RNA–Protein interactions for RNA: ENST00000531114.5

PDZD3-212, Transcript of PDZ domain containing 3, humanhuman

TSL 2 BASIC

Gene PDZD3, Length 2,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-212ENST00000531114 DCTPP1Q9H773 170 aa19.14■□□□□ 0.66
PDZD3-212ENST00000531114 SLKQ9H2G2 1235 aaPredicted RBP19.14■□□□□ 0.65
PDZD3-212ENST00000531114 PRAMEF22A3QJZ6 481 aa19.14■□□□□ 0.65
PDZD3-212ENST00000531114 C22orf23Q9BZE7 217 aa19.14■□□□□ 0.65
PDZD3-212ENST00000531114 BTBD11A6QL63 1104 aa19.13■□□□□ 0.65
PDZD3-212ENST00000531114 EIF4A1P60842 406 aaKnown RBP19.13■□□□□ 0.65
PDZD3-212ENST00000531114 NFKBIBQ15653 356 aa19.13■□□□□ 0.65
PDZD3-212ENST00000531114 ATP10DQ9P241 1426 aa19.13■□□□□ 0.65
PDZD3-212ENST00000531114 C1orf141Q5JVX7 400 aa19.12■□□□□ 0.65
PDZD3-212ENST00000531114 ZMYND15Q9H091 742 aa19.12■□□□□ 0.65
PDZD3-212ENST00000531114 RGPD2P0DJD1 1756 aa19.12■□□□□ 0.65
PDZD3-212ENST00000531114 PXDNQ92626 1479 aa19.12■□□□□ 0.65
PDZD3-212ENST00000531114 AKAP4Q5JQC9 854 aa19.11■□□□□ 0.65
PDZD3-212ENST00000531114 CHPF2Q9P2E5 772 aa19.11■□□□□ 0.65
PDZD3-212ENST00000531114 CSB-PGBD3P0DP91 1061 aa19.11■□□□□ 0.65
PDZD3-212ENST00000531114 USP35Q9P2H5 1018 aa19.11■□□□□ 0.65
PDZD3-212ENST00000531114 EXOC6BQ9Y2D4 811 aa19.11■□□□□ 0.65
PDZD3-212ENST00000531114 RPAP2Q8IXW5 612 aaPredicted RBP19.11■□□□□ 0.65
PDZD3-212ENST00000531114 CEMIPQ8WUJ3 1361 aa19.1■□□□□ 0.65
PDZD3-212ENST00000531114 RNMTO43148 476 aaKnown RBP19.1■□□□□ 0.65
PDZD3-212ENST00000531114 CCT4P50991 539 aaKnown RBP19.1■□□□□ 0.65
PDZD3-212ENST00000531114 PLEKHM2Q8IWE5 1019 aa19.1■□□□□ 0.65
PDZD3-212ENST00000531114 GSPT1P15170 499 aaKnown RBP19.1■□□□□ 0.65
PDZD3-212ENST00000531114 MST1RQ04912 1400 aa19.1■□□□□ 0.65
PDZD3-212ENST00000531114 ERBB3P21860 1342 aa19.09■□□□□ 0.65
PDZD3-212ENST00000531114 BMP2KLQ5H9B9 411 aa19.09■□□□□ 0.65
PDZD3-212ENST00000531114 ARXQ96QS3 562 aa19.09■□□□□ 0.65
PDZD3-212ENST00000531114 TBC1D2Q9BYX2 928 aa19.09■□□□□ 0.65
PDZD3-212ENST00000531114 PNMA6EA0A0J9YXQ4 647 aa19.08■□□□□ 0.65
PDZD3-212ENST00000531114 SLC39A6Q13433 755 aa19.08■□□□□ 0.65
PDZD3-212ENST00000531114 TSHZ3Q63HK5 1081 aa19.08■□□□□ 0.65
PDZD3-212ENST00000531114 TBC1D9Q6ZT07 1266 aa19.08■□□□□ 0.64
PDZD3-212ENST00000531114 LRRFIP2Q9Y608 721 aaKnown RBP19.08■□□□□ 0.64
PDZD3-212ENST00000531114 CADPS2Q86UW7 1296 aa19.07■□□□□ 0.64
PDZD3-212ENST00000531114 GNAI2P04899 355 aa19.07■□□□□ 0.64
PDZD3-212ENST00000531114 PROSER3Q2NL68 480 aa19.07■□□□□ 0.64
PDZD3-212ENST00000531114 AMOTQ4VCS5 1084 aa19.07■□□□□ 0.64
PDZD3-212ENST00000531114 USP54Q70EL1 1684 aa19.06■□□□□ 0.64
PDZD3-212ENST00000531114 PI4KAP2A4QPH2 592 aa19.05■□□□□ 0.64
PDZD3-212ENST00000531114 PI4KAP1Q8N8J0 262 aa19.05■□□□□ 0.64
PDZD3-212ENST00000531114 RAPGEF4Q8WZA2 1011 aa19.05■□□□□ 0.64
PDZD3-212ENST00000531114 USP44Q9H0E7 712 aa19.05■□□□□ 0.64
PDZD3-212ENST00000531114 BECN1Q14457 450 aa19.05■□□□□ 0.64
PDZD3-212ENST00000531114 ZNF335Q9H4Z2 1342 aaPredicted RBP19.04■□□□□ 0.64
PDZD3-212ENST00000531114 VIRMAQ69YN4 1812 aaKnown RBP19.04■□□□□ 0.64
PDZD3-212ENST00000531114 STRCP1A6NGW2 1772 aa19.04■□□□□ 0.64
PDZD3-212ENST00000531114 KDM4FA0A1W2PPD8 638 aa19.04■□□□□ 0.64
PDZD3-212ENST00000531114 NPHP3Q7Z494 1330 aa19.04■□□□□ 0.64
PDZD3-212ENST00000531114 SLIT3O75094 1523 aa19.03■□□□□ 0.64
PDZD3-212ENST00000531114 FRAT2O75474 233 aaPredicted RBP19.03■□□□□ 0.64
PDZD3-212ENST00000531114 BABAM1Q9NWV8 329 aa19.03■□□□□ 0.64
PDZD3-212ENST00000531114 MED1Q15648 1581 aaPredicted RBP19.03■□□□□ 0.64
PDZD3-212ENST00000531114 BRINP3Q76B58 766 aa19.02■□□□□ 0.64
PDZD3-212ENST00000531114 NFATC2IPQ8NCF5 419 aa19.02■□□□□ 0.64
PDZD3-212ENST00000531114 LRRC37A3O60309 1634 aa19.02■□□□□ 0.64
PDZD3-212ENST00000531114 HMMRO75330 724 aa19.02■□□□□ 0.63
PDZD3-212ENST00000531114 NBPF7P0C2Y1 421 aaPredicted RBP19.02■□□□□ 0.63
PDZD3-212ENST00000531114 PIP4K2AP48426 406 aaPredicted RBP19.02■□□□□ 0.63
PDZD3-212ENST00000531114 AIMP1Q12904 312 aaKnown RBP19.02■□□□□ 0.63
PDZD3-212ENST00000531114 UBTFL1P0CB47 393 aaPredicted RBP19.01■□□□□ 0.63
PDZD3-212ENST00000531114 TTC22Q5TAA0 569 aa19.01■□□□□ 0.63
PDZD3-212ENST00000531114 RBM42Q9BTD8 480 aaKnown RBP19.01■□□□□ 0.63
PDZD3-212ENST00000531114 TRPM3Q9HCF6 1732 aaPredicted RBP19■□□□□ 0.63
PDZD3-212ENST00000531114 GIGYF1O75420 1035 aaPredicted RBP19■□□□□ 0.63
PDZD3-212ENST00000531114 GNAI3P08754 354 aa19■□□□□ 0.63
PDZD3-212ENST00000531114 SRCIN1Q9C0H9 1055 aa19■□□□□ 0.63
PDZD3-212ENST00000531114 TATP17735 454 aaPredicted RBP18.99■□□□□ 0.63
PDZD3-212ENST00000531114 SDSP20132 328 aa18.99■□□□□ 0.63
PDZD3-212ENST00000531114 IL1RAPL2Q9NP60 686 aa18.99■□□□□ 0.63
PDZD3-212ENST00000531114 SPATA31A3Q5VYP0 1347 aa18.99■□□□□ 0.63
PDZD3-212ENST00000531114 RGPD5Q99666 1765 aa18.98■□□□□ 0.63
PDZD3-212ENST00000531114 DNAAF4Q8WXU2 420 aa18.98■□□□□ 0.63
PDZD3-212ENST00000531114 CDC45O75419 566 aa18.98■□□□□ 0.63
PDZD3-212ENST00000531114 ATP8B2P98198 1209 aa18.98■□□□□ 0.63
PDZD3-212ENST00000531114 MYL6BP14649 208 aa18.97■□□□□ 0.63
PDZD3-212ENST00000531114 CYP27B1O15528 508 aa18.96■□□□□ 0.63
PDZD3-212ENST00000531114 CWF19L2Q2TBE0 894 aaKnown RBP18.96■□□□□ 0.63
PDZD3-212ENST00000531114 PPP1R42Q7Z4L9 355 aa18.96■□□□□ 0.63
PDZD3-212ENST00000531114 MAP3K2Q9Y2U5 619 aa18.96■□□□□ 0.63
PDZD3-212ENST00000531114 PHKG2P15735 406 aa18.96■□□□□ 0.63
PDZD3-212ENST00000531114 BEND3Q5T5X7 828 aa18.96■□□□□ 0.63
PDZD3-212ENST00000531114 RRAGDQ9NQL2 400 aaPredicted RBP18.96■□□□□ 0.63
PDZD3-212ENST00000531114 SLAIN2Q9P270 581 aa18.96■□□□□ 0.63
PDZD3-212ENST00000531114 PRDM11Q9NQV5 511 aa18.96■□□□□ 0.63
PDZD3-212ENST00000531114 DBF4Q9UBU7 674 aaPredicted RBP18.96■□□□□ 0.63
PDZD3-212ENST00000531114 MEGF6O75095 1541 aa18.95■□□□□ 0.62
PDZD3-212ENST00000531114 CD2BP2O95400 341 aaKnown RBP18.95■□□□□ 0.62
PDZD3-212ENST00000531114 KIF2CQ99661 725 aa18.95■□□□□ 0.62
PDZD3-212ENST00000531114 FOXD4L1Q9NU39 408 aa18.95■□□□□ 0.62
PDZD3-212ENST00000531114 ADCY9O60503 1353 aa18.94■□□□□ 0.62
PDZD3-212ENST00000531114 PDE1AP54750 535 aa18.94■□□□□ 0.62
PDZD3-212ENST00000531114 TNS3Q68CZ2 1445 aa18.94■□□□□ 0.62
PDZD3-212ENST00000531114 ZNF790Q6PG37 636 aa18.94■□□□□ 0.62
PDZD3-212ENST00000531114 SURF6O75683 361 aaKnown RBP18.94■□□□□ 0.62
PDZD3-212ENST00000531114 RBM25P49756 843 aaKnown RBP18.94■□□□□ 0.62
PDZD3-212ENST00000531114 LRRCC1Q9C099 1032 aa18.94■□□□□ 0.62
PDZD3-212ENST00000531114 SRGAP3O43295 1099 aa18.93■□□□□ 0.62
PDZD3-212ENST00000531114 ZNF496Q96IT1 587 aaPredicted RBP18.93■□□□□ 0.62
PDZD3-212ENST00000531114 SLC52A2Q9HAB3 445 aa18.93■□□□□ 0.62
PDZD3-212ENST00000531114 FAM208AQ9UK61 1670 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms