RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 RTCBQ9Y3I0 505 aaKnown RBP13.46□□□□□ -0.25
PTPRK-221ENST00000532331 CCDC70Q6NSX1 233 aa13.46□□□□□ -0.25
PTPRK-221ENST00000532331 CCDC69A6NI79 296 aa13.46□□□□□ -0.26
PTPRK-221ENST00000532331 POLR3DP05423 398 aaPredicted RBP13.46□□□□□ -0.26
PTPRK-221ENST00000532331 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.45□□□□□ -0.26
PTPRK-221ENST00000532331 C16orf71Q8IYS4 520 aaPredicted RBP13.45□□□□□ -0.26
PTPRK-221ENST00000532331 CWC25Q9NXE8 425 aaPredicted RBP13.45□□□□□ -0.26
PTPRK-221ENST00000532331 USP21Q9UK80 565 aa13.45□□□□□ -0.26
PTPRK-221ENST00000532331 SOGA3Q5TF21 947 aa13.45□□□□□ -0.26
PTPRK-221ENST00000532331 CCAR2Q8N163 923 aaKnown RBP13.45□□□□□ -0.26
PTPRK-221ENST00000532331 DNAJC5Q9H3Z4 198 aa13.45□□□□□ -0.26
PTPRK-221ENST00000532331 MAP4K4O95819 1239 aaPredicted RBP13.45□□□□□ -0.26
PTPRK-221ENST00000532331 CTNNA3Q9UI47 895 aa13.45□□□□□ -0.26
PTPRK-221ENST00000532331 PDZRN3Q9UPQ7 1066 aa13.45□□□□□ -0.26
PTPRK-221ENST00000532331 MVPQ14764 893 aaKnown RBP13.44□□□□□ -0.26
PTPRK-221ENST00000532331 RPAP2Q8IXW5 612 aaPredicted RBP13.44□□□□□ -0.26
PTPRK-221ENST00000532331 SHANK2Q9UPX8 1470 aa13.44□□□□□ -0.26
PTPRK-221ENST00000532331 UBAC1Q9BSL1 405 aa13.44□□□□□ -0.26
PTPRK-221ENST00000532331 CFAP74Q9C0B2 1584 aa13.44□□□□□ -0.26
PTPRK-221ENST00000532331 IL1RAPL2Q9NP60 686 aa13.44□□□□□ -0.26
PTPRK-221ENST00000532331 AKAP4Q5JQC9 854 aa13.43□□□□□ -0.26
PTPRK-221ENST00000532331 CDK5RAP3Q96JB5 506 aa13.43□□□□□ -0.26
PTPRK-221ENST00000532331 NUP133Q8WUM0 1156 aa13.43□□□□□ -0.26
PTPRK-221ENST00000532331 TRIM22Q8IYM9 498 aa13.43□□□□□ -0.26
PTPRK-221ENST00000532331 MYO1BO43795 1136 aa13.43□□□□□ -0.26
PTPRK-221ENST00000532331 ORAI2Q96SN7 254 aa13.43□□□□□ -0.26
PTPRK-221ENST00000532331 CLEC11AQ9Y240 323 aa13.43□□□□□ -0.26
PTPRK-221ENST00000532331 DISP3Q9P2K9 1392 aa13.42□□□□□ -0.26
PTPRK-221ENST00000532331 MCM2P49736 904 aa13.42□□□□□ -0.26
PTPRK-221ENST00000532331 CCDC152Q4G0S7 254 aa13.42□□□□□ -0.26
PTPRK-221ENST00000532331 MAP3K2Q9Y2U5 619 aa13.42□□□□□ -0.26
PTPRK-221ENST00000532331 ATP2B1P20020 1258 aa13.42□□□□□ -0.26
PTPRK-221ENST00000532331 FBLN1P23142 703 aa13.42□□□□□ -0.26
PTPRK-221ENST00000532331 PCDH11XQ9BZA7 1347 aa13.42□□□□□ -0.26
PTPRK-221ENST00000532331 PCDH11YQ9BZA8 1340 aa13.42□□□□□ -0.26
PTPRK-221ENST00000532331 ABCC1P33527 1531 aa13.42□□□□□ -0.26
PTPRK-221ENST00000532331 YTHDC2Q9H6S0 1430 aaKnown RBP13.41□□□□□ -0.26
PTPRK-221ENST00000532331 ATP5J2-PTCD1G3V325 749 aa13.41□□□□□ -0.26
PTPRK-221ENST00000532331 MAP3K12Q12852 859 aa13.41□□□□□ -0.26
PTPRK-221ENST00000532331 NLRP3Q96P20 1036 aa13.41□□□□□ -0.26
PTPRK-221ENST00000532331 FLT4P35916 1363 aa13.41□□□□□ -0.26
PTPRK-221ENST00000532331 BAG6P46379 1132 aa13.41□□□□□ -0.26
PTPRK-221ENST00000532331 ALDH1L2Q3SY69 923 aa13.41□□□□□ -0.26
PTPRK-221ENST00000532331 KIF1BPQ96EK5 621 aa13.41□□□□□ -0.26
PTPRK-221ENST00000532331 NYXQ9GZU5 481 aa13.41□□□□□ -0.26
PTPRK-221ENST00000532331 FAM98CQ17RN3 349 aaKnown RBP13.41□□□□□ -0.26
PTPRK-221ENST00000532331 SIRT1Q96EB6 747 aa13.41□□□□□ -0.26
PTPRK-221ENST00000532331 LDHAL6AQ6ZMR3 332 aa13.41□□□□□ -0.26
PTPRK-221ENST00000532331 MKNK2Q9HBH9 465 aa13.41□□□□□ -0.26
PTPRK-221ENST00000532331 ARHGEF10O15013 1369 aa13.41□□□□□ -0.26
PTPRK-221ENST00000532331 ZNF592Q92610 1267 aa13.4□□□□□ -0.26
PTPRK-221ENST00000532331 NEK4P51957 841 aa13.4□□□□□ -0.26
PTPRK-221ENST00000532331 RAB11FIP3O75154 756 aa13.4□□□□□ -0.26
PTPRK-221ENST00000532331 NIP7Q9Y221 180 aaKnown RBP eCLIP13.4□□□□□ -0.26
PTPRK-221ENST00000532331 NPATQ14207 1427 aa13.4□□□□□ -0.26
PTPRK-221ENST00000532331 SLC39A6Q13433 755 aa13.4□□□□□ -0.26
PTPRK-221ENST00000532331 RABEP1Q15276 862 aa13.4□□□□□ -0.26
PTPRK-221ENST00000532331 LDHCP07864 332 aa13.39□□□□□ -0.27
PTPRK-221ENST00000532331 FLIIQ13045 1269 aa13.39□□□□□ -0.27
PTPRK-221ENST00000532331 TMEM2Q9UHN6 1383 aa13.39□□□□□ -0.27
PTPRK-221ENST00000532331 PDCP20941 246 aa13.39□□□□□ -0.27
PTPRK-221ENST00000532331 TXLNAP40222 546 aa13.39□□□□□ -0.27
PTPRK-221ENST00000532331 SLFN5Q08AF3 891 aa13.39□□□□□ -0.27
PTPRK-221ENST00000532331 WDR78Q5VTH9 848 aa13.39□□□□□ -0.27
PTPRK-221ENST00000532331 OLFM4Q6UX06 510 aa13.39□□□□□ -0.27
PTPRK-221ENST00000532331 ANKRD13DQ6ZTN6 518 aa13.39□□□□□ -0.27
PTPRK-221ENST00000532331 F6X3S4 739 aa13.39□□□□□ -0.27
PTPRK-221ENST00000532331 KRT18P05783 430 aaKnown RBP13.39□□□□□ -0.27
PTPRK-221ENST00000532331 HOMER1Q86YM7 354 aa13.39□□□□□ -0.27
PTPRK-221ENST00000532331 NAT10Q9H0A0 1025 aaKnown RBP13.39□□□□□ -0.27
PTPRK-221ENST00000532331 HDAC9Q9UKV0 1011 aa13.39□□□□□ -0.27
PTPRK-221ENST00000532331 GPS2Q13227 327 aa13.39□□□□□ -0.27
PTPRK-221ENST00000532331 TRAPPC3LQ5T215 181 aa13.39□□□□□ -0.27
PTPRK-221ENST00000532331 TPTE2Q6XPS3 522 aa13.39□□□□□ -0.27
PTPRK-221ENST00000532331 TCOF1Q13428 1488 aaKnown RBP13.39□□□□□ -0.27
PTPRK-221ENST00000532331 DCAF5Q96JK2 942 aa13.38□□□□□ -0.27
PTPRK-221ENST00000532331 SDF4Q9BRK5 362 aa13.38□□□□□ -0.27
PTPRK-221ENST00000532331 ZRANB1Q9UGI0 708 aa13.38□□□□□ -0.27
PTPRK-221ENST00000532331 CYP46A1Q9Y6A2 500 aa13.38□□□□□ -0.27
PTPRK-221ENST00000532331 ANKRD18AQ8IVF6 992 aa13.38□□□□□ -0.27
PTPRK-221ENST00000532331 TMEM57Q8N5G2 664 aa13.38□□□□□ -0.27
PTPRK-221ENST00000532331 CCNL1Q9UK58 526 aaPredicted RBP13.38□□□□□ -0.27
PTPRK-221ENST00000532331 FAM83GA6ND36 823 aa13.38□□□□□ -0.27
PTPRK-221ENST00000532331 NUTM1Q86Y26 1132 aa13.38□□□□□ -0.27
PTPRK-221ENST00000532331 IP6K1Q92551 441 aa13.38□□□□□ -0.27
PTPRK-221ENST00000532331 IMMTQ16891 758 aaKnown RBP13.38□□□□□ -0.27
PTPRK-221ENST00000532331 DZIP3Q86Y13 1208 aaKnown RBP13.38□□□□□ -0.27
PTPRK-221ENST00000532331 EXOC6BQ9Y2D4 811 aa13.38□□□□□ -0.27
PTPRK-221ENST00000532331 EIF4A2Q14240 407 aaKnown RBP13.37□□□□□ -0.27
PTPRK-221ENST00000532331 WWC3Q9ULE0 1092 aa13.37□□□□□ -0.27
PTPRK-221ENST00000532331 PTPRKQ15262 1439 aa13.37□□□□□ -0.27
PTPRK-221ENST00000532331 MINDY4BA8MYZ0 360 aa13.37□□□□□ -0.27
PTPRK-221ENST00000532331 GNPATO15228 680 aa13.37□□□□□ -0.27
PTPRK-221ENST00000532331 ZNF76P36508 570 aa13.37□□□□□ -0.27
PTPRK-221ENST00000532331 SPTY2D1Q68D10 685 aaPredicted RBP13.37□□□□□ -0.27
PTPRK-221ENST00000532331 UBE3BQ7Z3V4 1068 aa13.37□□□□□ -0.27
PTPRK-221ENST00000532331 JDP2Q8WYK2 163 aa13.37□□□□□ -0.27
PTPRK-221ENST00000532331 PIK3R4Q99570 1358 aa13.37□□□□□ -0.27
PTPRK-221ENST00000532331 ANKRD1Q15327 319 aa13.37□□□□□ -0.27
PTPRK-221ENST00000532331 PUS7Q96PZ0 661 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms