RNA–Protein interactions for RNA: ENST00000545784.5

LINC00939-203, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best)

Gene LINC00939, Length 2,078 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-203ENST00000545784 RTF1Q92541 710 aaKnown RBP13.5□□□□□ -0.25
LINC00939-203ENST00000545784 THUMPD2Q9BTF0 503 aaKnown RBP13.5□□□□□ -0.25
LINC00939-203ENST00000545784 SLC52A2Q9HAB3 445 aa13.5□□□□□ -0.25
LINC00939-203ENST00000545784 ADAMTS7Q9UKP4 1686 aa13.5□□□□□ -0.25
LINC00939-203ENST00000545784 TOGARAM1Q9Y4F4 1720 aa13.49□□□□□ -0.25
LINC00939-203ENST00000545784 CABP4P57796 275 aa13.49□□□□□ -0.25
LINC00939-203ENST00000545784 CCDC27Q2M243 656 aa13.49□□□□□ -0.25
LINC00939-203ENST00000545784 SYTL4Q96C24 671 aaPredicted RBP13.49□□□□□ -0.25
LINC00939-203ENST00000545784 B4GALNT3Q6L9W6 998 aa13.48□□□□□ -0.25
LINC00939-203ENST00000545784 CCDC125Q86Z20 511 aa13.48□□□□□ -0.25
LINC00939-203ENST00000545784 TMOD3Q9NYL9 352 aa13.48□□□□□ -0.25
LINC00939-203ENST00000545784 LMOD3Q0VAK6 560 aa13.48□□□□□ -0.25
LINC00939-203ENST00000545784 SBF2Q86WG5 1849 aa13.48□□□□□ -0.25
LINC00939-203ENST00000545784 MRC1P22897 1456 aa13.47□□□□□ -0.25
LINC00939-203ENST00000545784 WWC1Q8IX03 1113 aa13.47□□□□□ -0.25
LINC00939-203ENST00000545784 ATG3Q9NT62 314 aa13.47□□□□□ -0.25
LINC00939-203ENST00000545784 APBA3O96018 575 aa13.46□□□□□ -0.25
LINC00939-203ENST00000545784 ASAP1Q9ULH1 1129 aa13.46□□□□□ -0.25
LINC00939-203ENST00000545784 SCN11AQ9UI33 1791 aa13.46□□□□□ -0.26
LINC00939-203ENST00000545784 TEFQ10587 303 aa13.46□□□□□ -0.26
LINC00939-203ENST00000545784 TAF7Q15545 349 aaPredicted RBP13.46□□□□□ -0.26
LINC00939-203ENST00000545784 NGEFQ8N5V2 710 aa13.46□□□□□ -0.26
LINC00939-203ENST00000545784 NHSQ6T4R5 1651 aa13.46□□□□□ -0.26
LINC00939-203ENST00000545784 DOT1LQ8TEK3 1739 aa13.45□□□□□ -0.26
LINC00939-203ENST00000545784 DLG5Q8TDM6 1919 aa13.45□□□□□ -0.26
LINC00939-203ENST00000545784 PLSCR1O15162 318 aa13.45□□□□□ -0.26
LINC00939-203ENST00000545784 PROM2Q8N271 834 aa13.45□□□□□ -0.26
LINC00939-203ENST00000545784 SALL2Q9Y467 1007 aaPredicted RBP13.45□□□□□ -0.26
LINC00939-203ENST00000545784 ZNF521Q96K83 1311 aa13.45□□□□□ -0.26
LINC00939-203ENST00000545784 CAMKK2Q96RR4 588 aa13.44□□□□□ -0.26
LINC00939-203ENST00000545784 SLC39A6Q13433 755 aa13.44□□□□□ -0.26
LINC00939-203ENST00000545784 MIS18AQ9NYP9 233 aa13.44□□□□□ -0.26
LINC00939-203ENST00000545784 ITGB4P16144 1822 aa13.43□□□□□ -0.26
LINC00939-203ENST00000545784 CHL1O00533 1208 aa13.43□□□□□ -0.26
LINC00939-203ENST00000545784 KCNQ3O43525 872 aa13.43□□□□□ -0.26
LINC00939-203ENST00000545784 ZNF853P0CG23 659 aa13.43□□□□□ -0.26
LINC00939-203ENST00000545784 DEFB132Q7Z7B7 95 aa13.43□□□□□ -0.26
LINC00939-203ENST00000545784 CCDC136Q96JN2 1154 aa13.43□□□□□ -0.26
LINC00939-203ENST00000545784 BTBD11A6QL63 1104 aa13.43□□□□□ -0.26
LINC00939-203ENST00000545784 NOP58Q9Y2X3 529 aaKnown RBP13.43□□□□□ -0.26
LINC00939-203ENST00000545784 KAT6BQ8WYB5 2073 aa13.42□□□□□ -0.26
LINC00939-203ENST00000545784 EN1Q05925 392 aaPredicted RBP13.42□□□□□ -0.26
LINC00939-203ENST00000545784 SF3B2Q13435 895 aaKnown RBP13.42□□□□□ -0.26
LINC00939-203ENST00000545784 ZNF790Q6PG37 636 aa13.42□□□□□ -0.26
LINC00939-203ENST00000545784 WDR63Q8IWG1 891 aa13.42□□□□□ -0.26
LINC00939-203ENST00000545784 SMARCC1Q92922 1105 aaPredicted RBP13.42□□□□□ -0.26
LINC00939-203ENST00000545784 SLC4A9Q96Q91 983 aa13.42□□□□□ -0.26
LINC00939-203ENST00000545784 BABAM1Q9NWV8 329 aa13.42□□□□□ -0.26
LINC00939-203ENST00000545784 TNS1Q9HBL0 1735 aaKnown RBP13.42□□□□□ -0.26
LINC00939-203ENST00000545784 SOCS7O14512 581 aa13.41□□□□□ -0.26
LINC00939-203ENST00000545784 BTAF1O14981 1849 aa13.41□□□□□ -0.26
LINC00939-203ENST00000545784 ANP32AP39687 249 aaKnown RBP13.41□□□□□ -0.26
LINC00939-203ENST00000545784 CFAP44Q96MT7 982 aa13.41□□□□□ -0.26
LINC00939-203ENST00000545784 PALLDQ8WX93 1383 aa13.41□□□□□ -0.26
LINC00939-203ENST00000545784 SIPA1L3O60292 1781 aaPredicted RBP13.4□□□□□ -0.26
LINC00939-203ENST00000545784 IL16Q14005 1332 aa13.4□□□□□ -0.26
LINC00939-203ENST00000545784 BAG6P46379 1132 aa13.4□□□□□ -0.26
LINC00939-203ENST00000545784 EZH2Q15910 746 aaKnown RBP13.4□□□□□ -0.26
LINC00939-203ENST00000545784 SPINK5Q9NQ38 1064 aaPredicted RBP13.4□□□□□ -0.26
LINC00939-203ENST00000545784 LRRC4BQ9NT99 713 aa13.4□□□□□ -0.26
LINC00939-203ENST00000545784 IFT57Q9NWB7 429 aa13.4□□□□□ -0.26
LINC00939-203ENST00000545784 CALD1Q05682 793 aaKnown RBP13.4□□□□□ -0.27
LINC00939-203ENST00000545784 LOC102724428A0A0B4J2F2 783 aa13.39□□□□□ -0.27
LINC00939-203ENST00000545784 PTCD1O75127 700 aaKnown RBP13.39□□□□□ -0.27
LINC00939-203ENST00000545784 KCNQ4P56696 695 aa13.39□□□□□ -0.27
LINC00939-203ENST00000545784 SIK1P57059 783 aa13.39□□□□□ -0.27
LINC00939-203ENST00000545784 TXNRD1Q16881 649 aa13.39□□□□□ -0.27
LINC00939-203ENST00000545784 ZNF496Q96IT1 587 aaPredicted RBP13.39□□□□□ -0.27
LINC00939-203ENST00000545784 EIF4A1P60842 406 aaKnown RBP13.38□□□□□ -0.27
LINC00939-203ENST00000545784 GNAI1P63096 354 aa13.38□□□□□ -0.27
LINC00939-203ENST00000545784 MBIPQ9NS73 344 aa13.38□□□□□ -0.27
LINC00939-203ENST00000545784 TSPYL4Q9UJ04 414 aa13.38□□□□□ -0.27
LINC00939-203ENST00000545784 VIRMAQ69YN4 1812 aaKnown RBP13.38□□□□□ -0.27
LINC00939-203ENST00000545784 HEG1Q9ULI3 1381 aa13.38□□□□□ -0.27
LINC00939-203ENST00000545784 KCPQ6ZWJ8 1503 aa13.38□□□□□ -0.27
LINC00939-203ENST00000545784 SLC27A3Q5K4L6 730 aa13.38□□□□□ -0.27
LINC00939-203ENST00000545784 LAS1LQ9Y4W2 734 aaKnown RBP13.38□□□□□ -0.27
LINC00939-203ENST00000545784 ITPK1Q13572 414 aa13.37□□□□□ -0.27
LINC00939-203ENST00000545784 TTC5Q8N0Z6 440 aa13.37□□□□□ -0.27
LINC00939-203ENST00000545784 VSIG10Q8N0Z9 540 aa13.37□□□□□ -0.27
LINC00939-203ENST00000545784 RBM42Q9BTD8 480 aaKnown RBP13.37□□□□□ -0.27
LINC00939-203ENST00000545784 CCNL1Q9UK58 526 aaPredicted RBP13.36□□□□□ -0.27
LINC00939-203ENST00000545784 PAPPAQ13219 1627 aa13.36□□□□□ -0.27
LINC00939-203ENST00000545784 FMNL2Q96PY5 1086 aa13.36□□□□□ -0.27
LINC00939-203ENST00000545784 ATP6V1AP38606 617 aa13.35□□□□□ -0.27
LINC00939-203ENST00000545784 TRMT2AQ8IZ69 625 aaKnown RBP13.35□□□□□ -0.27
LINC00939-203ENST00000545784 TSR2Q969E8 191 aaKnown RBP13.35□□□□□ -0.27
LINC00939-203ENST00000545784 IPO9Q96P70 1041 aaKnown RBP13.35□□□□□ -0.27
LINC00939-203ENST00000545784 PRAMEF22A3QJZ6 481 aa13.35□□□□□ -0.27
LINC00939-203ENST00000545784 GOLGA2Q08379 1002 aa13.35□□□□□ -0.27
LINC00939-203ENST00000545784 SLFN5Q08AF3 891 aa13.35□□□□□ -0.27
LINC00939-203ENST00000545784 CDCA7LQ96GN5 454 aa13.35□□□□□ -0.27
LINC00939-203ENST00000545784 GIGYF1O75420 1035 aaPredicted RBP13.34□□□□□ -0.27
LINC00939-203ENST00000545784 KRT24Q2M2I5 525 aa13.34□□□□□ -0.27
LINC00939-203ENST00000545784 DNAJC10Q8IXB1 793 aa13.34□□□□□ -0.27
LINC00939-203ENST00000545784 LINC00116Q8NCU8 138 aa13.34□□□□□ -0.27
LINC00939-203ENST00000545784 LY75O60449 1722 aa13.34□□□□□ -0.27
LINC00939-203ENST00000545784 RGPD3A6NKT7 1758 aaPredicted RBP13.33□□□□□ -0.27
LINC00939-203ENST00000545784 RGPD4Q7Z3J3 1758 aa13.33□□□□□ -0.27
LINC00939-203ENST00000545784 SNRPA1P09661 255 aaKnown RBP13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms