RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 PLEKHG3A1L390 1219 aa19.03■□□□□ 0.64
PPFIA1-222ENST00000532504 FOSBP53539 338 aa19.03■□□□□ 0.64
PPFIA1-222ENST00000532504 UBE3BQ7Z3V4 1068 aa19.03■□□□□ 0.64
PPFIA1-222ENST00000532504 ADGBQ8N7X0 1667 aa19.03■□□□□ 0.64
PPFIA1-222ENST00000532504 ATP2B2Q01814 1243 aa19.03■□□□□ 0.64
PPFIA1-222ENST00000532504 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.03■□□□□ 0.642e-6■■■□□ 16.2
PPFIA1-222ENST00000532504 ALDH1L2Q3SY69 923 aa19.02■□□□□ 0.64
PPFIA1-222ENST00000532504 XAGE3Q8WTP9 111 aa19.02■□□□□ 0.64
PPFIA1-222ENST00000532504 DCAF5Q96JK2 942 aa19.02■□□□□ 0.64
PPFIA1-222ENST00000532504 ZSCAN29Q8IWY8 852 aaPredicted RBP19.02■□□□□ 0.64
PPFIA1-222ENST00000532504 LRP2BPQ9P2M1 347 aa19.02■□□□□ 0.64
PPFIA1-222ENST00000532504 PCDH11XQ9BZA7 1347 aa19.02■□□□□ 0.64
PPFIA1-222ENST00000532504 PCDH11YQ9BZA8 1340 aa19.02■□□□□ 0.64
PPFIA1-222ENST00000532504 ANKRD13DQ6ZTN6 518 aa19.02■□□□□ 0.63
PPFIA1-222ENST00000532504 COPS6Q7L5N1 327 aa19.02■□□□□ 0.63
PPFIA1-222ENST00000532504 NUTM1Q86Y26 1132 aa19.02■□□□□ 0.63
PPFIA1-222ENST00000532504 EDC4Q6P2E9 1401 aaKnown RBP19.01■□□□□ 0.63
PPFIA1-222ENST00000532504 LRRFIP2Q9Y608 721 aaKnown RBP19.01■□□□□ 0.63
PPFIA1-222ENST00000532504 C6orf229H3BNL8 230 aa19.01■□□□□ 0.63
PPFIA1-222ENST00000532504 IDH1O75874 414 aaKnown RBP19.01■□□□□ 0.63
PPFIA1-222ENST00000532504 GZF1Q9H116 711 aaPredicted RBP19.01■□□□□ 0.63
PPFIA1-222ENST00000532504 NLRP1Q9C000 1473 aa19■□□□□ 0.63
PPFIA1-222ENST00000532504 CWC25Q9NXE8 425 aaPredicted RBP19■□□□□ 0.63
PPFIA1-222ENST00000532504 TRIM29Q14134 588 aa19■□□□□ 0.63
PPFIA1-222ENST00000532504 ROBO2Q9HCK4 1378 aa19■□□□□ 0.63
PPFIA1-222ENST00000532504 RPAP2Q8IXW5 612 aaPredicted RBP19■□□□□ 0.63
PPFIA1-222ENST00000532504 PPP1R42Q7Z4L9 355 aa18.99■□□□□ 0.63
PPFIA1-222ENST00000532504 TCEAL9Q9UHQ7 104 aa18.99■□□□□ 0.63
PPFIA1-222ENST00000532504 ANKRD18BA2A2Z9 1011 aa18.99■□□□□ 0.63
PPFIA1-222ENST00000532504 SETDB2Q96T68 719 aa18.99■□□□□ 0.63
PPFIA1-222ENST00000532504 NBPF14Q5TI25 921 aa18.99■□□□□ 0.63
PPFIA1-222ENST00000532504 KRT24Q2M2I5 525 aa18.98■□□□□ 0.63
PPFIA1-222ENST00000532504 RTCBQ9Y3I0 505 aaKnown RBP18.98■□□□□ 0.63
PPFIA1-222ENST00000532504 PRIM1P49642 420 aaKnown RBP18.98■□□□□ 0.63
PPFIA1-222ENST00000532504 C20orf194Q5TEA3 1177 aa18.98■□□□□ 0.63
PPFIA1-222ENST00000532504 IFIT1P09914 478 aaKnown RBP18.98■□□□□ 0.63
PPFIA1-222ENST00000532504 DDX46Q7L014 1031 aaKnown RBP18.98■□□□□ 0.63
PPFIA1-222ENST00000532504 RNMTO43148 476 aaKnown RBP18.97■□□□□ 0.63
PPFIA1-222ENST00000532504 C8orf58Q8NAV2 365 aa18.97■□□□□ 0.63
PPFIA1-222ENST00000532504 CAVIN4Q5BKX8 364 aa18.97■□□□□ 0.63
PPFIA1-222ENST00000532504 CHMP4CQ96CF2 233 aa18.97■□□□□ 0.63
PPFIA1-222ENST00000532504 CDCA7Q9BWT1 371 aaPredicted RBP18.97■□□□□ 0.63
PPFIA1-222ENST00000532504 PRDM15P57071 1507 aaPredicted RBP18.97■□□□□ 0.63
PPFIA1-222ENST00000532504 NIP7Q9Y221 180 aaKnown RBP eCLIP18.97■□□□□ 0.63
PPFIA1-222ENST00000532504 SBNO1A3KN83 1393 aa18.97■□□□□ 0.63
PPFIA1-222ENST00000532504 SMARCA5O60264 1052 aaPredicted RBP18.96■□□□□ 0.63
PPFIA1-222ENST00000532504 GNPATO15228 680 aa18.96■□□□□ 0.63
PPFIA1-222ENST00000532504 TRIM27P14373 513 aa18.96■□□□□ 0.63
PPFIA1-222ENST00000532504 ABCC3O15438 1527 aa18.96■□□□□ 0.63
PPFIA1-222ENST00000532504 ST5P78524 1137 aa18.96■□□□□ 0.63
PPFIA1-222ENST00000532504 CCNL1Q9UK58 526 aaPredicted RBP18.96■□□□□ 0.63
PPFIA1-222ENST00000532504 MAP3K5Q99683 1374 aa18.96■□□□□ 0.62
PPFIA1-222ENST00000532504 SLC3A2P08195 630 aaKnown RBP18.95■□□□□ 0.62
PPFIA1-222ENST00000532504 DZIP3Q86Y13 1208 aaKnown RBP18.95■□□□□ 0.62
PPFIA1-222ENST00000532504 CREBRFQ8IUR6 639 aa18.95■□□□□ 0.62
PPFIA1-222ENST00000532504 PER1O15534 1290 aaPredicted RBP18.95■□□□□ 0.62
PPFIA1-222ENST00000532504 LDHAL6AQ6ZMR3 332 aa18.95■□□□□ 0.62
PPFIA1-222ENST00000532504 CCDC34Q96HJ3 373 aa18.95■□□□□ 0.62
PPFIA1-222ENST00000532504 NKTRP30414 1462 aaKnown RBP18.95■□□□□ 0.62
PPFIA1-222ENST00000532504 HIP1O00291 1037 aa18.94■□□□□ 0.62
PPFIA1-222ENST00000532504 CHD1LQ86WJ1 897 aa18.94■□□□□ 0.62
PPFIA1-222ENST00000532504 CCDC8Q9H0W5 538 aaPredicted RBP18.94■□□□□ 0.62
PPFIA1-222ENST00000532504 PIK3R4Q99570 1358 aa18.94■□□□□ 0.62
PPFIA1-222ENST00000532504 GOLGA6L6A8MZA4 724 aa18.94■□□□□ 0.62
PPFIA1-222ENST00000532504 NACAP1Q9BZK3 213 aa18.94■□□□□ 0.62
PPFIA1-222ENST00000532504 QTRT2Q9H974 415 aaKnown RBP18.94■□□□□ 0.62
PPFIA1-222ENST00000532504 POLR3AO14802 1390 aaPredicted RBP18.93■□□□□ 0.62
PPFIA1-222ENST00000532504 PARD3Q8TEW0 1356 aa18.93■□□□□ 0.62
PPFIA1-222ENST00000532504 AKAP2Q9Y2D5 859 aa18.93■□□□□ 0.62
PPFIA1-222ENST00000532504 ZFYVE9O95405 1425 aa18.93■□□□□ 0.62
PPFIA1-222ENST00000532504 C22orf23Q9BZE7 217 aa18.93■□□□□ 0.62
PPFIA1-222ENST00000532504 PIK3C2GO75747 1445 aa18.93■□□□□ 0.62
PPFIA1-222ENST00000532504 IL13P35225 146 aa18.93■□□□□ 0.62
PPFIA1-222ENST00000532504 SART3Q15020 963 aaKnown RBP18.93■□□□□ 0.62
PPFIA1-222ENST00000532504 CCAR1Q8IX12 1150 aaKnown RBP18.93■□□□□ 0.62
PPFIA1-222ENST00000532504 DRC7Q8IY82 874 aa18.93■□□□□ 0.62
PPFIA1-222ENST00000532504 RSPH6AQ9H0K4 717 aa18.93■□□□□ 0.62
PPFIA1-222ENST00000532504 KIF1BPQ96EK5 621 aa18.92■□□□□ 0.62
PPFIA1-222ENST00000532504 LGR6Q9HBX8 967 aa18.92■□□□□ 0.62
PPFIA1-222ENST00000532504 PTPRCP08575 1304 aa18.92■□□□□ 0.62
PPFIA1-222ENST00000532504 CDC5LQ99459 802 aaKnown RBP18.92■□□□□ 0.62
PPFIA1-222ENST00000532504 BOLA2Q9H3K6 86 aa18.92■□□□□ 0.62
PPFIA1-222ENST00000532504 APBA3O96018 575 aa18.92■□□□□ 0.62
PPFIA1-222ENST00000532504 IPO9Q96P70 1041 aaKnown RBP18.92■□□□□ 0.62
PPFIA1-222ENST00000532504 VPS37CA5D8V6 355 aaPredicted RBP18.91■□□□□ 0.62
PPFIA1-222ENST00000532504 ZSCAN25Q6NSZ9 544 aa18.91■□□□□ 0.62
PPFIA1-222ENST00000532504 IL16Q14005 1332 aa18.91■□□□□ 0.62
PPFIA1-222ENST00000532504 TMOD2Q9NZR1 351 aa18.91■□□□□ 0.62
PPFIA1-222ENST00000532504 TDO2P48775 406 aa18.9■□□□□ 0.62
PPFIA1-222ENST00000532504 CWC27Q6UX04 472 aaKnown RBP18.9■□□□□ 0.62
PPFIA1-222ENST00000532504 TSHZ2Q9NRE2 1034 aa18.9■□□□□ 0.62
PPFIA1-222ENST00000532504 CDC42BPAQ5VT25 1732 aa18.9■□□□□ 0.62
PPFIA1-222ENST00000532504 POLD1P28340 1107 aa18.89■□□□□ 0.62
PPFIA1-222ENST00000532504 TSPYL6Q8N831 410 aa18.89■□□□□ 0.62
PPFIA1-222ENST00000532504 GCC2Q8IWJ2 1684 aa18.89■□□□□ 0.61
PPFIA1-222ENST00000532504 SLC5A1P13866 664 aa18.89■□□□□ 0.61
PPFIA1-222ENST00000532504 PTPRTO14522 1441 aa18.89■□□□□ 0.61
PPFIA1-222ENST00000532504 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.89■□□□□ 0.61
PPFIA1-222ENST00000532504 PSMA5P28066 241 aa18.89■□□□□ 0.61
PPFIA1-222ENST00000532504 CSPP1Q1MSJ5 1256 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms