RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 LY75O60449 1722 aa24.72■■□□□ 1.55
VPS33A-205ENST00000541169 RREB1Q92766 1687 aa24.72■■□□□ 1.55
VPS33A-205ENST00000541169 DLG5Q8TDM6 1919 aa24.71■■□□□ 1.55
VPS33A-205ENST00000541169 RIPK4P57078 832 aa24.71■■□□□ 1.55
VPS33A-205ENST00000541169 EZH2Q15910 746 aaKnown RBP24.71■■□□□ 1.55
VPS33A-205ENST00000541169 TXNRD1Q16881 649 aa24.71■■□□□ 1.55
VPS33A-205ENST00000541169 NCBP3Q53F19 620 aaKnown RBP24.71■■□□□ 1.55
VPS33A-205ENST00000541169 PALLDQ8WX93 1383 aa24.7■■□□□ 1.55
VPS33A-205ENST00000541169 CCDC146Q8IYE0 955 aa24.7■■□□□ 1.54
VPS33A-205ENST00000541169 NBPF14Q5TI25 921 aa24.69■■□□□ 1.54
VPS33A-205ENST00000541169 NGEFQ8N5V2 710 aa24.69■■□□□ 1.54
VPS33A-205ENST00000541169 ATG3Q9NT62 314 aa24.68■■□□□ 1.54
VPS33A-205ENST00000541169 ZNF831Q5JPB2 1677 aa24.68■■□□□ 1.54
VPS33A-205ENST00000541169 ASAP1Q9ULH1 1129 aa24.66■■□□□ 1.54
VPS33A-205ENST00000541169 SIPA1L3O60292 1781 aaPredicted RBP24.66■■□□□ 1.54
VPS33A-205ENST00000541169 MCM10Q7L590 875 aa24.65■■□□□ 1.54
VPS33A-205ENST00000541169 PROM2Q8N271 834 aa24.65■■□□□ 1.54
VPS33A-205ENST00000541169 BABAM1Q9NWV8 329 aa24.65■■□□□ 1.54
VPS33A-205ENST00000541169 CCNL1Q9UK58 526 aaPredicted RBP24.65■■□□□ 1.54
VPS33A-205ENST00000541169 NUP188Q5SRE5 1749 aa24.64■■□□□ 1.54
VPS33A-205ENST00000541169 CALD1Q05682 793 aaKnown RBP24.64■■□□□ 1.54
VPS33A-205ENST00000541169 TAF7Q15545 349 aaPredicted RBP24.64■■□□□ 1.54
VPS33A-205ENST00000541169 TTC5Q8N0Z6 440 aa24.64■■□□□ 1.54
VPS33A-205ENST00000541169 LOC102724428A0A0B4J2F2 783 aa24.63■■□□□ 1.53
VPS33A-205ENST00000541169 APAF1O14727 1248 aa24.63■■□□□ 1.53
VPS33A-205ENST00000541169 SIK1P57059 783 aa24.63■■□□□ 1.53
VPS33A-205ENST00000541169 FAM9BQ8IZU0 186 aa24.63■■□□□ 1.53
VPS33A-205ENST00000541169 PAPPAQ13219 1627 aa24.62■■□□□ 1.53
VPS33A-205ENST00000541169 BTBD11A6QL63 1104 aa24.61■■□□□ 1.53
VPS33A-205ENST00000541169 NEUROD2Q15784 382 aa24.61■■□□□ 1.53
VPS33A-205ENST00000541169 CCDC27Q2M243 656 aa24.61■■□□□ 1.53
VPS33A-205ENST00000541169 ZNF790Q6PG37 636 aa24.61■■□□□ 1.53
VPS33A-205ENST00000541169 VSIG10Q8N0Z9 540 aa24.61■■□□□ 1.53
VPS33A-205ENST00000541169 MIER1Q8N108 512 aa24.61■■□□□ 1.53
VPS33A-205ENST00000541169 DCTN1Q14203 1278 aa24.59■■□□□ 1.53
VPS33A-205ENST00000541169 CICQ96RK0 1608 aaPredicted RBP24.58■■□□□ 1.53
VPS33A-205ENST00000541169 ATP6V1AP38606 617 aa24.58■■□□□ 1.53
VPS33A-205ENST00000541169 RBM42Q9BTD8 480 aaKnown RBP24.58■■□□□ 1.53
VPS33A-205ENST00000541169 LRRC4BQ9NT99 713 aa24.58■■□□□ 1.53
VPS33A-205ENST00000541169 STK32BQ9NY57 414 aa24.58■■□□□ 1.53
VPS33A-205ENST00000541169 TRIM35Q9UPQ4 493 aa24.58■■□□□ 1.53
VPS33A-205ENST00000541169 RRP7AQ9Y3A4 280 aaKnown RBP24.58■■□□□ 1.53
VPS33A-205ENST00000541169 UBR2Q8IWV8 1755 aa24.57■■□□□ 1.52
VPS33A-205ENST00000541169 TEX13AQ9BXU3 409 aaPredicted RBP24.57■■□□□ 1.52
VPS33A-205ENST00000541169 C5P01031 1676 aa24.56■■□□□ 1.52
VPS33A-205ENST00000541169 PTCD1O75127 700 aaKnown RBP24.55■■□□□ 1.52
VPS33A-205ENST00000541169 FMNL2Q96PY5 1086 aa24.55■■□□□ 1.52
VPS33A-205ENST00000541169 TAF1LQ8IZX4 1826 aa24.55■■□□□ 1.52
VPS33A-205ENST00000541169 SLC39A6Q13433 755 aa24.54■■□□□ 1.52
VPS33A-205ENST00000541169 KCPQ6ZWJ8 1503 aa24.53■■□□□ 1.52
VPS33A-205ENST00000541169 SLC15A2Q16348 729 aa24.53■■□□□ 1.52
VPS33A-205ENST00000541169 RC3H1Q5TC82 1133 aaKnown RBP24.52■■□□□ 1.52
VPS33A-205ENST00000541169 FLAD1Q8NFF5 587 aa24.51■■□□□ 1.51
VPS33A-205ENST00000541169 AKT1S1Q96B36 256 aa24.51■■□□□ 1.51
VPS33A-205ENST00000541169 CFAP44Q96MT7 982 aa24.51■■□□□ 1.51
VPS33A-205ENST00000541169 THUMPD2Q9BTF0 503 aaKnown RBP24.51■■□□□ 1.51
VPS33A-205ENST00000541169 HEG1Q9ULI3 1381 aa24.51■■□□□ 1.51
VPS33A-205ENST00000541169 KDM3BQ7LBC6 1761 aa24.5■■□□□ 1.51
VPS33A-205ENST00000541169 ZNF496Q96IT1 587 aaPredicted RBP24.5■■□□□ 1.51
VPS33A-205ENST00000541169 C4BP0C0L5 1744 aa24.49■■□□□ 1.51
VPS33A-205ENST00000541169 QSER1Q2KHR3 1735 aa24.49■■□□□ 1.51
VPS33A-205ENST00000541169 CHL1O00533 1208 aa24.49■■□□□ 1.51
VPS33A-205ENST00000541169 STARD3NLO95772 234 aa24.49■■□□□ 1.51
VPS33A-205ENST00000541169 GNAI1P63096 354 aa24.49■■□□□ 1.51
VPS33A-205ENST00000541169 AK7Q96M32 723 aa24.49■■□□□ 1.51
VPS33A-205ENST00000541169 IFT57Q9NWB7 429 aa24.49■■□□□ 1.51
VPS33A-205ENST00000541169 TSPYL4Q9UJ04 414 aa24.49■■□□□ 1.51
VPS33A-205ENST00000541169 CNTNAP4Q9C0A0 1308 aa24.49■■□□□ 1.51
VPS33A-205ENST00000541169 COL5A3P25940 1745 aaPredicted RBP24.49■■□□□ 1.51
VPS33A-205ENST00000541169 SNRPA1P09661 255 aaKnown RBP24.48■■□□□ 1.51
VPS33A-205ENST00000541169 ITPK1Q13572 414 aa24.48■■□□□ 1.51
VPS33A-205ENST00000541169 IL16Q14005 1332 aa24.48■■□□□ 1.51
VPS33A-205ENST00000541169 WWC1Q8IX03 1113 aa24.48■■□□□ 1.51
VPS33A-205ENST00000541169 SLC4A9Q96Q91 983 aa24.48■■□□□ 1.51
VPS33A-205ENST00000541169 TFCP2L1Q9NZI6 479 aa24.48■■□□□ 1.51
VPS33A-205ENST00000541169 KCNQ4P56696 695 aa24.47■■□□□ 1.51
VPS33A-205ENST00000541169 WDR63Q8IWG1 891 aa24.47■■□□□ 1.51
VPS33A-205ENST00000541169 R3HDM1Q15032 1099 aaKnown RBP24.46■■□□□ 1.51
VPS33A-205ENST00000541169 LINC00116Q8NCU8 138 aa24.46■■□□□ 1.51
VPS33A-205ENST00000541169 ANO8Q9HCE9 1232 aaPredicted RBP24.46■■□□□ 1.51
VPS33A-205ENST00000541169 TJP1Q07157 1748 aa24.46■■□□□ 1.51
VPS33A-205ENST00000541169 ZNF853P0CG23 659 aa24.44■■□□□ 1.5
VPS33A-205ENST00000541169 ADRA2BP18089 450 aa24.44■■□□□ 1.5
VPS33A-205ENST00000541169 SSFA2P28290 1259 aa24.44■■□□□ 1.5
VPS33A-205ENST00000541169 CHMP4AQ9BY43 222 aa24.44■■□□□ 1.5
VPS33A-205ENST00000541169 EIF4A1P60842 406 aaKnown RBP24.43■■□□□ 1.5
VPS33A-205ENST00000541169 ZNF827Q17R98 1081 aa24.43■■□□□ 1.5
VPS33A-205ENST00000541169 DNAJC10Q8IXB1 793 aa24.43■■□□□ 1.5
VPS33A-205ENST00000541169 MIS18AQ9NYP9 233 aa24.43■■□□□ 1.5
VPS33A-205ENST00000541169 KCNQ3O43525 872 aa24.42■■□□□ 1.5
VPS33A-205ENST00000541169 CYP19A1P11511 503 aaPredicted RBP24.42■■□□□ 1.5
VPS33A-205ENST00000541169 SLC16A10Q8TF71 515 aa24.42■■□□□ 1.5
VPS33A-205ENST00000541169 RTCBQ9Y3I0 505 aaKnown RBP24.42■■□□□ 1.5
VPS33A-205ENST00000541169 LAS1LQ9Y4W2 734 aaKnown RBP24.42■■□□□ 1.5
VPS33A-205ENST00000541169 CRKLP46109 303 aaKnown RBP24.41■■□□□ 1.5
VPS33A-205ENST00000541169 CCDC87Q9NVE4 849 aa24.41■■□□□ 1.5
VPS33A-205ENST00000541169 SOS1Q07889 1333 aaPredicted RBP24.4■■□□□ 1.5
VPS33A-205ENST00000541169 GNPATO15228 680 aa24.4■■□□□ 1.5
VPS33A-205ENST00000541169 GIGYF1O75420 1035 aaPredicted RBP24.4■■□□□ 1.5
VPS33A-205ENST00000541169 RPS6KA4O75676 772 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms