RNA–Protein interactions for RNA: ENST00000551594.1

CTDSP2-207, Transcript of CTD small phosphatase 2, humanhuman

TSL 3

Gene CTDSP2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-207ENST00000551594 SLC52A2Q9HAB3 445 aa24.78■■□□□ 1.56
CTDSP2-207ENST00000551594 HTATSF1O43719 755 aaKnown RBP24.77■■□□□ 1.56
CTDSP2-207ENST00000551594 PLSCR1O15162 318 aa24.76■■□□□ 1.55
CTDSP2-207ENST00000551594 THUMPD2Q9BTF0 503 aaKnown RBP24.76■■□□□ 1.55
CTDSP2-207ENST00000551594 ASAP1Q9ULH1 1129 aa24.76■■□□□ 1.55
CTDSP2-207ENST00000551594 CEMIPQ8WUJ3 1361 aa24.76■■□□□ 1.55
CTDSP2-207ENST00000551594 TEFQ10587 303 aa24.74■■□□□ 1.55
CTDSP2-207ENST00000551594 PROM2Q8N271 834 aa24.74■■□□□ 1.55
CTDSP2-207ENST00000551594 ATG3Q9NT62 314 aa24.74■■□□□ 1.55
CTDSP2-207ENST00000551594 TRIM35Q9UPQ4 493 aa24.74■■□□□ 1.55
CTDSP2-207ENST00000551594 MRC1P22897 1456 aa24.74■■□□□ 1.55
CTDSP2-207ENST00000551594 SIPA1L3O60292 1781 aaPredicted RBP24.73■■□□□ 1.55
CTDSP2-207ENST00000551594 PALLDQ8WX93 1383 aa24.71■■□□□ 1.55
CTDSP2-207ENST00000551594 KCNQ4P56696 695 aa24.71■■□□□ 1.55
CTDSP2-207ENST00000551594 SLC39A6Q13433 755 aa24.71■■□□□ 1.55
CTDSP2-207ENST00000551594 TXNRD1Q16881 649 aa24.71■■□□□ 1.55
CTDSP2-207ENST00000551594 RGPD3A6NKT7 1758 aaPredicted RBP24.7■■□□□ 1.55
CTDSP2-207ENST00000551594 RGPD4Q7Z3J3 1758 aa24.7■■□□□ 1.55
CTDSP2-207ENST00000551594 LY75O60449 1722 aa24.7■■□□□ 1.54
CTDSP2-207ENST00000551594 SMARCC1Q92922 1105 aaPredicted RBP24.7■■□□□ 1.54
CTDSP2-207ENST00000551594 LMOD3Q0VAK6 560 aa24.69■■□□□ 1.54
CTDSP2-207ENST00000551594 SALL2Q9Y467 1007 aaPredicted RBP24.69■■□□□ 1.54
CTDSP2-207ENST00000551594 LRRC4BQ9NT99 713 aa24.68■■□□□ 1.54
CTDSP2-207ENST00000551594 MIS18AQ9NYP9 233 aa24.68■■□□□ 1.54
CTDSP2-207ENST00000551594 RREB1Q92766 1687 aa24.68■■□□□ 1.54
CTDSP2-207ENST00000551594 PAPPAQ13219 1627 aa24.66■■□□□ 1.54
CTDSP2-207ENST00000551594 BTBD11A6QL63 1104 aa24.66■■□□□ 1.54
CTDSP2-207ENST00000551594 PTCD1O75127 700 aaKnown RBP24.66■■□□□ 1.54
CTDSP2-207ENST00000551594 TAF7Q15545 349 aaPredicted RBP24.66■■□□□ 1.54
CTDSP2-207ENST00000551594 RBM42Q9BTD8 480 aaKnown RBP24.66■■□□□ 1.54
CTDSP2-207ENST00000551594 KCNQ3O43525 872 aa24.65■■□□□ 1.54
CTDSP2-207ENST00000551594 CCNL1Q9UK58 526 aaPredicted RBP24.65■■□□□ 1.54
CTDSP2-207ENST00000551594 NUP188Q5SRE5 1749 aa24.64■■□□□ 1.54
CTDSP2-207ENST00000551594 SLC4A9Q96Q91 983 aa24.64■■□□□ 1.54
CTDSP2-207ENST00000551594 LOC102724428A0A0B4J2F2 783 aa24.63■■□□□ 1.53
CTDSP2-207ENST00000551594 SIK1P57059 783 aa24.63■■□□□ 1.53
CTDSP2-207ENST00000551594 SLC27A3Q5K4L6 730 aa24.62■■□□□ 1.53
CTDSP2-207ENST00000551594 ZNF790Q6PG37 636 aa24.62■■□□□ 1.53
CTDSP2-207ENST00000551594 TTC5Q8N0Z6 440 aa24.61■■□□□ 1.53
CTDSP2-207ENST00000551594 KCPQ6ZWJ8 1503 aa24.61■■□□□ 1.53
CTDSP2-207ENST00000551594 ATP6V1AP38606 617 aa24.6■■□□□ 1.53
CTDSP2-207ENST00000551594 ITPK1Q13572 414 aa24.6■■□□□ 1.53
CTDSP2-207ENST00000551594 UBR2Q8IWV8 1755 aa24.59■■□□□ 1.53
CTDSP2-207ENST00000551594 CCDC27Q2M243 656 aa24.59■■□□□ 1.53
CTDSP2-207ENST00000551594 WWC1Q8IX03 1113 aa24.59■■□□□ 1.53
CTDSP2-207ENST00000551594 LAS1LQ9Y4W2 734 aaKnown RBP24.59■■□□□ 1.53
CTDSP2-207ENST00000551594 TAF1LQ8IZX4 1826 aa24.58■■□□□ 1.53
CTDSP2-207ENST00000551594 ZNF496Q96IT1 587 aaPredicted RBP24.58■■□□□ 1.53
CTDSP2-207ENST00000551594 KDM3BQ7LBC6 1761 aa24.57■■□□□ 1.52
CTDSP2-207ENST00000551594 ANO8Q9HCE9 1232 aaPredicted RBP24.57■■□□□ 1.52
CTDSP2-207ENST00000551594 C5P01031 1676 aa24.56■■□□□ 1.52
CTDSP2-207ENST00000551594 NCBP3Q53F19 620 aaKnown RBP24.56■■□□□ 1.52
CTDSP2-207ENST00000551594 LINC00116Q8NCU8 138 aa24.56■■□□□ 1.52
CTDSP2-207ENST00000551594 TSPYL4Q9UJ04 414 aa24.56■■□□□ 1.52
CTDSP2-207ENST00000551594 CHL1O00533 1208 aa24.54■■□□□ 1.52
CTDSP2-207ENST00000551594 ZNF827Q17R98 1081 aa24.54■■□□□ 1.52
CTDSP2-207ENST00000551594 DNAJC10Q8IXB1 793 aa24.54■■□□□ 1.52
CTDSP2-207ENST00000551594 FMNL2Q96PY5 1086 aa24.54■■□□□ 1.52
CTDSP2-207ENST00000551594 TJP1Q07157 1748 aa24.54■■□□□ 1.52
CTDSP2-207ENST00000551594 NBPF14Q5TI25 921 aa24.53■■□□□ 1.52
CTDSP2-207ENST00000551594 HEG1Q9ULI3 1381 aa24.53■■□□□ 1.52
CTDSP2-207ENST00000551594 ZNF831Q5JPB2 1677 aa24.53■■□□□ 1.52
CTDSP2-207ENST00000551594 CALD1Q05682 793 aaKnown RBP24.52■■□□□ 1.52
CTDSP2-207ENST00000551594 CFAP44Q96MT7 982 aa24.52■■□□□ 1.52
CTDSP2-207ENST00000551594 PRAMEF22A3QJZ6 481 aa24.51■■□□□ 1.51
CTDSP2-207ENST00000551594 ZNF853P0CG23 659 aa24.51■■□□□ 1.51
CTDSP2-207ENST00000551594 EIF4A1P60842 406 aaKnown RBP24.51■■□□□ 1.51
CTDSP2-207ENST00000551594 AKT1S1Q96B36 256 aa24.51■■□□□ 1.51
CTDSP2-207ENST00000551594 BABAM1Q9NWV8 329 aa24.51■■□□□ 1.51
CTDSP2-207ENST00000551594 STK32BQ9NY57 414 aa24.51■■□□□ 1.51
CTDSP2-207ENST00000551594 C4BP0C0L5 1744 aa24.5■■□□□ 1.51
CTDSP2-207ENST00000551594 COL5A3P25940 1745 aaPredicted RBP24.5■■□□□ 1.51
CTDSP2-207ENST00000551594 GNAI1P63096 354 aa24.5■■□□□ 1.51
CTDSP2-207ENST00000551594 SLC15A2Q16348 729 aa24.5■■□□□ 1.51
CTDSP2-207ENST00000551594 VSIG10Q8N0Z9 540 aa24.5■■□□□ 1.51
CTDSP2-207ENST00000551594 MBIPQ9NS73 344 aa24.5■■□□□ 1.51
CTDSP2-207ENST00000551594 IFT57Q9NWB7 429 aa24.5■■□□□ 1.51
CTDSP2-207ENST00000551594 PSDA5PKW4 1024 aaPredicted RBP24.49■■□□□ 1.51
CTDSP2-207ENST00000551594 R3HDM1Q15032 1099 aaKnown RBP24.49■■□□□ 1.51
CTDSP2-207ENST00000551594 WDR63Q8IWG1 891 aa24.49■■□□□ 1.51
CTDSP2-207ENST00000551594 NGEFQ8N5V2 710 aa24.49■■□□□ 1.51
CTDSP2-207ENST00000551594 MYH14Q7Z406 1995 aaKnown RBP24.49■■□□□ 1.51
CTDSP2-207ENST00000551594 CICQ96RK0 1608 aaPredicted RBP24.47■■□□□ 1.51
CTDSP2-207ENST00000551594 ZNF521Q96K83 1311 aa24.47■■□□□ 1.51
CTDSP2-207ENST00000551594 SMIM5Q71RC9 77 aa24.47■■□□□ 1.51
CTDSP2-207ENST00000551594 SPINK5Q9NQ38 1064 aaPredicted RBP24.47■■□□□ 1.51
CTDSP2-207ENST00000551594 SNRPA1P09661 255 aaKnown RBP24.46■■□□□ 1.51
CTDSP2-207ENST00000551594 CYP19A1P11511 503 aaPredicted RBP24.46■■□□□ 1.51
CTDSP2-207ENST00000551594 KRT24Q2M2I5 525 aa24.46■■□□□ 1.51
CTDSP2-207ENST00000551594 TSR2Q969E8 191 aaKnown RBP24.46■■□□□ 1.51
CTDSP2-207ENST00000551594 TFCP2L1Q9NZI6 479 aa24.46■■□□□ 1.51
CTDSP2-207ENST00000551594 USP16Q9Y5T5 823 aa24.46■■□□□ 1.51
CTDSP2-207ENST00000551594 TUBGCP6Q96RT7 1819 aa24.46■■□□□ 1.51
CTDSP2-207ENST00000551594 IL16Q14005 1332 aa24.45■■□□□ 1.5
CTDSP2-207ENST00000551594 CRKLP46109 303 aaKnown RBP24.45■■□□□ 1.5
CTDSP2-207ENST00000551594 AMIGO3Q86WK7 504 aa24.45■■□□□ 1.5
CTDSP2-207ENST00000551594 AK7Q96M32 723 aa24.45■■□□□ 1.5
CTDSP2-207ENST00000551594 GIGYF1O75420 1035 aaPredicted RBP24.44■■□□□ 1.5
CTDSP2-207ENST00000551594 HNRNPUQ00839 825 aaKnown RBP eCLIP24.44■■□□□ 1.5
CTDSP2-207ENST00000551594 INTS5Q6P9B9 1019 aaKnown RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms