RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 SRCIN1Q9C0H9 1055 aa21.92■■□□□ 1.1
CCT4-204ENST00000544079 CPSF1Q10570 1443 aaKnown RBP21.91■■□□□ 1.1
CCT4-204ENST00000544079 TERF2Q15554 542 aa21.91■■□□□ 1.1
CCT4-204ENST00000544079 GGNBP2Q9H3C7 697 aa21.91■■□□□ 1.1
CCT4-204ENST00000544079 GDPD2Q9HCC8 539 aa21.91■■□□□ 1.1
CCT4-204ENST00000544079 MBIPQ9NS73 344 aa21.91■■□□□ 1.1
CCT4-204ENST00000544079 ATP6V1DQ9Y5K8 247 aa21.91■■□□□ 1.1
CCT4-204ENST00000544079 TCHHQ07283 1943 aa21.91■■□□□ 1.1
CCT4-204ENST00000544079 FYB1O15117 783 aa21.91■■□□□ 1.1
CCT4-204ENST00000544079 CDK11BP21127 795 aaKnown RBP21.9■■□□□ 1.1
CCT4-204ENST00000544079 PRKAR2BP31323 418 aa21.9■■□□□ 1.1
CCT4-204ENST00000544079 HAP1P54257 671 aaPredicted RBP21.9■■□□□ 1.1
CCT4-204ENST00000544079 FAM69CQ0P6D2 419 aa21.9■■□□□ 1.1
CCT4-204ENST00000544079 KIF3BO15066 747 aa21.9■■□□□ 1.1
CCT4-204ENST00000544079 KIF18AQ8NI77 898 aa21.9■■□□□ 1.1
CCT4-204ENST00000544079 KIF20BQ96Q89 1820 aa21.89■■□□□ 1.09
CCT4-204ENST00000544079 ZSCAN22P10073 491 aaPredicted RBP21.89■■□□□ 1.09
CCT4-204ENST00000544079 PDE1AP54750 535 aa21.89■■□□□ 1.09
CCT4-204ENST00000544079 LMOD3Q0VAK6 560 aa21.89■■□□□ 1.09
CCT4-204ENST00000544079 KRT222Q8N1A0 295 aa21.89■■□□□ 1.09
CCT4-204ENST00000544079 AP5Z1O43299 807 aa21.89■■□□□ 1.09
CCT4-204ENST00000544079 IGSF3O75054 1194 aa21.89■■□□□ 1.09
CCT4-204ENST00000544079 TERF2IPQ9NYB0 399 aa21.89■■□□□ 1.09
CCT4-204ENST00000544079 FAM53CQ9NYF3 392 aa21.89■■□□□ 1.09
CCT4-204ENST00000544079 CLTCQ00610 1675 aaKnown RBP21.88■■□□□ 1.09
CCT4-204ENST00000544079 VGFO15240 615 aaPredicted RBP21.88■■□□□ 1.09
CCT4-204ENST00000544079 HMMRO75330 724 aa21.88■■□□□ 1.09
CCT4-204ENST00000544079 TIGD1Q96MW7 591 aa21.88■■□□□ 1.09
CCT4-204ENST00000544079 AFAP1Q8N556 730 aa21.87■■□□□ 1.09
CCT4-204ENST00000544079 DNAJC2Q99543 621 aaKnown RBP21.87■■□□□ 1.09
CCT4-204ENST00000544079 CALCOCO1Q9P1Z2 691 aa21.87■■□□□ 1.09
CCT4-204ENST00000544079 CCDC192P0DO97 292 aa21.86■■□□□ 1.09
CCT4-204ENST00000544079 IRX5P78411 483 aaPredicted RBP21.86■■□□□ 1.09
CCT4-204ENST00000544079 TMEM132EQ6IEE7 984 aa21.86■■□□□ 1.09
CCT4-204ENST00000544079 CABP2Q9NPB3 220 aa21.86■■□□□ 1.09
CCT4-204ENST00000544079 CNPY2Q9Y2B0 182 aa21.86■■□□□ 1.09
CCT4-204ENST00000544079 CAMSAP1Q5T5Y3 1602 aa21.86■■□□□ 1.09
CCT4-204ENST00000544079 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.86■■□□□ 1.09
CCT4-204ENST00000544079 TSPOAP1O95153 1857 aa21.86■■□□□ 1.09
CCT4-204ENST00000544079 CD163L1Q9NR16 1453 aa21.85■■□□□ 1.09
CCT4-204ENST00000544079 CCDC112Q8NEF3 446 aa21.85■■□□□ 1.09
CCT4-204ENST00000544079 ZNF397Q8NF99 534 aaPredicted RBP21.85■■□□□ 1.09
CCT4-204ENST00000544079 PALD1Q9ULE6 856 aa21.85■■□□□ 1.09
CCT4-204ENST00000544079 KIAA0232Q92628 1395 aa21.85■■□□□ 1.09
CCT4-204ENST00000544079 FAM200AQ8TCP9 573 aa21.85■■□□□ 1.09
CCT4-204ENST00000544079 C8orf58Q8NAV2 365 aa21.84■■□□□ 1.09
CCT4-204ENST00000544079 TSPYL1Q9H0U9 437 aa21.84■■□□□ 1.09
CCT4-204ENST00000544079 SALL3Q9BXA9 1300 aa21.84■■□□□ 1.09
CCT4-204ENST00000544079 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.83■■□□□ 1.09
CCT4-204ENST00000544079 PTPRCP08575 1304 aa21.83■■□□□ 1.09
CCT4-204ENST00000544079 KCNJ4P48050 445 aa21.83■■□□□ 1.09
CCT4-204ENST00000544079 SLFNL1Q499Z3 407 aa21.83■■□□□ 1.09
CCT4-204ENST00000544079 TULP2O00295 520 aa21.82■■□□□ 1.08
CCT4-204ENST00000544079 TNNT1P13805 278 aa21.82■■□□□ 1.08
CCT4-204ENST00000544079 PLCB2Q00722 1185 aa21.82■■□□□ 1.08
CCT4-204ENST00000544079 F13A1P00488 732 aa21.82■■□□□ 1.08
CCT4-204ENST00000544079 PTGS1P23219 599 aa21.82■■□□□ 1.08
CCT4-204ENST00000544079 GIMAP6Q6P9H5 292 aa21.82■■□□□ 1.08
CCT4-204ENST00000544079 SPC24Q8NBT2 197 aa21.82■■□□□ 1.08
CCT4-204ENST00000544079 STX6O43752 255 aa21.81■■□□□ 1.08
CCT4-204ENST00000544079 CHMLP26374 656 aa21.81■■□□□ 1.08
CCT4-204ENST00000544079 RIMS2Q9UQ26 1411 aa21.81■■□□□ 1.08
CCT4-204ENST00000544079 ABCC3O15438 1527 aa21.81■■□□□ 1.08
CCT4-204ENST00000544079 ELL2O00472 640 aaPredicted RBP21.81■■□□□ 1.08
CCT4-204ENST00000544079 PHACTR3Q96KR7 559 aa21.81■■□□□ 1.08
CCT4-204ENST00000544079 FOXD4L6Q3SYB3 417 aaPredicted RBP21.8■■□□□ 1.08
CCT4-204ENST00000544079 FOXD4L3Q6VB84 417 aaPredicted RBP21.8■■□□□ 1.08
CCT4-204ENST00000544079 BCL11BQ9C0K0 894 aaPredicted RBP21.8■■□□□ 1.08
CCT4-204ENST00000544079 MSH6P52701 1360 aa21.8■■□□□ 1.08
CCT4-204ENST00000544079 DLG5Q8TDM6 1919 aa21.8■■□□□ 1.08
CCT4-204ENST00000544079 THUMPD2Q9BTF0 503 aaKnown RBP21.8■■□□□ 1.08
CCT4-204ENST00000544079 ANO2Q9NQ90 1003 aa21.8■■□□□ 1.08
CCT4-204ENST00000544079 HSPA4P34932 840 aa21.78■■□□□ 1.08
CCT4-204ENST00000544079 PIK3C2BO00750 1634 aa21.78■■□□□ 1.08
CCT4-204ENST00000544079 C16orf45Q96MC5 204 aaPredicted RBP21.78■■□□□ 1.08
CCT4-204ENST00000544079 PDIA4P13667 645 aaKnown RBP21.77■■□□□ 1.08
CCT4-204ENST00000544079 SYT1P21579 422 aa21.77■■□□□ 1.08
CCT4-204ENST00000544079 RNF20Q5VTR2 975 aa21.77■■□□□ 1.08
CCT4-204ENST00000544079 AOX1Q06278 1338 aa21.77■■□□□ 1.08
CCT4-204ENST00000544079 CCDC171Q6TFL3 1326 aa21.77■■□□□ 1.08
CCT4-204ENST00000544079 ZSCAN25Q6NSZ9 544 aa21.77■■□□□ 1.08
CCT4-204ENST00000544079 NOL8Q76FK4 1167 aaKnown RBP21.77■■□□□ 1.08
CCT4-204ENST00000544079 CCDC186Q7Z3E2 898 aa21.77■■□□□ 1.08
CCT4-204ENST00000544079 PLA2G4DQ86XP0 818 aa21.77■■□□□ 1.08
CCT4-204ENST00000544079 HDGFL2Q7Z4V5 671 aaPredicted RBP21.76■■□□□ 1.07
CCT4-204ENST00000544079 STAP2Q9UGK3 403 aa21.76■■□□□ 1.07
CCT4-204ENST00000544079 CDK12Q9NYV4 1490 aaPredicted RBP21.76■■□□□ 1.07
CCT4-204ENST00000544079 CHGAP10645 457 aaKnown RBP21.76■■□□□ 1.07
CCT4-204ENST00000544079 CDC25BP30305 580 aa21.76■■□□□ 1.07
CCT4-204ENST00000544079 FIBPO43427 364 aa21.75■■□□□ 1.07
CCT4-204ENST00000544079 AEBP1Q8IUX7 1158 aa21.75■■□□□ 1.07
CCT4-204ENST00000544079 UPF3BQ9BZI7 483 aaKnown RBP21.75■■□□□ 1.07
CCT4-204ENST00000544079 ZBTB22O15209 634 aa21.75■■□□□ 1.07
CCT4-204ENST00000544079 NEMFO60524 1076 aa21.75■■□□□ 1.07
CCT4-204ENST00000544079 SRPK2P78362 688 aaKnown RBP21.75■■□□□ 1.07
CCT4-204ENST00000544079 MAP3K11Q16584 847 aa21.75■■□□□ 1.07
CCT4-204ENST00000544079 TTC14Q96N46 770 aa21.75■■□□□ 1.07
CCT4-204ENST00000544079 MEIS3Q99687 375 aa21.75■■□□□ 1.07
CCT4-204ENST00000544079 NEXMIFQ5QGS0 1516 aa21.74■■□□□ 1.07
CCT4-204ENST00000544079 APBB1O00213 710 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms