RNA–Protein interactions for RNA: ENST00000527374.1

AP003080.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP003080.1, Length 2,371 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003080.1-201ENST00000527374 KDM6AO15550 1401 aaPredicted RBP12.74□□□□□ -0.37
AP003080.1-201ENST00000527374 NEFMP07197 916 aa12.74□□□□□ -0.37
AP003080.1-201ENST00000527374 RUNDC1Q96C34 613 aa12.74□□□□□ -0.37
AP003080.1-201ENST00000527374 NEUROD2Q15784 382 aa12.73□□□□□ -0.37
AP003080.1-201ENST00000527374 DCAF5Q96JK2 942 aa12.73□□□□□ -0.37
AP003080.1-201ENST00000527374 NHSQ6T4R5 1651 aa12.73□□□□□ -0.37
AP003080.1-201ENST00000527374 SCN11AQ9UI33 1791 aa12.73□□□□□ -0.37
AP003080.1-201ENST00000527374 TNS1Q9HBL0 1735 aaKnown RBP12.73□□□□□ -0.37
AP003080.1-201ENST00000527374 GNAT3A8MTJ3 354 aa12.73□□□□□ -0.37
AP003080.1-201ENST00000527374 DCTN1Q14203 1278 aa12.73□□□□□ -0.37
AP003080.1-201ENST00000527374 IL17REQ8NFR9 667 aa12.73□□□□□ -0.37
AP003080.1-201ENST00000527374 MAP3K5Q99683 1374 aa12.72□□□□□ -0.37
AP003080.1-201ENST00000527374 BCL11BQ9C0K0 894 aaPredicted RBP12.72□□□□□ -0.37
AP003080.1-201ENST00000527374 BTAF1O14981 1849 aa12.72□□□□□ -0.37
AP003080.1-201ENST00000527374 APAF1O14727 1248 aa12.72□□□□□ -0.37
AP003080.1-201ENST00000527374 RNMTO43148 476 aaKnown RBP12.72□□□□□ -0.37
AP003080.1-201ENST00000527374 NFE2L2Q16236 605 aa12.72□□□□□ -0.37
AP003080.1-201ENST00000527374 MCM10Q7L590 875 aa12.72□□□□□ -0.37
AP003080.1-201ENST00000527374 DEFB132Q7Z7B7 95 aa12.72□□□□□ -0.37
AP003080.1-201ENST00000527374 APBA3O96018 575 aa12.71□□□□□ -0.37
AP003080.1-201ENST00000527374 HSP90AB1P08238 724 aaKnown RBP12.71□□□□□ -0.37
AP003080.1-201ENST00000527374 TMPOP42166 694 aaKnown RBP12.71□□□□□ -0.37
AP003080.1-201ENST00000527374 NFATC2IPQ8NCF5 419 aa12.71□□□□□ -0.37
AP003080.1-201ENST00000527374 SOCS7O14512 581 aa12.71□□□□□ -0.38
AP003080.1-201ENST00000527374 RIPK4P57078 832 aa12.71□□□□□ -0.38
AP003080.1-201ENST00000527374 PIGBQ92521 554 aa12.71□□□□□ -0.38
AP003080.1-201ENST00000527374 ADAMTS7Q9UKP4 1686 aa12.7□□□□□ -0.38
AP003080.1-201ENST00000527374 CABP4P57796 275 aa12.7□□□□□ -0.38
AP003080.1-201ENST00000527374 EN1Q05925 392 aaPredicted RBP12.7□□□□□ -0.38
AP003080.1-201ENST00000527374 SF3B2Q13435 895 aaKnown RBP12.7□□□□□ -0.38
AP003080.1-201ENST00000527374 THUMPD2Q9BTF0 503 aaKnown RBP12.7□□□□□ -0.38
AP003080.1-201ENST00000527374 ERVV-2B6SEH9 535 aa12.69□□□□□ -0.38
AP003080.1-201ENST00000527374 CCDC125Q86Z20 511 aa12.69□□□□□ -0.38
AP003080.1-201ENST00000527374 TMOD3Q9NYL9 352 aa12.69□□□□□ -0.38
AP003080.1-201ENST00000527374 RTF1Q92541 710 aaKnown RBP12.69□□□□□ -0.38
AP003080.1-201ENST00000527374 SLC52A2Q9HAB3 445 aa12.68□□□□□ -0.38
AP003080.1-201ENST00000527374 ASAP1Q9ULH1 1129 aa12.68□□□□□ -0.38
AP003080.1-201ENST00000527374 SALL2Q9Y467 1007 aaPredicted RBP12.68□□□□□ -0.38
AP003080.1-201ENST00000527374 TRIM35Q9UPQ4 493 aa12.67□□□□□ -0.38
AP003080.1-201ENST00000527374 CEMIPQ8WUJ3 1361 aa12.67□□□□□ -0.38
AP003080.1-201ENST00000527374 KCNQ4P56696 695 aa12.66□□□□□ -0.38
AP003080.1-201ENST00000527374 EZH2Q15910 746 aaKnown RBP12.66□□□□□ -0.38
AP003080.1-201ENST00000527374 SIPA1L3O60292 1781 aaPredicted RBP12.66□□□□□ -0.38
AP003080.1-201ENST00000527374 HTATSF1O43719 755 aaKnown RBP12.66□□□□□ -0.38
AP003080.1-201ENST00000527374 BAG6P46379 1132 aa12.66□□□□□ -0.38
AP003080.1-201ENST00000527374 TEFQ10587 303 aa12.66□□□□□ -0.38
AP003080.1-201ENST00000527374 SLC39A6Q13433 755 aa12.66□□□□□ -0.38
AP003080.1-201ENST00000527374 PROM2Q8N271 834 aa12.66□□□□□ -0.38
AP003080.1-201ENST00000527374 ATG3Q9NT62 314 aa12.66□□□□□ -0.38
AP003080.1-201ENST00000527374 CAMKK2Q96RR4 588 aa12.65□□□□□ -0.38
AP003080.1-201ENST00000527374 MRC1P22897 1456 aa12.65□□□□□ -0.38
AP003080.1-201ENST00000527374 PLSCR1O15162 318 aa12.65□□□□□ -0.38
AP003080.1-201ENST00000527374 MIS18AQ9NYP9 233 aa12.65□□□□□ -0.38
AP003080.1-201ENST00000527374 VASPP50552 380 aaPredicted RBP12.64□□□□□ -0.39
AP003080.1-201ENST00000527374 IFNLR1Q8IU57 520 aaPredicted RBP12.64□□□□□ -0.39
AP003080.1-201ENST00000527374 PALLDQ8WX93 1383 aa12.63□□□□□ -0.39
AP003080.1-201ENST00000527374 LY75O60449 1722 aa12.63□□□□□ -0.39
AP003080.1-201ENST00000527374 TXNRD1Q16881 649 aa12.63□□□□□ -0.39
AP003080.1-201ENST00000527374 KCNQ3O43525 872 aa12.63□□□□□ -0.39
AP003080.1-201ENST00000527374 PTCD1O75127 700 aaKnown RBP12.63□□□□□ -0.39
AP003080.1-201ENST00000527374 LRRC4BQ9NT99 713 aa12.63□□□□□ -0.39
AP003080.1-201ENST00000527374 BTBD11A6QL63 1104 aa12.62□□□□□ -0.39
AP003080.1-201ENST00000527374 LMOD3Q0VAK6 560 aa12.62□□□□□ -0.39
AP003080.1-201ENST00000527374 TAF7Q15545 349 aaPredicted RBP12.62□□□□□ -0.39
AP003080.1-201ENST00000527374 SLC4A9Q96Q91 983 aa12.62□□□□□ -0.39
AP003080.1-201ENST00000527374 WWC1Q8IX03 1113 aa12.61□□□□□ -0.39
AP003080.1-201ENST00000527374 RBM42Q9BTD8 480 aaKnown RBP12.61□□□□□ -0.39
AP003080.1-201ENST00000527374 RGPD3A6NKT7 1758 aaPredicted RBP12.61□□□□□ -0.39
AP003080.1-201ENST00000527374 RGPD4Q7Z3J3 1758 aa12.61□□□□□ -0.39
AP003080.1-201ENST00000527374 PAPPAQ13219 1627 aa12.61□□□□□ -0.39
AP003080.1-201ENST00000527374 ZNF790Q6PG37 636 aa12.61□□□□□ -0.39
AP003080.1-201ENST00000527374 SMARCC1Q92922 1105 aaPredicted RBP12.61□□□□□ -0.39
AP003080.1-201ENST00000527374 LAS1LQ9Y4W2 734 aaKnown RBP12.61□□□□□ -0.39
AP003080.1-201ENST00000527374 LOC102724428A0A0B4J2F2 783 aa12.6□□□□□ -0.39
AP003080.1-201ENST00000527374 SIK1P57059 783 aa12.6□□□□□ -0.39
AP003080.1-201ENST00000527374 CCNL1Q9UK58 526 aaPredicted RBP12.6□□□□□ -0.39
AP003080.1-201ENST00000527374 RREB1Q92766 1687 aa12.6□□□□□ -0.39
AP003080.1-201ENST00000527374 UBR2Q8IWV8 1755 aa12.59□□□□□ -0.39
AP003080.1-201ENST00000527374 NUP188Q5SRE5 1749 aa12.59□□□□□ -0.39
AP003080.1-201ENST00000527374 CCDC27Q2M243 656 aa12.59□□□□□ -0.39
AP003080.1-201ENST00000527374 ZNF496Q96IT1 587 aaPredicted RBP12.59□□□□□ -0.39
AP003080.1-201ENST00000527374 BCL11AQ9H165 835 aa12.59□□□□□ -0.39
AP003080.1-201ENST00000527374 KCPQ6ZWJ8 1503 aa12.59□□□□□ -0.39
AP003080.1-201ENST00000527374 ATP6V1AP38606 617 aa12.58□□□□□ -0.4
AP003080.1-201ENST00000527374 ITPK1Q13572 414 aa12.58□□□□□ -0.4
AP003080.1-201ENST00000527374 TTC5Q8N0Z6 440 aa12.58□□□□□ -0.4
AP003080.1-201ENST00000527374 TAF1LQ8IZX4 1826 aa12.58□□□□□ -0.4
AP003080.1-201ENST00000527374 KDM3BQ7LBC6 1761 aa12.58□□□□□ -0.4
AP003080.1-201ENST00000527374 SLC27A3Q5K4L6 730 aa12.57□□□□□ -0.4
AP003080.1-201ENST00000527374 TSPYL4Q9UJ04 414 aa12.57□□□□□ -0.4
AP003080.1-201ENST00000527374 PRAMEF22A3QJZ6 481 aa12.57□□□□□ -0.4
AP003080.1-201ENST00000527374 CHL1O00533 1208 aa12.57□□□□□ -0.4
AP003080.1-201ENST00000527374 CFAP44Q96MT7 982 aa12.56□□□□□ -0.4
AP003080.1-201ENST00000527374 ANO8Q9HCE9 1232 aaPredicted RBP12.56□□□□□ -0.4
AP003080.1-201ENST00000527374 SPINK5Q9NQ38 1064 aaPredicted RBP12.56□□□□□ -0.4
AP003080.1-201ENST00000527374 C5P01031 1676 aa12.56□□□□□ -0.4
AP003080.1-201ENST00000527374 LINC00116Q8NCU8 138 aa12.56□□□□□ -0.4
AP003080.1-201ENST00000527374 TJP1Q07157 1748 aa12.55□□□□□ -0.4
AP003080.1-201ENST00000527374 ZNF853P0CG23 659 aa12.55□□□□□ -0.4
AP003080.1-201ENST00000527374 HNRNPUQ00839 825 aaKnown RBP eCLIP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms