RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 OPA1O60313 960 aa8.04□□□□□ -1.12
SORT1-209ENST00000538502 HMOX1P09601 288 aa8.04□□□□□ -1.12
SORT1-209ENST00000538502 SOGA3Q5TF21 947 aa8.04□□□□□ -1.12
SORT1-209ENST00000538502 ATAD2BQ9ULI0 1458 aa8.04□□□□□ -1.12
SORT1-209ENST00000538502 LMAN1P49257 510 aa8.04□□□□□ -1.12
SORT1-209ENST00000538502 MNAT1P51948 309 aa8.04□□□□□ -1.12
SORT1-209ENST00000538502 PLEKHO1Q53GL0 409 aaPredicted RBP8.04□□□□□ -1.12
SORT1-209ENST00000538502 TICAM2Q86XR7 235 aa8.04□□□□□ -1.12
SORT1-209ENST00000538502 BBXQ8WY36 941 aaPredicted RBP8.04□□□□□ -1.12
SORT1-209ENST00000538502 KIF20AO95235 890 aa8.04□□□□□ -1.12
SORT1-209ENST00000538502 FAM114A1Q8IWE2 563 aa8.04□□□□□ -1.12
SORT1-209ENST00000538502 CEP112Q8N8E3 955 aa8.04□□□□□ -1.12
SORT1-209ENST00000538502 GOLIM4O00461 696 aa8.03□□□□□ -1.12
SORT1-209ENST00000538502 RAD21O60216 631 aa8.03□□□□□ -1.12
SORT1-209ENST00000538502 CASTP20810 708 aaKnown RBP8.03□□□□□ -1.12
SORT1-209ENST00000538502 STK3Q13188 491 aa8.03□□□□□ -1.12
SORT1-209ENST00000538502 IFI16Q16666 785 aaKnown RBP8.03□□□□□ -1.12
SORT1-209ENST00000538502 ZSCAN23Q3MJ62 389 aa8.03□□□□□ -1.12
SORT1-209ENST00000538502 KIF6Q6ZMV9 814 aa8.03□□□□□ -1.12
SORT1-209ENST00000538502 RAPGEF4Q8WZA2 1011 aa8.03□□□□□ -1.12
SORT1-209ENST00000538502 DNAI2Q9GZS0 605 aa8.03□□□□□ -1.12
SORT1-209ENST00000538502 PRKAR2BP31323 418 aa8.03□□□□□ -1.12
SORT1-209ENST00000538502 TTC31Q49AM3 519 aaPredicted RBP8.03□□□□□ -1.12
SORT1-209ENST00000538502 STMN4Q9H169 189 aaPredicted RBP8.03□□□□□ -1.12
SORT1-209ENST00000538502 LIMCH1Q9UPQ0 1083 aa8.03□□□□□ -1.12
SORT1-209ENST00000538502 PTPRGP23470 1445 aa8.03□□□□□ -1.12
SORT1-209ENST00000538502 JPH4Q96JJ6 628 aa8.03□□□□□ -1.12
SORT1-209ENST00000538502 TBC1D32Q96NH3 1257 aa8.03□□□□□ -1.12
SORT1-209ENST00000538502 ARFGAP3Q9NP61 516 aa8.03□□□□□ -1.12
SORT1-209ENST00000538502 ZKSCAN5Q9Y2L8 839 aa8.03□□□□□ -1.12
SORT1-209ENST00000538502 EVA1CP58658 441 aa8.03□□□□□ -1.12
SORT1-209ENST00000538502 GLRX3O76003 335 aaKnown RBP8.03□□□□□ -1.12
SORT1-209ENST00000538502 BAG4O95429 457 aaKnown RBP8.03□□□□□ -1.12
SORT1-209ENST00000538502 NOLC1Q14978 699 aaKnown RBP eCLIP8.03□□□□□ -1.123e-7■■■□□ 14.6
SORT1-209ENST00000538502 NUTM2DQ5VT03 806 aaPredicted RBP8.03□□□□□ -1.12
SORT1-209ENST00000538502 ZHX1Q9UKY1 873 aaPredicted RBP8.03□□□□□ -1.12
SORT1-209ENST00000538502 A6NNZ2 444 aa8.02□□□□□ -1.12
SORT1-209ENST00000538502 FCHSD2O94868 740 aa8.02□□□□□ -1.12
SORT1-209ENST00000538502 TUBB8Q3ZCM7 444 aa8.02□□□□□ -1.12
SORT1-209ENST00000538502 SNX21Q969T3 373 aa8.02□□□□□ -1.12
SORT1-209ENST00000538502 C16orf45Q96MC5 204 aaPredicted RBP8.02□□□□□ -1.12
SORT1-209ENST00000538502 U3KPZ7 1027 aaPredicted RBP8.02□□□□□ -1.12
SORT1-209ENST00000538502 KIF1BPQ96EK5 621 aa8.02□□□□□ -1.13
SORT1-209ENST00000538502 C1orf115Q9H7X2 142 aa8.02□□□□□ -1.13
SORT1-209ENST00000538502 USP25Q9UHP3 1055 aa8.02□□□□□ -1.13
SORT1-209ENST00000538502 CCDC196A0A1B0GTZ2 297 aa8.02□□□□□ -1.13
SORT1-209ENST00000538502 SLC4A2P04920 1241 aa8.02□□□□□ -1.13
SORT1-209ENST00000538502 CEP63Q96MT8 703 aa8.02□□□□□ -1.13
SORT1-209ENST00000538502 BMP2KLQ5H9B9 411 aa8.02□□□□□ -1.13
SORT1-209ENST00000538502 FANCD2Q9BXW9 1451 aa8.02□□□□□ -1.13
SORT1-209ENST00000538502 ZSCAN16Q9H4T2 348 aaPredicted RBP8.02□□□□□ -1.13
SORT1-209ENST00000538502 SSFA2P28290 1259 aa8.02□□□□□ -1.13
SORT1-209ENST00000538502 CTAGE1Q96RT6 745 aa8.02□□□□□ -1.13
SORT1-209ENST00000538502 ZNF692Q9BU19 519 aaPredicted RBP8.02□□□□□ -1.13
SORT1-209ENST00000538502 ARAP1Q96P48 1450 aa8.01□□□□□ -1.13
SORT1-209ENST00000538502 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.01□□□□□ -1.139e-8■□□□□ 10.8
SORT1-209ENST00000538502 PIP4K2BP78356 416 aa8.01□□□□□ -1.13
SORT1-209ENST00000538502 GAPVD1Q14C86 1478 aa8.01□□□□□ -1.13
SORT1-209ENST00000538502 CCDC141Q6ZP82 1450 aa8.01□□□□□ -1.13
SORT1-209ENST00000538502 ATP2B1P20020 1258 aa8.01□□□□□ -1.13
SORT1-209ENST00000538502 MX1P20591 662 aa8.01□□□□□ -1.13
SORT1-209ENST00000538502 CAMK4Q16566 473 aa8.01□□□□□ -1.13
SORT1-209ENST00000538502 GGNBP2Q9H3C7 697 aa8.01□□□□□ -1.13
SORT1-209ENST00000538502 IGF1RP08069 1367 aa8.01□□□□□ -1.13
SORT1-209ENST00000538502 ATAD2Q6PL18 1390 aa8.01□□□□□ -1.13
SORT1-209ENST00000538502 SLU7O95391 586 aaKnown RBP8.01□□□□□ -1.13
SORT1-209ENST00000538502 TUBB2AQ13885 445 aa8.01□□□□□ -1.13
SORT1-209ENST00000538502 ANKS4BQ8N8V4 417 aa8.01□□□□□ -1.13
SORT1-209ENST00000538502 TUBB2BQ9BVA1 445 aa8.01□□□□□ -1.13
SORT1-209ENST00000538502 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.01□□□□□ -1.13
SORT1-209ENST00000538502 AACSQ86V21 672 aa8□□□□□ -1.13
SORT1-209ENST00000538502 CTCFLQ8NI51 663 aaPredicted RBP8□□□□□ -1.13
SORT1-209ENST00000538502 NUP88Q99567 741 aaPredicted RBP8□□□□□ -1.13
SORT1-209ENST00000538502 RAI14Q9P0K7 980 aa8□□□□□ -1.13
SORT1-209ENST00000538502 MAP3K1Q13233 1512 aa8□□□□□ -1.13
SORT1-209ENST00000538502 A0A1B0GUL7 405 aa8□□□□□ -1.13
SORT1-209ENST00000538502 NBPF11Q86T75 865 aa8□□□□□ -1.13
SORT1-209ENST00000538502 RPGRIP1LQ68CZ1 1315 aa8□□□□□ -1.13
SORT1-209ENST00000538502 TRIM21P19474 475 aaKnown RBP8□□□□□ -1.13
SORT1-209ENST00000538502 PSME1Q06323 249 aa8□□□□□ -1.13
SORT1-209ENST00000538502 CCDC178Q5BJE1 867 aa8□□□□□ -1.13
SORT1-209ENST00000538502 GOLGA1Q92805 767 aa8□□□□□ -1.13
SORT1-209ENST00000538502 CFAP57Q96MR6 1250 aa8□□□□□ -1.13
SORT1-209ENST00000538502 GABPB1Q06547 395 aaPredicted RBP8□□□□□ -1.13
SORT1-209ENST00000538502 CACNA2D4Q7Z3S7 1137 aa8□□□□□ -1.13
SORT1-209ENST00000538502 TMC6Q7Z403 805 aa8□□□□□ -1.13
SORT1-209ENST00000538502 HOOK3Q86VS8 718 aa8□□□□□ -1.13
SORT1-209ENST00000538502 CCDC50Q8IVM0 306 aa8□□□□□ -1.13
SORT1-209ENST00000538502 UBAC1Q9BSL1 405 aa8□□□□□ -1.13
SORT1-209ENST00000538502 RASSF4Q9H2L5 321 aa8□□□□□ -1.13
SORT1-209ENST00000538502 ARHGAP5Q13017 1502 aa8□□□□□ -1.13
SORT1-209ENST00000538502 MSL1Q68DK7 614 aa8□□□□□ -1.13
SORT1-209ENST00000538502 CWC27Q6UX04 472 aaKnown RBP8□□□□□ -1.13
SORT1-209ENST00000538502 CCDC155Q8N6L0 562 aa8□□□□□ -1.13
SORT1-209ENST00000538502 FGD5Q6ZNL6 1462 aa8□□□□□ -1.13
SORT1-209ENST00000538502 HDGFL1Q5TGJ6 251 aa8□□□□□ -1.13
SORT1-209ENST00000538502 STX6O43752 255 aa7.99□□□□□ -1.13
SORT1-209ENST00000538502 SETSIPP0DME0 302 aa7.99□□□□□ -1.13
SORT1-209ENST00000538502 AIMP1Q12904 312 aaKnown RBP7.99□□□□□ -1.13
SORT1-209ENST00000538502 MPNDQ8N594 471 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms