RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 STK31Q9BXU1 1019 aa23.61■■□□□ 1.37
CAPN1-226ENST00000533820 NAP1L2Q9ULW6 460 aaPredicted RBP23.61■■□□□ 1.37
CAPN1-226ENST00000533820 CLEC17AQ6ZS10 378 aa23.6■■□□□ 1.37
CAPN1-226ENST00000533820 GNAI2P04899 355 aa23.6■■□□□ 1.37
CAPN1-226ENST00000533820 IL1RAPL2Q9NP60 686 aa23.6■■□□□ 1.37
CAPN1-226ENST00000533820 MAP4K4O95819 1239 aaPredicted RBP23.59■■□□□ 1.37
CAPN1-226ENST00000533820 TMX3Q96JJ7 454 aa23.59■■□□□ 1.37
CAPN1-226ENST00000533820 TPM2P07951 284 aa23.59■■□□□ 1.37
CAPN1-226ENST00000533820 RNF214Q8ND24 703 aa23.59■■□□□ 1.37
CAPN1-226ENST00000533820 SYCE3A1L190 88 aa23.58■■□□□ 1.37
CAPN1-226ENST00000533820 KIAA0232Q92628 1395 aa23.58■■□□□ 1.36
CAPN1-226ENST00000533820 KIAA1211Q6ZU35 1233 aa23.57■■□□□ 1.36
CAPN1-226ENST00000533820 CWC22Q9HCG8 908 aaKnown RBP23.57■■□□□ 1.36
CAPN1-226ENST00000533820 NGDNQ8NEJ9 315 aaKnown RBP23.57■■□□□ 1.36
CAPN1-226ENST00000533820 FAM13BQ9NYF5 915 aa23.57■■□□□ 1.36
CAPN1-226ENST00000533820 CCT4P50991 539 aaKnown RBP23.56■■□□□ 1.36
CAPN1-226ENST00000533820 UNC5CLQ8IV45 518 aa23.56■■□□□ 1.36
CAPN1-226ENST00000533820 EYA1Q99502 592 aa23.56■■□□□ 1.36
CAPN1-226ENST00000533820 LRRCC1Q9C099 1032 aa23.56■■□□□ 1.36
CAPN1-226ENST00000533820 CRB1P82279 1406 aa23.56■■□□□ 1.36
CAPN1-226ENST00000533820 DTNBO60941 627 aa23.56■■□□□ 1.36
CAPN1-226ENST00000533820 GDPD2Q9HCC8 539 aa23.56■■□□□ 1.36
CAPN1-226ENST00000533820 MX1P20591 662 aa23.56■■□□□ 1.36
CAPN1-226ENST00000533820 MSNP26038 577 aaKnown RBP23.56■■□□□ 1.36
CAPN1-226ENST00000533820 GTF2E1P29083 439 aaPredicted RBP23.56■■□□□ 1.36
CAPN1-226ENST00000533820 FLIIQ13045 1269 aa23.56■■□□□ 1.36
CAPN1-226ENST00000533820 TMEM63CQ9P1W3 806 aa23.56■■□□□ 1.36
CAPN1-226ENST00000533820 LRRFIP2Q9Y608 721 aaKnown RBP23.56■■□□□ 1.36
CAPN1-226ENST00000533820 SETD1AO15047 1707 aaKnown RBP23.55■■□□□ 1.36
CAPN1-226ENST00000533820 ZBTB7CA1YPR0 619 aa23.55■■□□□ 1.36
CAPN1-226ENST00000533820 ESYT1Q9BSJ8 1104 aa23.55■■□□□ 1.36
CAPN1-226ENST00000533820 HDGFP51858 240 aaKnown RBP23.54■■□□□ 1.36
CAPN1-226ENST00000533820 PPP1R9BQ96SB3 815 aa23.54■■□□□ 1.36
CAPN1-226ENST00000533820 LARP6Q9BRS8 491 aaKnown RBP23.54■■□□□ 1.36
CAPN1-226ENST00000533820 NUTM1Q86Y26 1132 aa23.54■■□□□ 1.36
CAPN1-226ENST00000533820 NRXN3Q9Y4C0 1643 aa23.54■■□□□ 1.36
CAPN1-226ENST00000533820 ZNF445P59923 1031 aa23.53■■□□□ 1.36
CAPN1-226ENST00000533820 ZSCAN30Q86W11 494 aa23.53■■□□□ 1.36
CAPN1-226ENST00000533820 LTKP29376 864 aa23.53■■□□□ 1.36
CAPN1-226ENST00000533820 RIMS1Q86UR5 1692 aaKnown RBP23.52■■□□□ 1.36
CAPN1-226ENST00000533820 CEBPAP49715 358 aaPredicted RBP23.51■■□□□ 1.35
CAPN1-226ENST00000533820 C14orf37Q86TY3 774 aa23.51■■□□□ 1.35
CAPN1-226ENST00000533820 USHBP1Q8N6Y0 703 aa23.51■■□□□ 1.35
CAPN1-226ENST00000533820 IL25Q9H293 177 aa23.51■■□□□ 1.35
CAPN1-226ENST00000533820 MPNDQ8N594 471 aa23.51■■□□□ 1.35
CAPN1-226ENST00000533820 PPP6R1Q9UPN7 881 aa23.51■■□□□ 1.35
CAPN1-226ENST00000533820 SPATA31D1Q6ZQQ2 1576 aa23.5■■□□□ 1.35
CAPN1-226ENST00000533820 C3P01024 1663 aa23.5■■□□□ 1.35
CAPN1-226ENST00000533820 MON2Q7Z3U7 1717 aa23.5■■□□□ 1.35
CAPN1-226ENST00000533820 REREQ9P2R6 1566 aa23.5■■□□□ 1.35
CAPN1-226ENST00000533820 CHMLP26374 656 aa23.5■■□□□ 1.35
CAPN1-226ENST00000533820 EIF2S2P20042 333 aaKnown RBP23.49■■□□□ 1.35
CAPN1-226ENST00000533820 NLRP6P59044 892 aa23.49■■□□□ 1.35
CAPN1-226ENST00000533820 USP6P35125 1406 aa23.49■■□□□ 1.35
CAPN1-226ENST00000533820 PAXIP1Q6ZW49 1069 aaPredicted RBP23.49■■□□□ 1.35
CAPN1-226ENST00000533820 OSBPL3Q9H4L5 887 aa23.48■■□□□ 1.35
CAPN1-226ENST00000533820 OVOS2A0A0J9YW53 1432 aa23.48■■□□□ 1.35
CAPN1-226ENST00000533820 OVOS2Q6IE36 1432 aa23.48■■□□□ 1.35
CAPN1-226ENST00000533820 ITSN1Q15811 1721 aa23.48■■□□□ 1.35
CAPN1-226ENST00000533820 MCCP23508 829 aa23.48■■□□□ 1.35
CAPN1-226ENST00000533820 PHAXQ9H814 394 aaKnown RBP23.48■■□□□ 1.35
CAPN1-226ENST00000533820 PLEKHG3A1L390 1219 aa23.48■■□□□ 1.35
CAPN1-226ENST00000533820 XPCQ01831 940 aaPredicted RBP23.48■■□□□ 1.35
CAPN1-226ENST00000533820 CCDC30Q5VVM6 783 aa23.48■■□□□ 1.35
CAPN1-226ENST00000533820 PEAK1Q9H792 1746 aa23.47■■□□□ 1.35
CAPN1-226ENST00000533820 IBTKQ9P2D0 1353 aaPredicted RBP23.47■■□□□ 1.35
CAPN1-226ENST00000533820 GNAI3P08754 354 aa23.47■■□□□ 1.35
CAPN1-226ENST00000533820 ATP8B2P98198 1209 aa23.46■■□□□ 1.35
CAPN1-226ENST00000533820 SURF6O75683 361 aaKnown RBP23.45■■□□□ 1.34
CAPN1-226ENST00000533820 UBTFL1P0CB47 393 aaPredicted RBP23.45■■□□□ 1.34
CAPN1-226ENST00000533820 TNRQ92752 1358 aa23.45■■□□□ 1.34
CAPN1-226ENST00000533820 TMEM2Q9UHN6 1383 aa23.45■■□□□ 1.34
CAPN1-226ENST00000533820 SIRT1Q96EB6 747 aa23.44■■□□□ 1.34
CAPN1-226ENST00000533820 USP44Q9H0E7 712 aa23.44■■□□□ 1.34
CAPN1-226ENST00000533820 AMOTL2Q9Y2J4 779 aa23.44■■□□□ 1.34
CAPN1-226ENST00000533820 GNAT3A8MTJ3 354 aa23.44■■□□□ 1.34
CAPN1-226ENST00000533820 ANXA1P04083 346 aa23.44■■□□□ 1.34
CAPN1-226ENST00000533820 IL17REQ8NFR9 667 aa23.44■■□□□ 1.34
CAPN1-226ENST00000533820 R3HCC1Q9Y3T6 440 aaKnown RBP23.44■■□□□ 1.34
CAPN1-226ENST00000533820 GADD45BO75293 160 aaPredicted RBP23.43■■□□□ 1.34
CAPN1-226ENST00000533820 SALL3Q9BXA9 1300 aa23.43■■□□□ 1.34
CAPN1-226ENST00000533820 AKAP12Q02952 1782 aa23.43■■□□□ 1.34
CAPN1-226ENST00000533820 LRSAM1Q6UWE0 723 aa23.43■■□□□ 1.34
CAPN1-226ENST00000533820 HDGFL1Q5TGJ6 251 aa23.42■■□□□ 1.34
CAPN1-226ENST00000533820 FLT4P35916 1363 aa23.42■■□□□ 1.34
CAPN1-226ENST00000533820 CEP170BQ9Y4F5 1589 aaPredicted RBP23.42■■□□□ 1.34
CAPN1-226ENST00000533820 BRD1O95696 1058 aa23.41■■□□□ 1.34
CAPN1-226ENST00000533820 TAF7LQ5H9L4 462 aa23.41■■□□□ 1.34
CAPN1-226ENST00000533820 PPP1R42Q7Z4L9 355 aa23.41■■□□□ 1.34
CAPN1-226ENST00000533820 TECPR2O15040 1411 aa23.41■■□□□ 1.34
CAPN1-226ENST00000533820 ARHGEF10O15013 1369 aa23.41■■□□□ 1.34
CAPN1-226ENST00000533820 CPA1P15085 419 aa23.4■■□□□ 1.34
CAPN1-226ENST00000533820 NRKQ7Z2Y5 1582 aa23.4■■□□□ 1.34
CAPN1-226ENST00000533820 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.4■■□□□ 1.34
CAPN1-226ENST00000533820 ADAMTS13Q76LX8 1427 aa23.39■■□□□ 1.34
CAPN1-226ENST00000533820 PLCD3Q8N3E9 789 aa23.39■■□□□ 1.33
CAPN1-226ENST00000533820 DDX54Q8TDD1 881 aaKnown RBP23.39■■□□□ 1.33
CAPN1-226ENST00000533820 SRGAP3O43295 1099 aa23.39■■□□□ 1.33
CAPN1-226ENST00000533820 IGSF1Q8N6C5 1336 aa23.38■■□□□ 1.33
CAPN1-226ENST00000533820 SPG7Q9UQ90 795 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms