Z443 1732 aa13.89□□□□□ -0.19
TMEM260-206ENST00000555046 KDM6AO15550 1401 aaPredicted RBP13.89□□□□□ -0.19
TMEM260-206ENST00000555046 NHSQ6T4R5 1651 aa13.88□□□□□ -0.19
TMEM260-206ENST00000555046 CEMIPQ8WUJ3 1361 aa13.88□□□□□ -0.19
TMEM260-206ENST00000555046 PTCD1O75127 700 aaKnown RBP13.88□□□□□ -0.19
TMEM260-206ENST00000555046 NEUROD2Q15784 382 aa13.88□□□□□ -0.19
TMEM260-206ENST00000555046 FAM161AQ3B820 660 aa13.88□□□□□ -0.19
TMEM260-206ENST00000555046 CCDC184Q52MB2 194 aa13.88□□□□□ -0.19
TMEM260-206ENST00000555046 ZNF790Q6PG37 636 aa13.88□□□□□ -0.19
TMEM260-206ENST00000555046 VSIG10Q8N0Z9 540 aa13.88□□□□□ -0.19
TMEM260-206ENST00000555046 TFCP2L1Q9NZI6 479 aa13.88□□□□□ -0.19
TMEM260-206ENST00000555046 APAF1O14727 1248 aa13.87□□□□□ -0.19
TMEM260-206ENST00000555046 TOMM70O94826 608 aa13.87□□□□□ -0.19
TMEM260-206ENST00000555046 HSPA1AP0DMV8 641 aaKnown RBP13.87□□□□□ -0.19
TMEM260-206ENST00000555046 HSPA1BP0DMV9 641 aaKnown RBP13.87□□□□□ -0.19
TMEM260-206ENST00000555046 ZNF827Q17R98 1081 aa13.87□□□□□ -0.19
TMEM260-206ENST00000555046 STARD3NLO95772 234 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms